mRNA_M-pyrifera_M_contig79932.18750.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79932.18750.1
Unique NamemRNA_M-pyrifera_M_contig79932.18750.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: A0A7S2WDB8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WDB8_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.440e-60
Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 1 
Query:    4 DTAVIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVREGREAERAFEHVTAEVGAYEAEE 498
            +TA++HPLV+L+VVDHY RVAK   +R VG+LLGET   +VD++NSFAVPF+ED KDP IWYLDH+++E M+ MF KV  KE+IVGFY+T  +IRP DL++DVL R YC  PVLV++D+RP   G    +P  AY SVE V + +EA R F+H+ + V AYEAEE
Sbjct:    8 ETAIVHPLVLLSVVDHYNRVAKDTKKRVVGVLLGETYKGRVDVSNSFAVPFEEDAKDPSIWYLDHSFLENMFNMFKKVNAKERIVGFYTTGPKIRPNDLELDVLFRRYCSNPVLVIIDIRPEVQG----VPTQAYYSVEEVDDSKEATRTFKHIDSLVEAYEAEE 168
[Close]
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: H3G7T3_PHYRM (MPN domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3G7T3_PHYRM)

HSP 1 Score: 196 bits (499), Expect = 4.570e-60
Identity = 100/166 (60.24%), Postives = 123/166 (74.10%), Query Frame = 1 
Query:    4 DTAVIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVRE-GREAERAFEHVTAEVGAYEAEE 498
            +  V HPLV+L++VDHY RVA+  S+R VG+LLG T   K DITNSFAVPFDED ++P IWYLDH ++E MY+MF K+  KE+IVGFYS+  +IR ADLDID L R YCP PVLV+ DVRP+     E LP  AY SVE V E G+  +R F+H+T+ VGAYEAEE
Sbjct:    1 EEVVTHPLVLLSIVDHYNRVARDTSKRVVGVLLGSTFHGKCDITNSFAVPFDEDLRNPGIWYLDHDFLENMYQMFKKINAKERIVGFYSSGPKIRKADLDIDDLFRRYCPNPVLVICDVRPS----VEGLPTTAYGSVEEVEEDGKAIKRVFKHITSTVGAYEAEE 162
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BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: A0A2D4CCS2_PYTIN (26S proteasome non-ATPase regulatory subunit 7 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CCS2_PYTIN)

HSP 1 Score: 193 bits (491), Expect = 2.810e-58
Identity = 98/166 (59.04%), Postives = 120/166 (72.29%), Query Frame = 1 
Query:    4 DTAVIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVRE-GREAERAFEHVTAEVGAYEAEE 498
            +  V HPLV+L++VDHY RVAK  S+R VG+LLG T   K DITNSFAVPFDED ++P IWYLDH Y+E M+ MF K+  KE+IVGFYST  +IR ADL+ID L R YCP PVLV+ DVRP      E LP  AY S+E V E G+  +R F+H+ + +GAYEAEE
Sbjct:   12 EEVVTHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSTFQGKCDITNSFAVPFDEDLRNPGIWYLDHDYLESMFNMFKKINAKERIVGFYSTGPKIRKADLEIDELFRRYCPNPVLVICDVRPN----VEGLPTTAYGSIEEVEEDGKAIKRTFKHIKSTIGAYEAEE 173
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BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: A0A6S9JFQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JFQ0_HETAK)

HSP 1 Score: 192 bits (487), Expect = 1.690e-57
Identity = 97/163 (59.51%), Postives = 118/163 (72.39%), Query Frame = 1 
Query:   13 VIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVR-EGREAERAFEHVTAEVGAYEAEE 498
            V+HPLV+L+ VDHY RVAK   +R VG+LLG T    VD+TNSFAVPF+ED K+P IWYLDH Y+E M+ MF KVA KE+IVGFYST  +I+  DL+ID L R +CP PV V++DVRP      E LP  AY SVE V  EG+E +RAF H+ + VGA EAEE
