mRNA_M-pyrifera_M_contig79984.18758.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: UPI001403F43A (ATP-dependent DNA helicase PIF1 isoform X2 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403F43A) HSP 1 Score: 223 bits (569), Expect = 3.250e-64 Identity = 136/300 (45.33%), Postives = 172/300 (57.33%), Query Frame = 1 Query: 16 TAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRC-DAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAK-RTPVVRMANG 909 T TASTG+AACH+GG TLH+FAG+ + P E + +ARR VL+RWR+ TL++DEV MV A F+ ++A+AR RG D PFGGIQLVL GDF QLPPVS+ ++ F F++ SW V L +EL QV RQKD +R L +R GRC D T L+A + A K G+L TR+CTHR DV IN +L + F+A+D PS A LD C L L++GAQVM +NLD RGLVNG+RGVV F K P+VR A G Sbjct: 281 TIATASTGVAACHIGGMTLHAFAGMGS-GMGPLEQCVTMARRPGVLQRWRSCHTLIIDEVSMVSADFFDKMEAVARTVRGRDEPFGGIQLVLSGDFLQLPPVSRDRTVKR----------------------TFSFQAKSWRRCVHLAMELTQVHRQKDQAFIRVLQMVRTGRCTDEVTRCLVATKDNAIE-KDGILATRLCTHRDDVQLINTCQLAKLPGETHMFDALDSDPSQ-----AKALDAMCPVEASLQLRRGAQVMLTKNLDVQRGLVNGARGVVTDFSTEKFGLPLVRFACG 551
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: UPI001402C2A9 (ATP-dependent DNA helicase PIF1 isoform X1 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402C2A9) HSP 1 Score: 223 bits (569), Expect = 3.420e-64 Identity = 136/300 (45.33%), Postives = 172/300 (57.33%), Query Frame = 1 Query: 16 TAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRC-DAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAK-RTPVVRMANG 909 T TASTG+AACH+GG TLH+FAG+ + P E + +ARR VL+RWR+ TL++DEV MV A F+ ++A+AR RG D PFGGIQLVL GDF QLPPVS+ ++ F F++ SW V L +EL QV RQKD +R L +R GRC D T L+A + A K G+L TR+CTHR DV IN +L + F+A+D PS A LD C L L++GAQVM +NLD RGLVNG+RGVV F K P+VR A G Sbjct: 281 TIATASTGVAACHIGGMTLHAFAGMGS-GMGPLEQCVTMARRPGVLQRWRSCHTLIIDEVSMVSADFFDKMEAVARTVRGRDEPFGGIQLVLSGDFLQLPPVSRDRTVKR----------------------TFSFQAKSWRRCVHLAMELTQVHRQKDQAFIRVLQMVRTGRCTDEVTRCLVATKDNAIE-KDGILATRLCTHRDDVQLINTCQLAKLPGETHMFDALDSDPSQ-----AKALDAMCPVEASLQLRRGAQVMLTKNLDVQRGLVNGARGVVTDFSTEKFGLPLVRFACG 551
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: A0A5N5SV06_9CRUS (ATP-dependent DNA helicase n=3 Tax=Armadillidium TaxID=13346 RepID=A0A5N5SV06_9CRUS) HSP 1 Score: 215 bits (548), Expect = 9.260e-64 Identity = 128/298 (42.95%), Postives = 170/298 (57.05%), Query Frame = 1 Query: 16 TAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRCDAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAKRTPVVRMANG 909 T VTASTGIAACH+GG TLHSFAG+ N+ P + +ARR V+ W+ L++DE+ MVD FE ++A+AR G+D+PFGGIQL+LCGDF QLPPVS GA + FCF++S+W + +EL QV RQ D + L IR GRC+ +LA + G+ TR+CTH+ DV+ IN +L+ + + F +VD P LS D LD S L LK GAQVM ++NLD +GLVNG+RGVV GF G P+V+ +G Sbjct: 25 TFVTASTGIAACHIGGTTLHSFAGIGNGNL-PLNECINMARRKSVVHHWKTCKHLIIDEISMVDGEFFEKMEAVARNILGNDKPFGGIQLILCGDFLQLPPVSTKGAKKS-----------------------FCFQTSAWDKCINTNIELLQVKRQNDPLFIEILQNIRIGRCNPDHEKVLAETVNNNVEREGIKATRLCTHKDDVEHINSVQLKKLPGDSRIFSSVDSDPYLS-----DTLDNSTPVLGKLHLKVGAQVMLMKNLDVSQGLVNGARGVVTGFSGTG-LPIVKFTSG 292
