mRNA_M-pyrifera_M_contig80555.18865.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80555.18865.1
Unique NamemRNA_M-pyrifera_M_contig80555.18865.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A5A8DTF7_CAFRO (Chloride channel protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8DTF7_CAFRO)

HSP 1 Score: 254 bits (648), Expect = 2.360e-75
Identity = 138/278 (49.64%), Postives = 187/278 (67.27%), Query Frame = 1
Query:    4 PNAGVLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDSDYNKKDYAIPE--LSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTIMSSFDADLY 831
            P+A ++PG YALMGATASLGG++RMTISLTVIL+E TND+Q  +PIM++L+VSKWVGD FNISLYD+HVELKC+PFVEAAPS NM HL   +VM  P V + E   V  V+  L+  +HNGFPVI   PE                          K  GM++R+QL+ LL +R +G  ++A+ +V +DDF  S  + K   + E  + + DL   MDLRPF+N  P++++ + P+SRVFT+FRS+G RHL + D +++  GII+R+TIMSSF  DL+
Sbjct:  542 PDADIVPGTYALMGATASLGGVARMTISLTVILLETTNDVQFIMPIMIVLMVSKWVGDLFNISLYDLHVELKCMPFVEAAPSGNMYHLMARDVMAHPVVALREEETVGSVVQTLKGCAHNGFPVIRETPE------------------------GRKFVGMVVRNQLVVLLNRRAWGTTEEAIRRVHVDDFSTS-LSSKHVVLREDAVDDADLDSPMDLRPFMNPVPVTVQLQCPLSRVFTLFRSLGMRHLVVTDLNNEVQGIISRQTIMSSFQQDLF 794          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A812QLE0_9DINO (Chloride channel protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QLE0_9DINO)

HSP 1 Score: 238 bits (606), Expect = 1.520e-69
Identity = 131/279 (46.95%), Postives = 182/279 (65.23%), Query Frame = 1
Query:    4 PNAGVLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDF---LDSDYNKKDYAIPELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTIMSSFDADLY 831
            P+AGV+PG YA++GATASLGG++RMTISL VIL E TND+    P ML+LLVSKWVGD F I+LYD+HVEL+C+PFVE+ PS NM      +VM  P   + E+  V+ V+ LL++  HNGFPV+S                          ++  +  GM++R+QL+ +L+ R FG    A  ++ +DDF   L S     D  + +L+ EDLA  +DLRP +N  PI+++ + P+SRVFT+FRS+G RHL + DD ++PVGII+RK IMSS+D DL+
Sbjct:  503 PDAGVVPGTYAIIGATASLGGVARMTISLAVILTETTNDITFVTPTMLVLLVSKWVGDLFGIALYDLHVELQCMPFVESKPSGNMFASTAQDVMAHPVRMLTEMPPVKDVVRLLQTCRHNGFPVVST-------------------------AQPHRYVGMIMRNQLVVMLKHRAFG--PTAAQRLHVDDFATTLSSKTQSTD-GVADLAPEDLAAYLDLRPIMNPVPIAVQRQCPLSRVFTLFRSLGIRHLVVTDDANEPVGIISRKEIMSSYDQDLF 753          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A0L0D9Y4_THETB (Chloride channel protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9Y4_THETB)