Sbjct:   27 VVHPLVLLSAVDHYNRVAKDTKKRVVGVLLGSTFKGTVDVTNSFAVPFEEDLKNPTIWYLDHNYLENMFNMFRKVAAKERIVGFYSTGPKIKENDLEIDELFRRFCPSPVYVIIDVRPE----LEGLPTTAYHSVEEVEAEGKEVQRAFRHLPSAVGALEAEE 185
[Close]
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: K3WRI7_GLOUD (MPN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRI7_GLOUD)

HSP 1 Score: 190 bits (483), Expect = 5.440e-57
Identity = 96/166 (57.83%), Postives = 120/166 (72.29%), Query Frame = 1 
Query:    4 DTAVIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVRE-GREAERAFEHVTAEVGAYEAEE 498
            +  V HPLV+L++VDHY RVA+  S+R VG+LLG T   K DITNSFAVPFDED ++P IWYLDH ++E MY+MF K+  KE+IVGFYST  +IR  DL+ID L R YCP PVLV+ DVRP      E LP  AY S+E V E G+  +R F+H+ + +GAYEAEE
Sbjct:   19 EEVVTHPLVLLSIVDHYNRVARDTSKRVVGVLLGSTFQGKCDITNSFAVPFDEDLRNPGIWYLDHDFLENMYQMFKKINAKERIVGFYSTGPKIRKPDLEIDELFRRYCPNPVLVICDVRPN----VEGLPTTAYGSIEEVEEDGKAIKRIFKHIKSTIGAYEAEE 180
[Close]
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: L8GEU6_ACACA (26S proteasome nonATPase regulatory subunit 7, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEU6_ACACA)

HSP 1 Score: 186 bits (473), Expect = 1.480e-55
Identity = 95/167 (56.89%), Postives = 125/167 (74.85%), Query Frame = 1 
Query:    1 VDTAVIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVV-REGREAERAFEHVTAEVGAYEAEE 498
            ++T V+HPLV+L+VVDHY RVAK   +R VG+LLGET    VDITNS+AVPF+ED ++PKIW++DH Y E M+ MF KV  KE++VG+YST  +IRPADLDI  L R Y P PVLV+++V+P   G    LP  AY +VE V ++G E++ AF+H+ +EVGA EAEE
Sbjct:   10 INTVVVHPLVLLSVVDHYNRVAKDTKKRVVGVLLGETNKGVVDITNSYAVPFEEDPRNPKIWFVDHNYHENMFAMFKKVHAKERVVGWYSTGPKIRPADLDIHELFRRYTPNPVLVIINVKPTEIG----LPTKAYLTVEEVSKDGTESKMAFQHIPSEVGAVEAEE 172
[Close]
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: A0A6G0X714_9STRA (MPN domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X714_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.550e-55
Identity = 94/163 (57.67%), Postives = 115/163 (70.55%), Query Frame = 1 
Query:   13 VIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVRE-GREAERAFEHVTAEVGAYEAEE 498
            V HPLV+L++VDHY RVAK  S+R VG+LLG     K D+TNSFAVPFDED + P IWYLDH Y+E MY MF K++  E+IVGFYST  +IR ADL +D L R YCP PVLV+ DVRP      E LP  AY S+E V E G+  +R F+H+ + + AYEAEE
Sbjct:   21 VTHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSVSKGKCDVTNSFAVPFDEDLRHPSIWYLDHDYLENMYGMFKKISANERIVGFYSTGPKIRTADLSLDELFRRYCPNPVLVICDVRPN----VEGLPTTAYGSIEEVEEDGKAIKRTFKHIKSTIAAYEAEE 179
[Close]
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: A0A2R5GQW0_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQW0_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.240e-55
Identity = 92/165 (55.76%), Postives = 119/165 (72.12%), Query Frame = 1 
Query:    4 DTAVIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVREGREAERAFEHVTAEVGAYEAEE 498
            + AV+HPLV+L+VVDHY RVA+   +R VG+LLG T   +VDI+NSFAVPF+ED KDP IWYLDH+++E M+ MF KV   E+IVGFYST  +IR  DL +DVL R YC  PVLV+VD+RP   G    +P  AY S+E V + +E  R F+H+ + + AYEAEE