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: UPI0014033E3C (ATP-dependent DNA helicase PIF1 isoform X3 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014033E3C) HSP 1 Score: 220 bits (561), Expect = 2.290e-63 Identity = 130/285 (45.61%), Postives = 165/285 (57.89%), Query Frame = 1 Query: 16 TAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRC-DAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGF 867 T TASTG+AACH+GG TLH+FAG+ + P E + +ARR VL+RWR+ TL++DEV MV A F+ ++A+AR RG D PFGGIQLVL GDF QLPPVS+ ++ F F++ SW V L +EL QV RQKD +R L +R GRC D T L+A + A K G+L TR+CTHR DV IN +L + F+A+D PS A LD C L L++GAQVM +NLD RGLVNG+RGVV F Sbjct: 281 TIATASTGVAACHIGGMTLHAFAGMGS-GMGPLEQCVTMARRPGVLQRWRSCHTLIIDEVSMVSADFFDKMEAVARTVRGRDEPFGGIQLVLSGDFLQLPPVSRDRTVKR----------------------TFSFQAKSWRRCVHLAMELTQVHRQKDQAFIRVLQMVRTGRCTDEVTRCLVATKDNAIE-KDGILATRLCTHRDDVQLINTCQLAKLPGETHMFDALDSDPSQ-----AKALDAMCPVEASLQLRRGAQVMLTKNLDVQRGLVNGARGVVTDF 536
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: UPI0006B0D2DA (ATP-dependent DNA helicase PIF1-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0D2DA) HSP 1 Score: 219 bits (559), Expect = 3.650e-63 Identity = 128/301 (42.52%), Postives = 178/301 (59.14%), Query Frame = 1 Query: 10 SRTAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRCDAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVG-AKRTPVVRMANG 909 + T TASTGIAAC +GG TLHSFAG+ + S E + A+R EV ++WR LVVDE+ MVD F+ ++ +ARV R +D+PFGGIQL+LCGDF QLPPVSK + E+R LFCF++S+W + + +EL QV RQKD R + L+ IR GRC +LA + G+ TR+CTH+ DVD IN ++L+ + + F+A D PSLS ++D+ C + LK+ Q+M +NLD RGLVNG+RGV+VGF + PV++ +G Sbjct: 234 NHTVATASTGIAACQIGGITLHSFAGIGSGSYSL-EQCIKQAQRKEVAQQWRRCQHLVVDEISMVDGTYFQKLEKVARVVRNNDKPFGGIQLILCGDFLQLPPVSK-------SNENR----------------LFCFQTSAWKKCIQINMELTQVKRQKDLRFINILNSIRLGRCPDTIAKILASSSDHQIEQNGIKATRLCTHKEDVDYINRSQLQDLPGNSKVFKATDSDPSLS-----QLMDKHCPVSTSIELKQDTQIMLTKNLDVQRGLVNGARGVIVGFENNVEGLPVIKFVSG 505
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: UPI0003F0F14C (ATP-dependent DNA helicase PIF1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0F14C) HSP 1 Score: 213 bits (542), Expect = 7.270e-63 Identity = 124/312 (39.74%), Postives = 172/312 (55.13%), Query Frame = 1 Query: 16 TAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRCDAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAKR-TPVVRMANGRQVAFEPVQVRVK 948 T TASTG+AACH+ G TLH FAG+ S E + +A R ++W+ L+VDEV M+DA F ++ +ARV RG D PFGGIQL+LCGDF QLPPV+K G R LFCF+SS+W + + EL +V RQ D + L IR GRC L ++ AG+L TR+CTH+ DV+ IN+ +L + F A+D P+L +++ C + +TLK+G QVM +NL RGLVNG+RGVV+GF A++ P++R NG + P + +K Sbjct: 1 TFATASTGVAACHINGITLHQFAGIGSGTQSL-ETCIELASRPARTKQWKRCKHLIVDEVSMLDADFFTKIEHVARVIRGKDLPFGGIQLILCGDFLQLPPVTKSGQKR-----------------------LFCFQSSAWHNCIQMTFELTEVRRQTDIEFINILQHIRIGRCPKEMCEKLVSTNSNKIETAGILATRLCTHKEDVEQINVVQLEKLSGETRIFNALDSDPAL-----VKLINNQCSVKAKITLKRGTQVMLTKNLAVQRGLVNGARGVVIGFNNAEKGLPIIRFLNGVEQTITPERWTIK 283