HSP 1 Score: 219 bits (557), Expect = 1.350e-62
Identity = 139/293 (47.44%), Postives = 178/293 (60.75%), Query Frame = 1
Query:    4 PNAGVLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSG-KLQGMMLRSQLLTLLRKRVFGF------GKQALDKVQ---LDDFLD--------SDYNKKDYAIPELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTIMSSFDADL 828
            P+A +  GVYAL+GA  +LGGI+RMTISLTVIL+E TND+QM +P+M+ ++VSKWVGD FNISLYD+HVELKC+PFVE  P A +  L   ++M +P V +P +V V  V  +L STSHNGFPV++            A   +  L  PS  S S  +L G++LRS LL+LLR R F        G   LD  Q   +   LD        SD    D A   L   D    +DLRPFLNKAP  +  E P+ RV+  FRS+G RHL +VD+++ P GIITRK I + F  DL
Sbjct:  448 PSADIDSGVYALIGAATALGGITRMTISLTVILLETTNDIQMLLPLMVGVIVSKWVGDWFNISLYDLHVELKCIPFVENNPPAGLERLTARDIMVTPLVTLPHLVTVGAVYDVLVSTSHNGFPVVA--------HRASAPAPQQLLAPPSSPSSSDPRLVGIILRSHLLSLLRHRTFYHELDGPDGSPVLDLAQDASIPHVLDFAPSLSSTSDALATDLAGVALRPGDRDAFIDLRPFLNKAPFRVLLETPVPRVYRTFRSMGLRHLCVVDENNTPHGIITRKDIRTDFTVDL 732          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A6B2L9A7_9EUKA (Chloride channel protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9A7_9EUKA)

HSP 1 Score: 177 bits (449), Expect = 3.500e-50
Identity = 101/277 (36.46%), Postives = 153/277 (55.23%), Query Frame = 1
Query:    4 PNAGVLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDSDYNKKDYAIP-----ELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTIMSSFD 819
            P+     G +A +GA + LGG +RMTISL VIL+E T+++   +P+M  L++SKW+GD FN  +YDIH+ L+ +P +E   S +M  +  G +M  P +C   I  V ++ ++L+ TSHNGFP+                             +SGK+QG++LRSQL+TLL+++ F    + L     +    SD+ K     P     EL   D    +DL P++N  P  ++  AP  RVF +FR++G RHLP++D  S  VGIITR+ I+   D
Sbjct:   76 PSWNTTAGTFAFVGAASFLGGCTRMTISLCVILMETTSNITFGLPLMFTLIISKWIGDFFNRGIYDIHIHLRKIPILEWETSTDMKGITAGHMMAKPVICFNPIERVGKIYSVLKHTSHNGFPI---------------------------TEKSGKIQGLILRSQLITLLQQKAFQKDCKILSPSDREMIHLSDFGKSYPRYPGIETVELQHSDKDLYIDLIPYMNLTPFIIQQNAPGDRVFRLFRTMGLRHLPVIDGKSHVVGIITRRDIIKHED 325          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A6P5AP16_BRABE (Chloride channel protein n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AP16_BRABE)

HSP 1 Score: 181 bits (460), Expect = 1.410e-48
Identity = 104/266 (39.10%), Postives = 164/266 (61.65%), Query Frame = 1
Query:   22 PGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRS--TSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQ--ALDK-VQLDDFLDSDYNKKDYAIPELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTI 804
            PG+YALMGA A LGGI RMTISLTVIL+E T ++   +P+ML+LL++KWVGD FN  LYDIH+ L  +P +   P A  + +   +VM  P   + ++ +V R++  L+   ++HNGFPV+ VP E     D++                SG+ +G++LRS LL L+++++F    Q  A+ K +Q+ DF ++           +S E++   +DLRP++N AP ++  +A + RVF +FR++G RHL +V+ D+  +GI+TRK +
Sbjct:  525 PGIYALMGAAAQLGGIVRMTISLTVILMEATGNVSYGLPLMLVLLIAKWVGDIFNEGLYDIHIRLMSVPILGWEPPATSTTISARQVMSHPVTTLQQVEKVGRIVEALKEPHSNHNGFPVVDVPDET----DLVT---------------SGRFRGLILRSHLLVLIKRKMFLERSQTGAIRKNLQMKDFREAYPRFPSIHEINISPEEMECSIDLRPYMNPAPYTVSEDASLHRVFRLFRALGLRHLVVVNKDNLVMGIVTRKDL 771          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A0T6AWH6_9SCAR (Chloride channel protein (Fragment) n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6AWH6_9SCAR)