Sbjct:    8 ECAVVHPLVLLSVVDHYNRVARDTKKRVVGVLLGSTHKGRVDISNSFAVPFEEDMKDPTIWYLDHSFLENMFAMFRKVNASERIVGFYSTGPKIRQNDLQLDVLFRRYCSNPVLVIVDIRPEVQG----VPTQAYYSMEEVNDKKETVRTFKHIDSLIEAYEAEE 168
[Close]
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: A0A7S3PRF2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRF2_9STRA)

HSP 1 Score: 184 bits (467), Expect = 6.130e-55
Identity = 94/163 (57.67%), Postives = 119/163 (73.01%), Query Frame = 1 
Query:   13 VIHPLVMLNVVDHYTRVAKGA-SRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVREGREAERAFEHVTAEVGAYEAEE 498
            V+HPLV+L+VVDHY R+AK    +R VG LLGET   +VD++NSFAVPF+ED KDP IWYLDH ++E M+ MF KV+ KEKIVGFYST  +I+  DLD+DVL R Y   P+LV++DVR      S+ +P  AY SVE+V E +   R F +V +EVGAYEAEE
Sbjct:    8 VVHPLVLLSVVDHYNRIAKDIPGKRVVGCLLGETYQGRVDVSNSFAVPFEEDPKDPSIWYLDHNFLENMFGMFRKVSAKEKIVGFYSTGPKIKSNDLDVDVLFRRYVADPILVIIDVRQE----SKGIPTQAYYSVELVDEAKNTARTFANVPSEVGAYEAEE 166
[Close]
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Match: A0A662X4Z2_9STRA (MPN domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Z2_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.920e-55
Identity = 96/166 (57.83%), Postives = 118/166 (71.08%), Query Frame = 1 
Query:    4 DTAVIHPLVMLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPKIWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYCPCPVLVLVDVRPAGGGASESLPVAAYRSVEVVRE-GREAERAFEHVTAEVGAYEAEE 498
            +  V HPLV+L++VDHY RVA+  S+R VG+LLG T   K DITNSFAVPFDED ++P IWYLDH ++E MY+MF K+  KE+IVGFYST  +IR ADLDID L R YC  PVLV+ DV        E LP  AY S+E V E G+  +R F+H+ + VGAYEAEE
Sbjct:   47 EEVVTHPLVLLSIVDHYNRVARDTSKRVVGVLLGSTFHGKCDITNSFAVPFDEDLRNPGIWYLDHDFLENMYQMFKKINAKERIVGFYSTGPKIRKADLDIDGLFRRYCAHPVLVICDVH----SDVEVLPTTAYGSIEEVEEDGKAIKRIFKHIKSTVGAYEAEE 208
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79932.18750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2WDB8_9STRA1.440e-6058.18Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
H3G7T3_PHYRM4.570e-6060.24MPN domain-containing protein n=17 Tax=Peronospora... [more]
A0A2D4CCS2_PYTIN2.810e-5859.0426S proteasome non-ATPase regulatory subunit 7 n=2... [more]
A0A6S9JFQ0_HETAK1.690e-5759.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WRI7_GLOUD5.440e-5757.83MPN domain-containing protein n=1 Tax=Globisporang... [more]
L8GEU6_ACACA1.480e-5556.8926S proteasome nonATPase regulatory subunit 7, put... [more]
A0A6G0X714_9STRA1.550e-5557.67MPN domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A2R5GQW0_9STRA3.240e-5555.76Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3PRF2_9STRA6.130e-5557.67Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A662X4Z2_9STRA8.920e-5557.83MPN domain-containing protein n=2 Tax=Nothophytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79932contigM-pyrifera_M_contig79932:250..957 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.7
Seed ortholog evalue2e-45
