mRNA_M-pyrifera_M_contig8016.18786.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE) HSP 1 Score: 303 bits (777), Expect = 6.150e-99 Identity = 154/228 (67.54%), Postives = 185/228 (81.14%), Query Frame = 1 Query: 1 GEEIYRDSMVSLSRPVLELITPNGCASSA--DPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALREN 678 G E+ +D L+ P+LELITP+GCASS+ + + L++++Q+AVAGGVSLVQLRDY S +SKA+LA R+ +A+ GRA FV+NGEPD ARA GADGVHLPER++ RLV LR G WPR+VGCSVHSVAAAVEAARLGADY+QVGTMF TQSHPGK PEGV +L DV+RQL+ EGL VLV+GVGGIDASNCG V AAGGDGVAAI CLC D EG+AR I+ +R + Sbjct: 89 GNEVAQDDATPLAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMDRLVGLRGQGEWPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMRNS 316
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.110e-52 Identity = 118/222 (53.15%), Postives = 146/222 (65.77%), Query Frame = 1 Query: 37 SRPVLELITPNGCASSADPA-FLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGR-AWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQL-KAEGLGD-----VLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGD--DTEGEAREIMAALR 672 S PVLELITP+G S+A P+ L + ++ AV+GGV LVQ+RD S ESK LA +L + VLNG DAA ACGA GVHLPER++ + R A VVGCSVHSV AAV AARLGADY+QVGTMF TQ+HPGK PEG LL ++ L +A G+ VL++GVGGI+ +NC +V AGGDGVAAI LC D D A+ ++AAL+ Sbjct: 40 SGPVLELITPDG--SAAQPSTHLAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTRAREALA---VVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRAVAQALLAALQ 256
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK) HSP 1 Score: 150 bits (380), Expect = 1.340e-39 Identity = 97/220 (44.09%), Postives = 122/220 (55.45%), Query Frame = 1 Query: 43 PVLELITPNGCA----SSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAID-GRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEG--------VSLLTDVQRQLKAEGLGDVL--VIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREI 657 P L LITP G S ++ + AV GGVSLVQLRD + E A + +R+ +D A F++NG+ D A AC ADGVHLPE VQ ++ + V+GCSVHS AA+ A + ADYI VGTMF T SHPGK PEG + +L Q + G + L V GVGGID NC +V GGDGVA IS LC D + +A E+ Sbjct: 4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFINSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLCFADRPKDKAEEV 223
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT) HSP 1 Score: 137 bits (345), Expect = 1.570e-35 Identity = 95/220 (43.18%), Postives = 122/220 (55.45%), Query Frame = 1 Query: 25 MVSLSRPV-----LELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAAL 669 M SL RP L L+T A P L ++ RAVAGGV++VQLR+ D LA L +AI GRA V+N D A A GADGVHLPE + + R G R+VG SVHSV AAV A GADYI VG ++PT+SHP G LL+ V+R ++ V V+ +GG+ A+ + AAG GVA IS + +D E AR + +AL Sbjct: 1 MTSLGRPFFPLPCLMLVTDRSLA----PLPLPQAAARAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGRALLVVNDRADVALAAGADGVHLPEDGLP-VAKARRLVGPARLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAVR------VPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGLRSAL 209
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT) HSP 1 Score: 132 bits (332), Expect = 9.920e-34 Identity = 83/192 (43.23%), Postives = 110/192 (57.29%), Query Frame = 1 Query: 100 LIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRE 675 L V RAVAGGV +VQLR+ D +LA L A +GR+ V+N D A A GADG+HLPER + + R G R+VG SVHS+A AV AA GADY+ VG+++ T+SHPG P G+ LL +V ++ V+ +GGI A +V AG GVA IS + + E AR + ALR+ Sbjct: 14 LTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGRSLLVVNDRADVALAAGADGLHLPERGLP-VAAARRLLGEGRLVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVSLP------VLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALRQ 198
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2D8PMH9_9CHLR (Thiamine-phosphate synthase n=5 Tax=root TaxID=1 RepID=A0A2D8PMH9_9CHLR) HSP 1 Score: 129 bits (323), Expect = 3.390e-32 Identity = 86/215 (40.00%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 31 SLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRE 675 S+ +P L L+T + DP L+ + AVAGGV +VQLR+ D + LAR + AI RA V+N A A GA GV L E + + R G ++G SVHSVA A EA GAD++ VGTM+ T+SHPG P G L+ + R L D+ +IG+GGI N G+V AAG GVA I+ + D E AR++ A+ + Sbjct: 4 SVLQPCLCLVTDR---TLXDPEDLVHRIAXAVAGGVDMVQLREKDLPGGTLLELARTVKEAIADRALLVVNERVXVALAAGASGVQLGEEALPAAI-ARDILGPDSLIGRSVHSVAGADEAVAQGADFLVVGTMYSTRSHPGAXPAGPELIRQISR------LCDIPLIGIGGIXEENLGEVLAAGAXGVAVITRILDAXDPEXAARKLKQAMSQ 208