HSP 1 Score: 175 bits (443), Expect = 1.590e-48
Identity = 94/263 (35.74%), Postives = 155/263 (58.94%), Query Frame = 1
Query:   16 VLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDSDYNKKDYAIPELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTI 804
            V PG YAL+GA A LGGI RMTISLTVI++E T ++   +P+++ L+ +KW GD FN  +YD H++L  +P +   P    + +   EVM  P + +  +  V  ++ LL+ T++NGFPV+  P     V D             S  +  G ++G++LRSQL+ +L++++F    Q  D++    F D           ++SEE+    +DLRPF+N++P ++     + R+F +FR++G RHLPIV+D ++ +G++TRK +
Sbjct:  140 VNPGKYALIGAAAQLGGIVRMTISLTVIIMETTGNISFGLPLIVTLIAAKWTGDFFNEGIYDTHIQLNGVPLLPWDPPPLANKIYASEVMSHPVITLKTVENVGHIVELLKLTTYNGFPVVDPP-----VSD------------HSEVNTYGTIRGLILRSQLIVILQRKIFNECAQNWDEISSSIFRDEYPRYPTIDEVDISEEEKTYSVDLRPFMNRSPYTVLHSFTLPRMFRLFRALGLRHLPIVNDSNEVIGMVTRKDL 385          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: UPI001E2781AC (H(+)/Cl(-) exchange transporter 7 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2781AC)

HSP 1 Score: 181 bits (459), Expect = 1.900e-48
Identity = 100/268 (37.31%), Postives = 161/268 (60.07%), Query Frame = 1
Query:    4 PNAGVL-PGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDSDYNKKDYAIPELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTI 804
            PN+ +  PG YAL+GA A LGG+ RMTISLTVI++E T D+  ++P+++ L+ +KW GD FN  +YD +++L  +P +   P   + ++   EVM  PA+ +  +  V  ++ LLR TS+NGFPV+  P          A+ +R           SG+++G++LR QL+ +L K++F    +  D V LD F D            LSE++    +DLRPF+N +P ++   A + R+F +FR++G RHLPIV+D ++ +G++TRK +
Sbjct:  515 PNSAIAQPGKYALIGAAAQLGGVVRMTISLTVIIMETTGDISFALPLIITLIAAKWTGDFFNEGIYDTYIQLSGVPLLPWEPPPLVHNIYASEVMSHPAITLKCVENVGHIVELLRLTSYNGFPVVDTP----------ASDQR-------EIRTSGRIRGLILRDQLIIILLKKIFNETAECWDDVNLDLFRDHYPRYPTVNDILLSEQEKTFSVDLRPFMNPSPYTVLHSASLPRMFRLFRALGLRHLPIVNDTNEVIGMVTRKDL 765          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: UPI00062574D9 (H(+)/Cl(-) exchange transporter 7 n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI00062574D9)

HSP 1 Score: 181 bits (459), Expect = 2.120e-48
Identity = 101/264 (38.26%), Postives = 158/264 (59.85%), Query Frame = 1
Query:   22 PGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDSDYNKKDYAIPE---LSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTI 804
            PG YAL+GA A LGG+ RMTISLTVILIE T  +   +P++++LL++KWVGD FN  +YDIH+++  +P +   P    +++   E+M  P V +  +  V  ++ LL+  S NGFPV+  P       D                   G+ +G++LRSQL+ LL+K+VF    +  D++        +Y +  Y   E   +++E+   KMDLRPF+N +P +L+  A + RVF++FR++G RHLPIV+D ++ +G++TRK I
Sbjct:  537 PGKYALLGAAAQLGGVVRMTISLTVILIEATGGISFGLPLIIVLLMAKWVGDFFNEGIYDIHIQMNGVPILPWEPPPLSNNIYASEIMSHPVVTLRTVENVGHIVELLKCVSFNGFPVVDPPTSDQEEIDCY-----------------GRFRGLILRSQLIVLLQKKVFNEYCEYWDEILNIRMFRDEYPR--YPTIEHVNITQEEKTYKMDLRPFMNPSPYTLQHSATLPRVFSLFRALGLRHLPIVNDTNEVIGMVTRKDI 781          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A7R9KYW3_9ACAR (Chloride channel protein n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KYW3_9ACAR)