Seed eggNOG ortholog164328.Phyra53287
Preferred namePSMD7
KEGG koko:K03038,ko:K08825,ko:K20306
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005819,GO:0005829,GO:0005838,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0007088,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008541,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009791,GO:0009793,GO:0009896,GO:0009965,GO:0009987,GO:0010016,GO:0010154,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016192,GO:0016579,GO:0019538,GO:0019941,GO:0022414,GO:0022624,GO:0030071,GO:0030141,GO:0030163,GO:0030425,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0036477,GO:0042119,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044463,GO:0044464,GO:0045055,GO:0045087,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0046983,GO:0048316,GO:0048366,GO:0048367,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051233,GO:0051234,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0061458,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0072686,GO:0090068,GO:0097447,GO:0097458,GO:0097708,GO:0099402,GO:0099503,GO:0101002,GO:0120025,GO:0120038,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905392,GO:1905818,GO:1905820,GO:1990023,GO:2001252
EggNOG free text desc.Maintenance of mitochondrial structure and function
EggNOG OGs3QD9A@4776,COG1310@1,KOG1556@2759
EC2.7.12.1
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03051,ko04131
Exons3
Model size498
Cds size468
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79932.18750.1prot_M-pyrifera_M_contig79932.18750.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79932 280..957 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816703.1274896-UTR-M-pyrifera_M_contig79932:249..2791622816703.1274896-UTR-M-pyrifera_M_contig79932:249..279Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79932 250..279 +
1692278129.1583762-UTR-M-pyrifera_M_contig79932:249..2791692278129.1583762-UTR-M-pyrifera_M_contig79932:249..279Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79932 250..279 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816703.1380892-CDS-M-pyrifera_M_contig79932:279..3971622816703.1380892-CDS-M-pyrifera_M_contig79932:279..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79932 280..397 +
1692278129.1758418-CDS-M-pyrifera_M_contig79932:279..3971692278129.1758418-CDS-M-pyrifera_M_contig79932:279..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79932 280..397 +
1622816703.148355-CDS-M-pyrifera_M_contig79932:509..6021622816703.148355-CDS-M-pyrifera_M_contig79932:509..602Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79932 510..602 +
1692278129.18622-CDS-M-pyrifera_M_contig79932:509..6021692278129.18622-CDS-M-pyrifera_M_contig79932:509..602Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79932 510..602 +
1622816703.15913-CDS-M-pyrifera_M_contig79932:700..9571622816703.15913-CDS-M-pyrifera_M_contig79932:700..957Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79932 701..957 +