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: A0A2P6VG44_9CHLO (ATP-dependent DNA helicase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VG44_9CHLO) HSP 1 Score: 218 bits (556), Expect = 1.910e-62 Identity = 136/305 (44.59%), Postives = 181/305 (59.34%), Query Frame = 1 Query: 1 PRDSRTAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRCDAATTALLAPRHAAPRPKA-GVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAKRTPVVRMANGR 912 PR++ T VT +TG+AACHLGG T++S+AG+ R S E+ + +A R E L+RWRA L+VDEV M+D F++++A+AR RGS PFGGIQL+L GDF QLPPV+K R+GA + + FCFE+ SWA +P L +VFRQ D+ V L +IR G C + L A P P G+LPT++ THR DVD IN +L+ + F A DVG +VL +C RR L LK GAQV ++N+ +GLVNG+RGVV F ++ PVVR ANGR Sbjct: 264 PRNT-TFVTGTTGLAACHLGGTTINSYAGIGRGEGSL-ESLVRMAGRGESLQRWRATTHLIVDEVSMMDGRLFDTLEAVARKVRGSAAPFGGIQLILSGDFHQLPPVAK---GREGAAQRK-----------------FCFEAESWARCIPESCFLSKVFRQSDNEFVDLLGKIRSGSCPQDKVSQLLKTCARPLPTDDGILPTKLFTHREDVDLINAQQLKALPSEPHKFVAQDVGSG-------EVLAAACPARRTLELKVGAQVTLIKNISQRQGLVNGARGVVEKFNDSQGLPVVRFANGR 539
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: A0A2P6TVH0_CHLSO (ATP-dependent DNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVH0_CHLSO) HSP 1 Score: 218 bits (555), Expect = 2.760e-62 Identity = 138/305 (45.25%), Postives = 179/305 (58.69%), Query Frame = 1 Query: 1 PRDSRTAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRCDAATTALLAPRHAAPRP-KAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAKRTPVVRMANGR 912 PRD+ T VT +TG+AACHLGG T++SFAG+ R S EA + A R E L+RWRA L++DEV M+D F++++ +AR RGS+ PFGGIQL+L GDF QLPPV+K G+ FCFE+ SWA V L +VFRQ D+ V L +IR G C + L P P + G+LPT++ THR DVDA+N +LR + A F A D G SP DVL +C RR L LK GAQVM +RN+ +GLVNG+RGVV F ++ PVVR A+G+ Sbjct: 266 PRDT-TFVTGTTGLAACHLGGTTINSFAGIGRAEGSL-EALMRSAARGESLQRWRATTHLIIDEVSMMDGRLFDALEHVARKVRGSNAPFGGIQLILSGDFHQLPPVAK--------------------GKDAASQRKFCFEAESWARCVHECCFLSKVFRQADNEFVEMLARIRSGDCPRDKLSHLLRTCQRPLPVEDGILPTKLYTHREDVDALNAQQLRALPGEARRFVAQDAG---SP----DVLAAACPARRTLDLKVGAQVMLIRNISHRQGLVNGARGVVERFSESQNLPVVRFASGK 541