HSP 1 Score: 171 bits (433), Expect = 1.350e-47
Identity = 99/273 (36.26%), Postives = 157/273 (57.51%), Query Frame = 1
Query:   16 VLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRA--------SRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDS--DYNKKDYAIPELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTI 804
            V PG +AL+GA A+LGGI RMTISLTVILIE T +L   +PIM+ L+ +KWVGD F   +YDIH++L  +PF+   P    S++   EVM SP        +V  +I  L S SHNGFPV+        VD    A   G     +++        +  G+ +G++LR QL+ +L++R+F   +Q         F D+   Y   +  + ++++ +    +D+RP +N +  +++  A ++R+F +FR+IG RHL + +D ++ +GI+TRK I
Sbjct:   65 VSPGKFALIGAAANLGGIVRMTISLTVILIEATGNLTFGLPIMITLITAKWVGDMFGEGIYDIHIQLSSIPFLGWEPPYGASNIYASEVMSSPVTTFKACEKVGVIIDALESQSHNGFPVVDTT-----VDSFCGAGANGRHFDMNQSYSIDYGHETTFGRYRGLVLRWQLIVMLKQRLFNEYEQDWHTYNWQTFRDAYPRYESIESVVADITDREREYTIDIRPVMNPSAYAVQHTASLTRIFRLFRAIGLRHLVVTNDRNEVIGIVTRKDI 332          
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Match: A0A6B2KYY7_9EUKA (Chloride channel protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYY7_9EUKA)

HSP 1 Score: 177 bits (449), Expect = 1.670e-47
Identity = 101/277 (36.46%), Postives = 153/277 (55.23%), Query Frame = 1
Query:    4 PNAGVLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLILLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAVCVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGPSRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDSDYNKKDYAIP-----ELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHLPIVDDDSKPVGIITRKTIMSSFD 819
            P+     G +A +GA + LGG +RMTISL VIL+E T+++   +P+M  L++SKW+GD FN  +YDIH+ L+ +P +E   S +M  +  G +M  P +C   I  V ++ ++L+ TSHNGFP+                             +SGK+QG++LRSQL+TLL+++ F    + L     +    SD+ K     P     EL   D    +DL P++N  P  ++  AP  RVF +FR++G RHLP++D  S  VGIITR+ I+   D
Sbjct:  421 PSWNTTAGTFAFVGAASFLGGCTRMTISLCVILMETTSNITFGLPLMFTLIISKWIGDFFNRGIYDIHIHLRKIPILEWETSTDMKGITAGHMMAKPVICFNPIERVGKIYSVLKHTSHNGFPI---------------------------TEKSGKIQGLILRSQLITLLQQKAFQKDCKILSPSDREMIHLSDFGKSYPRYPGIETVELQHSDKDLYIDLIPYMNLTPFIIQQNAPGDRVFRLFRTMGLRHLPVIDGKSHVVGIITRRDIIKHED 670          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80555.18865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DTF7_CAFRO2.360e-7549.64Chloride channel protein n=5 Tax=Sar TaxID=2698737... [more]
A0A812QLE0_9DINO1.520e-6946.95Chloride channel protein n=1 Tax=Symbiodinium sp. ... [more]
A0A0L0D9Y4_THETB1.350e-6247.44Chloride channel protein n=1 Tax=Thecamonas trahen... [more]
A0A6B2L9A7_9EUKA3.500e-5036.46Chloride channel protein (Fragment) n=1 Tax=Arcell... [more]
A0A6P5AP16_BRABE1.410e-4839.10Chloride channel protein n=5 Tax=Branchiostoma Tax... [more]
A0A0T6AWH6_9SCAR1.590e-4835.74Chloride channel protein (Fragment) n=1 Tax=Orycte... [more]
UPI001E2781AC1.900e-4837.31H(+)/Cl(-) exchange transporter 7 n=1 Tax=Harmonia... [more]
UPI00062574D92.120e-4838.26H(+)/Cl(-) exchange transporter 7 n=1 Tax=Athalia ... [more]
A0A7R9KYW3_9ACAR1.350e-4736.26Chloride channel protein n=1 Tax=Medioppia subpect... [more]
A0A6B2KYY7_9EUKA1.670e-4736.46Chloride channel protein (Fragment) n=1 Tax=Arcell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80555contigM-pyrifera_M_contig80555:1..834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score225.7
Seed ortholog evalue2.6e-56
Seed eggNOG ortholog529818.AMSG_05151T0
KEGG koko:K05016
KEGG TC2.A.49.3.3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Chloride Channel
EggNOG OGsCOG0038@1,KOG0474@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko04040
Exons1
Model size834
Cds size834
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816711.0803354-CDS-M-pyrifera_M_contig80555:0..8341622816711.0803354-CDS-M-pyrifera_M_contig80555:0..834Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80555 1..834 +
1692278134.3547196-CDS-M-pyrifera_M_contig80555:0..8341692278134.3547196-CDS-M-pyrifera_M_contig80555:0..834Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80555 1..834 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80555.18865.1prot_M-pyrifera_M_contig80555.18865.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80555 1..834 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80555.18865.1