1692278129.1968088-CDS-M-pyrifera_M_contig79932:700..9571692278129.1968088-CDS-M-pyrifera_M_contig79932:700..957Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79932 701..957 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79932.18750.1

>prot_M-pyrifera_M_contig79932.18750.1 ID=prot_M-pyrifera_M_contig79932.18750.1|Name=mRNA_M-pyrifera_M_contig79932.18750.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
MLNVVDHYTRVAKGASRRAVGILLGETVGSKVDITNSFAVPFDEDRKDPK
IWYLDHTYMEKMYKMFHKVAHKEKIVGFYSTASEIRPADLDIDVLIRNYC
PCPVLVLVDVRPAGGGASESLPVAAYRSVEVVREGREAERAFEHVTAEVG
AYEAEE
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mRNA from alignment at M-pyrifera_M_contig79932:250..957+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79932.18750.1 ID=mRNA_M-pyrifera_M_contig79932.18750.1|Name=mRNA_M-pyrifera_M_contig79932.18750.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig79932:250..957+ (Macrocystis pyrifera P11B4 male)
GTGGACACAGCAGTGATTCACCCCTTGGTGATGCTGAATGTGGTGGATCA
CTACACGCGTGTGGCAAAAGGAGCTTCTCGACGAGCTGTCGGTATTTTGC
TGGGTGAAACAGTGGGTTCGAAGGTGGATATTACCAACAGTTTTGCTGGT
AAGTGGGGTTTGGAAGGGGTGGGGTGGTGGTAGGGGTAGAATGGGGCCGA
GGGGAAGGGAACAGGAGGGAGTTCGATGGAGGAATATGGAGTGGCTCCGT
TTTCGTGCAGTTCCATTCGACGAGGACAGGAAAGATCCCAAGATTTGGTA
TCTGGATCATACGTATATGGAAAAGATGTACAAGATGTTCCACAAAGTAG
CCCGTAAGTTGGAGAAATAGGAGGAGGTTGGGAAGTGGGGTGTGGAGGTG
GCGAGGTTTGGACAACATTTGGGGTATGATTTTGGTATGATTGTGTTGCA
GACAAGGAGAAGATTGTGGGCTTCTACTCGACAGCGTCTGAGATCCGTCC
CGCAGACCTGGACATTGACGTTTTGATTCGCAACTATTGCCCTTGCCCTG
TTCTGGTGTTGGTGGACGTGCGCCCTGCCGGCGGTGGGGCAAGTGAGAGT
CTTCCGGTGGCAGCGTACCGGTCCGTGGAGGTGGTGCGCGAAGGGAGGGA
GGCGGAGCGTGCCTTTGAGCACGTGACGGCCGAAGTTGGGGCGTATGAGG
CGGAGGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79932:250..957+

>mRNA_M-pyrifera_M_contig79932.18750.1 ID=mRNA_M-pyrifera_M_contig79932.18750.1|Name=mRNA_M-pyrifera_M_contig79932.18750.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig79932:250..957+ (Macrocystis pyrifera P11B4 male)
ATGCTGAATGTGGTGGATCACTACACGCGTGTGGCAAAAGGAGCTTCTCG
ACGAGCTGTCGGTATTTTGCTGGGTGAAACAGTGGGTTCGAAGGTGGATA
TTACCAACAGTTTTGCTGATGCTGAATGTGGTGGATCACTACACGCGTGT
GGCAAAAGGAGCTTCTCGACGAGCTGTCGGTATTTTGCTGGGTGAAACAG
TGGGTTCGAAGGTGGATATTACCAACAGTTTTGCTGTTCCATTCGACGAG
GACAGGAAAGATCCCAAGATTTGGTATCTGGATCATACGTATATGGAAAA
GATGTACAAGATGTTCCACAAAGTAGCCCTTCCATTCGACGAGGACAGGA
AAGATCCCAAGATTTGGTATCTGGATCATACGTATATGGAAAAGATGTAC
AAGATGTTCCACAAAGTAGCCCACAAGGAGAAGATTGTGGGCTTCTACTC
GACAGCGTCTGAGATCCGTCCCGCAGACCTGGACATTGACGTTTTGATTC
GCAACTATTGCCCTTGCCCTGTTCTGGTGTTGGTGGACGTGCGCCCTGCC
GGCGGTGGGGCAAGTGAGAGTCTTCCGGTGGCAGCGTACCGGTCCGTGGA
GGTGGTGCGCGAAGGGAGGGAGGCGGAGCGTGCCTTTGAGCACGTGACGG
CCGAAGTTGGGGCGTATGAGGCGGAGGAGACAAGGAGAAGATTGTGGGCT
TCTACTCGACAGCGTCTGAGATCCGTCCCGCAGACCTGGACATTGACGTT
TTGATTCGCAACTATTGCCCTTGCCCTGTTCTGGTGTTGGTGGACGTGCG
CCCTGCCGGCGGTGGGGCAAGTGAGAGTCTTCCGGTGGCAGCGTACCGGT
CCGTGGAGGTGGTGCGCGAAGGGAGGGAGGCGGAGCGTGCCTTTGAGCAC
GTGACGGCCGAAGTTGGGGCGTATGAGGCGGAGGAG
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