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2E7PCV5_9CHLR (Thiamine-phosphate synthase n=6 Tax=Chloroflexi TaxID=200795 RepID=A0A2E7PCV5_9CHLR) HSP 1 Score: 124 bits (311), Expect = 1.260e-30 Identity = 80/213 (37.56%), Postives = 118/213 (55.40%), Query Frame = 1 Query: 31 SLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAAL 669 +L +P L L+T G A L+ V +AVAGGV LVQLRD + +LA +L AIDGRA ++N D A A GA GV + E + + +R+ G +G SVHS +AA+ A + GAD++ VGTM+ + SHPG+EP G L+ D+ + +IG+GG+ N G++ AG GVA I+ + D + A ++ +L Sbjct: 4 ALPKPCLCLVTDPGIAQK----DLVERVAQAVAGGVDLVQLRDKEMPGGQLLDLAAQLLKAIDGRAKLLVNERADVAHAAGAHGVQIGEEGLP-VSAVRNIVGDHSFIGRSVHSSSAALAAEKEGADFLVVGTMYASSSHPGEEPAGPGLMRDISGTCRLP------LIGIGGVTPENAGELVEAGASGVAVITNILAAPDPKAAAAKLKQSL 205
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A7X1PC47_9CHLR (Thiamine-phosphate synthase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X1PC47_9CHLR) HSP 1 Score: 124 bits (312), Expect = 1.290e-30 Identity = 82/212 (38.68%), Postives = 116/212 (54.72%), Query Frame = 1 Query: 43 PVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPER-IVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRE 675 PVL + ++D +R AVAGGVS+VQLRD+D ++ARRL + G+A V+N D A A +DG+ +PE+ + R+V RS G V+G SVH V AA AAR GA+Y+ GT++ + SHP EP G L++ + + + V+ +GGI N V AG DGVA IS + DD + A + AAL+E Sbjct: 13 PVLCFVVGKSDVKNSDIEATVRD---AVAGGVSMVQLRDHDVPAGELLDIARRLKAITRGKALLVINDRVDVAEAVESDGIQIPEQGLPTRIV--RSIMGRYVVIGRSVHGVEAAQNAAREGAEYVIAGTIYKSASHPDAEPAGPELISAITKD------SFLPVLAIGGITVDNIEDVVKAGADGVAVISAIAQADDPKAAAEALTAALKE 213
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A6L7Q5U4_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7Q5U4_9CHLR) HSP 1 Score: 125 bits (313), Expect = 1.350e-30 Identity = 94/250 (37.60%), Postives = 132/250 (52.80%), Query Frame = 1 Query: 31 SLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRENLLR*LLHAAAGHPLVRCGAAAAFAEYSQIPVKRD 780 +L P L L+T + P L + V AVAGGV LVQLRD ++ A L I GRA ++N D A A GADGV L E + + + R+ G V+G SVHSV A+ AA GAD++ VGTMF T+SHPG+EP G LL+ ++ + G+ + ++G+GGI A N +V A+G G A I+ + +D E AR + +A+ L AAG+P + + A A V D Sbjct: 4 TLPYPCLCLVTDR---TVCPPDELPQRVAAAVAGGVDLVQLRDKEAPGGVLLEQAWDLREIIQGRALLLVNERADVALAAGADGVQLGEMALP-VDEARTILGPGAVIGRSVHSVPGALHAAVNGADFLLVGTMFATRSHPGEEPSGPGLLS----RIASAGVA-IPMLGIGGITAENVAEVMASGASGAAVITGILASEDPETAARRLKSAM--------LDTAAGNPSIEYESQPAAAHRLAAQVTGD 236
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2N0KGQ3_9CHLR (Thiamine-phosphate synthase n=1 Tax=SAR202 cluster bacterium Casp-Chloro-G3 TaxID=1926605 RepID=A0A2N0KGQ3_9CHLR) HSP 1 Score: 124 bits (310), Expect = 1.580e-30 Identity = 75/194 (38.66%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 88 DPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAAL 669 D A L+ + AV+GGV LVQLR+ D LA+R+ AI A ++N D A A A+GV L E + ++ R G ++G SVHS+ A++AA GAD++ VGTMF ++SHPG+EP G +L+ + + + G+GGIDASN G V AG GVA I+ + + AR+I A+ Sbjct: 11 DEATLVARIADAVSGGVDLVQLREKDLPGGPLLELAQRIREAISDSAMLIINERVDVAAAIAANGVQLGEEALPT-IEARKILGHDTLIGRSVHSLEGALQAAEQGADFLLVGTMFASRSHPGEEPAGPALVRQITVRCSLP------LFGIGGIDASNAGHVMDAGASGVAVITSILASPSPKEAARQIKRAI 197 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8016.18786.1 >prot_M-pyrifera_M_contig8016.18786.1 ID=prot_M-pyrifera_M_contig8016.18786.1|Name=mRNA_M-pyrifera_M_contig8016.18786.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp MVSLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYback to top mRNA from alignment at M-pyrifera_M_contig8016:2279..5282+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8016.18786.1 ID=mRNA_M-pyrifera_M_contig8016.18786.1|Name=mRNA_M-pyrifera_M_contig8016.18786.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3004bp|location=Sequence derived from alignment at M-pyrifera_M_contig8016:2279..5282+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8016:2279..5282+ >mRNA_M-pyrifera_M_contig8016.18786.1 ID=mRNA_M-pyrifera_M_contig8016.18786.1|Name=mRNA_M-pyrifera_M_contig8016.18786.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig8016:2279..5282+ (Macrocystis pyrifera P11B4 male)back to top |