>prot_M-pyrifera_M_contig80555.18865.1 ID=prot_M-pyrifera_M_contig80555.18865.1|Name=mRNA_M-pyrifera_M_contig80555.18865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=278bp
LPNAGVLPGVYALMGATASLGGISRMTISLTVILIEVTNDLQMSIPIMLI
LLVSKWVGDKFNISLYDIHVELKCLPFVEAAPSANMSHLCCGEVMQSPAV
CVPEIVEVRRVITLLRSTSHNGFPVISVPPELLPVDDVIAAQRRGTLVGP
SRASRSGKLQGMMLRSQLLTLLRKRVFGFGKQALDKVQLDDFLDSDYNKK
DYAIPELSEEDLAQKMDLRPFLNKAPISLRPEAPMSRVFTIFRSIGTRHL
PIVDDDSKPVGIITRKTIMSSFDADLY*
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mRNA from alignment at M-pyrifera_M_contig80555:1..834+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80555.18865.1 ID=mRNA_M-pyrifera_M_contig80555.18865.1|Name=mRNA_M-pyrifera_M_contig80555.18865.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig80555:1..834+ (Macrocystis pyrifera P11B4 male)
CTTCCCAATGCTGGGGTGCTTCCAGGAGTGTATGCGCTGATGGGAGCCAC TGCTAGCCTCGGGGGCATTTCGAGAATGACCATTTCGCTGACGGTGATTC TCATCGAAGTCACCAACGACCTGCAAATGTCCATTCCCATCATGCTCATC TTGCTCGTGTCAAAGTGGGTTGGTGACAAGTTCAACATTTCGCTCTACGA CATCCACGTGGAGCTCAAGTGTCTCCCTTTCGTCGAGGCTGCTCCTTCTG CAAACATGAGCCACCTCTGTTGTGGGGAGGTCATGCAAAGCCCTGCGGTT TGTGTCCCAGAAATCGTGGAGGTGCGTCGTGTCATCACCCTCCTCCGCTC CACCTCCCACAATGGCTTTCCCGTCATCTCGGTGCCTCCTGAGCTCCTTC CCGTTGATGACGTGATTGCTGCCCAGAGGAGGGGGACACTGGTGGGACCC AGTAGGGCTTCGAGGTCTGGAAAACTCCAGGGCATGATGCTTCGGTCCCA ACTCCTCACTCTCCTCCGCAAACGTGTGTTTGGGTTTGGGAAGCAAGCGC TGGACAAGGTGCAACTCGACGATTTCCTCGATTCCGACTACAACAAGAAG GACTATGCCATTCCCGAGCTCTCAGAGGAGGACCTCGCGCAGAAGATGGA CCTCCGCCCTTTCCTCAACAAAGCCCCCATCTCACTGCGGCCAGAAGCGC CCATGAGCAGGGTCTTCACCATCTTCAGATCCATCGGAACCAGACACCTC CCCATCGTTGACGACGACTCCAAACCAGTGGGAATCATCACCAGGAAAAC AATCATGTCATCCTTCGACGCCGATCTCTACTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80555:1..834+