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: F6WYU9_CIOIN (ATP-dependent DNA helicase PIF1 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6WYU9_CIOIN) HSP 1 Score: 216 bits (551), Expect = 4.460e-62 Identity = 121/300 (40.33%), Postives = 172/300 (57.33%), Query Frame = 1 Query: 13 RTAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRCDAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAKRT-PVVRMANG 909 +TAVTASTG+AACH+GG TLHSFAG+ + S R V+++W+A L++DE+ M+ F+ ++A+AR RGS PFGGIQL+LCGDFFQLPPVSK K CF+S SW V + ELK V+RQ D++ ++ L IR GRC A +L G+L T++CTH+ +V N +L + + +EA D S A D++D+ +++TLKKGAQVM +NL+ G+G+VNG+RG+V GF +++ P+VR NG Sbjct: 237 QTAVTASTGVAACHIGGVTLHSFAGIGSGSASIENCIQLAKSRPAVVKQWKACRHLIIDEISMISGDFFDKIEAVARAVRGSMDPFGGIQLILCGDFFQLPPVSKGKETVK-----------------------LCFQSKSWQPCVDVCWELKHVYRQTDTKFIQMLQDIRIGRCTAKIEEVLKATKLNKTENNGILATQLCTHKENVQLCNKNQLEKLPSDPIVYEAQD-----STTAFTDIIDKMLPDTKIITLKKGAQVMLNKNLNVGKGMVNGARGIVTGFTKSEQPLPIVRFLNG 508
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Match: UPI002019B95A (ATP-dependent DNA helicase PIF1 n=2 Tax=Heteromyidae TaxID=10015 RepID=UPI002019B95A) HSP 1 Score: 216 bits (551), Expect = 1.120e-61 Identity = 130/299 (43.48%), Postives = 172/299 (57.53%), Query Frame = 1 Query: 16 TAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVLRRWRAADTLVVDEVYMVDAATFESVDAIARVARGSDRPFGGIQLVLCGDFFQLPPVSKHGAARKGAKEHRGAKWGAEKGEKRGGSGLFCFESSSWAAAVPLVVELKQVFRQKDSRLVRALHQIRRGRCDAATTALLAPRHAAPRPKAGVLPTRICTHRSDVDAINLAELRGIREPAVDFEAVDVGPSLSPGAVADVLDRSCCFRRLLTLKKGAQVMCLRNLDPGRGLVNGSRGVVVGFVGAKR-TPVVRMANG 909 T TASTG+AACH+GG TLH+FAG+ +P +A+A+R V + W A LV+DE+ MV+A F+ ++A+AR R ++PFGGIQL++CGDF QLPPV+K G+++ + FCF++ SW VPL +EL +V+RQ D V L +R GRC T L A + G++ TR+CTH+ DV N L+ +R FEAVD P L A LD C RLL LK+GAQVM ++NL RGLVNG+RGVVVGF R P VR G Sbjct: 269 TVATASTGVAACHIGGTTLHAFAGIGS-GQAPLAQCVALAQRPGVRQGWLACQRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTK----------------GSQRPQ-------FCFQAKSWRRCVPLTLELTEVWRQADKTFVSLLQAVRLGRCSDEVTRQLRATAAHKVGRDGIVATRLCTHQDDVALTNERRLQELRGEVHSFEAVDSDPEL-----ARTLDAQCPVSRLLQLKQGAQVMLVKNLAVSRGLVNGARGVVVGFEAEGRGLPQVRFLCG 538 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79984.18758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79984.18758.1 >prot_M-pyrifera_M_contig79984.18758.1 ID=prot_M-pyrifera_M_contig79984.18758.1|Name=mRNA_M-pyrifera_M_contig79984.18758.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=316bp PRDSRTAVTASTGIAACHLGGQTLHSFAGLSRVNVSPREAALAVARRSEVback to top mRNA from alignment at M-pyrifera_M_contig79984:8..955- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79984.18758.1 ID=mRNA_M-pyrifera_M_contig79984.18758.1|Name=mRNA_M-pyrifera_M_contig79984.18758.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig79984:8..955- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79984:8..955- >mRNA_M-pyrifera_M_contig79984.18758.1 ID=mRNA_M-pyrifera_M_contig79984.18758.1|Name=mRNA_M-pyrifera_M_contig79984.18758.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1896bp|location=Sequence derived from alignment at M-pyrifera_M_contig79984:8..955- (Macrocystis pyrifera P11B4 male)back to top |