>mRNA_M-pyrifera_M_contig80555.18865.1 ID=mRNA_M-pyrifera_M_contig80555.18865.1|Name=mRNA_M-pyrifera_M_contig80555.18865.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1668bp|location=Sequence derived from alignment at M-pyrifera_M_contig80555:1..834+ (Macrocystis pyrifera P11B4 male)
CTTCCCAATGCTGGGGTGCTTCCAGGAGTGTATGCGCTGATGGGAGCCAC
TGCTAGCCTCGGGGGCATTTCGAGAATGACCATTTCGCTGACGGTGATTC
TCATCGAAGTCACCAACGACCTGCAAATGTCCATTCCCATCATGCTCATC
TTGCTCGTGTCAAAGTGGGTTGGTGACAAGTTCAACATTTCGCTCTACGA
CATCCACGTGGAGCTCAAGTGTCTCCCTTTCGTCGAGGCTGCTCCTTCTG
CAAACATGAGCCACCTCTGTTGTGGGGAGGTCATGCAAAGCCCTGCGGTT
TGTGTCCCAGAAATCGTGGAGGTGCGTCGTGTCATCACCCTCCTCCGCTC
CACCTCCCACAATGGCTTTCCCGTCATCTCGGTGCCTCCTGAGCTCCTTC
CCGTTGATGACGTGATTGCTGCCCAGAGGAGGGGGACACTGGTGGGACCC
AGTAGGGCTTCGAGGTCTGGAAAACTCCAGGGCATGATGCTTCGGTCCCA
ACTCCTCACTCTCCTCCGCAAACGTGTGTTTGGGTTTGGGAAGCAAGCGC
TGGACAAGGTGCAACTCGACGATTTCCTCGATTCCGACTACAACAAGAAG
GACTATGCCATTCCCGAGCTCTCAGAGGAGGACCTCGCGCAGAAGATGGA
CCTCCGCCCTTTCCTCAACAAAGCCCCCATCTCACTGCGGCCAGAAGCGC
CCATGAGCAGGGTCTTCACCATCTTCAGATCCATCGGAACCAGACACCTC
CCCATCGTTGACGACGACTCCAAACCAGTGGGAATCATCACCAGGAAAAC
AATCATGTCATCCTTCGACGCCGATCTCTACTAGCTTCCCAATGCTGGGG
TGCTTCCAGGAGTGTATGCGCTGATGGGAGCCACTGCTAGCCTCGGGGGC
ATTTCGAGAATGACCATTTCGCTGACGGTGATTCTCATCGAAGTCACCAA
CGACCTGCAAATGTCCATTCCCATCATGCTCATCTTGCTCGTGTCAAAGT
GGGTTGGTGACAAGTTCAACATTTCGCTCTACGACATCCACGTGGAGCTC
AAGTGTCTCCCTTTCGTCGAGGCTGCTCCTTCTGCAAACATGAGCCACCT
CTGTTGTGGGGAGGTCATGCAAAGCCCTGCGGTTTGTGTCCCAGAAATCG
TGGAGGTGCGTCGTGTCATCACCCTCCTCCGCTCCACCTCCCACAATGGC
TTTCCCGTCATCTCGGTGCCTCCTGAGCTCCTTCCCGTTGATGACGTGAT
TGCTGCCCAGAGGAGGGGGACACTGGTGGGACCCAGTAGGGCTTCGAGGT
CTGGAAAACTCCAGGGCATGATGCTTCGGTCCCAACTCCTCACTCTCCTC
CGCAAACGTGTGTTTGGGTTTGGGAAGCAAGCGCTGGACAAGGTGCAACT
CGACGATTTCCTCGATTCCGACTACAACAAGAAGGACTATGCCATTCCCG
AGCTCTCAGAGGAGGACCTCGCGCAGAAGATGGACCTCCGCCCTTTCCTC
AACAAAGCCCCCATCTCACTGCGGCCAGAAGCGCCCATGAGCAGGGTCTT
CACCATCTTCAGATCCATCGGAACCAGACACCTCCCCATCGTTGACGACG
ACTCCAAACCAGTGGGAATCATCACCAGGAAAACAATCATGTCATCCTTC
GACGCCGATCTCTACTAG
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