mRNA_M-pyrifera_M_contig79882.18743.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A482RP59_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RP59_9ARCH) HSP 1 Score: 99.8 bits (247), Expect = 1.200e-21 Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 121 LGVVVVVGALGFELWSTRFLLEKDGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPV-SPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLP 408 LG+ + L L+S+R + DG MSGGS WAD+P H+H++ SF+ GRN D+S+ + SP+FAG YP++PD+HAA++ RLG+S+R L P Sbjct: 81 LGITAMAAILFIPLYSSRMIPTVDGNIMSGGSCWADMPIHMHIVQSFIVGRNQDVSWGGMHSPVFAGELMYYPFIPDWHAAVMVRLGSSMRDGFLYP 177
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A7J7IM34_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM34_9RHOD) HSP 1 Score: 97.8 bits (242), Expect = 2.350e-20 Identity = 54/145 (37.24%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 121 LGVVVVVGALGFELWSTRFLLEK-DGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPVSPIF-AGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRMTGSLWLGVAGLAVLVLSGGIGALQLVRE 549 +G+V + + + + S+RFL E GA +SGG+ WADLPFH+++ SF++G N + ++ + F AG+ YP LPDFH+A L G S R S LLP+ L + GL A R+TG+ + +++ +GG GA + R+ Sbjct: 123 VGIVAMTAVVVWPMVSSRFLKEDPSGAVLSGGATWADLPFHMNIAASFLYGTNREFDYRRIEAAFYAGSRLVYPLLPDFHSACLRVAGMSWRLSFLLPALFLAVSGSGLLYAVNWRLTGNRAAAALSVVMVMCAGGTGAFEHWRQ 267
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: M1V8U3_CYAM1 (Uncharacterized protein n=2 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V8U3_CYAM1) HSP 1 Score: 97.1 bits (240), Expect = 4.350e-20 Identity = 57/151 (37.75%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 91 SPEVAEFGFVLGVVVVVGALGFELWSTRFLL-EKDGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPVSPIF-AGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRMTGSLWLGVAGLAVLVLSGGIGALQ 537 S +VA G +G + + + + S+RFL E DG+ SGG+ WADLPFH+++ SF++G N + ++ F AG+ YP LPDFHAA L G S R S LLP+ L + L A R+TGS V + +++ +GG G+ + Sbjct: 113 SAKVAPHGPGMGFTALTALIVWPMVSSRFLRNEPDGSVSSGGATWADLPFHMNIAASFLYGTNREFDYRRTEAAFYAGSRLVYPLLPDFHAACLLVSGMSWRMSFLLPALFLAVSASALLYAVNWRLTGSRAAAVLSVLLVMCAGGTGSFE 263
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A7J7IPB7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPB7_9RHOD) HSP 1 Score: 90.9 bits (224), Expect = 6.030e-18 Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 160 LWSTRFLLEK-DGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPV-SPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRMTGSLWLGVAGLAVLVLSGGIGALQ 537 ++S F LE DG W + G +W D+P H+H++ SF++G N + V SPI AG YP+L DFHAA L G S R ++ +PS L V L G+R+TGS+ + L +L+ SGG G ++ Sbjct: 131 IYSAHFTLEDVDGEWKTSGGSWGDIPLHLHLLTSFLYGSNKHFWYGRVESPISAGKLLAYPFLCDFHAAALVVGGFSWRNALRVPSLLLSASCVPLLFLLGERLTGSIGSALLSLGLLIWSGGTGYVE 258
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A482R8M2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R8M2_9ARCH) HSP 1 Score: 79.0 bits (193), Expect = 1.330e-14 Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 154 FELWSTRFLLEKD-GAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPV-SPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRMTGSLWLGVAGLAVLVLS 516 + L+STR L E + G ++ GS + DLP H+++ SF+ G N + S+ + S IFAGA TYP+LPDFHAAI LG +LR + L + L + RM+ S AGL +VL+ Sbjct: 109 WRLYSTRMLPEDEYGNIIAAGSCYGDLPIHMNIAQSFLIGANINFSWSNMHSTIFAGAPLTYPFLPDFHAAIFVVLGGTLRRAFLWTGVGMVLALFAAIYSLALRMSKS---PAAGLIAVVLT 228
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: UPI00199D7383 (Uncharacterized protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI00199D7383) HSP 1 Score: 77.0 bits (188), Expect = 3.890e-13 Identity = 54/155 (34.84%), Postives = 75/155 (48.39%), Query Frame = 1 Query: 1 IWIAFLLLVLFTLTRAREFLRKVRLLRARWSPEVAEFGFVLGVVVVVGALGFELWSTRFLLEKDGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPVSPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRM 465 +WI +LL L L R R R+ LL+ W E A VL + + + L+S L G SGG A+ DLP H+ V SF++G N + P+ P YP+LPDF A+L LG + RW++L S L L GL +R+ Sbjct: 8 VWIIAVLLWLELLRRIR---REDLLLKTLWRREYAGLALVLALFAPIY---WRLFSRHMLWPGAGGVYSGGGAYYDLPLHLAVSTSFLYGGNFPPIYTPLPP----EPLLYPFLPDFMTALLAALGMNFRWALLSTSIPLALATTGLFYLLAQRI 152
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A536MMF2_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536MMF2_9CHLR) HSP 1 Score: 70.9 bits (172), Expect = 2.260e-11 Identity = 52/160 (32.50%), Postives = 72/160 (45.00%), Query Frame = 1 Query: 79 RARWSPEVAEFGF---VLGVVVVVGALGFELWSTRFLLEKDGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPVSPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRMTGSLWLGVAGLAVLVLSGGIGALQLVRE 549 R RWS V G +L V+VV GA ++ G + + W D H+ SF +G N F P PI AG YP++ DF AA L R+G SL S+ S L L F G+ R S + + V +LSGG+G + L+ + Sbjct: 93 RGRWSMPVGASGHPWPLLAVMVVCGAWTIHFLHQAYVYTPAGLYAGYINVWGDWAVHLSFAGSFAYGHN----FPPEYPIDAGHRMGYPFMIDFLAADLVRVGLSLTESITATSAMLGLAFPGVLYLAALRFAASRVVAAVAVFVFLLSGGLGFVYLLSD 248
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A497IWH8_9EURY (Uncharacterized protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A497IWH8_9EURY) HSP 1 Score: 70.9 bits (172), Expect = 4.860e-11 Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 1 Query: 97 EVAEFGFVLGVVVVVGALGFELWS-----TRFLLEKDGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPVSPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRM 465 + E G V V V+ A+ F +++ T F+ DG +M AWAD H+H+I SFV+G++ F P P+ YP++ DF +AI +LG SLR S+++P+ L L V + + F + + Sbjct: 5 DAEEDGRVGSVSVIAAAVIFSIFAFLNLTTVFVEGSDGVYMME-DAWADHGLHIHIITSFVYGKD----FPPPYPVLVNTPLAYPFMADFISAIFLKLGFSLRASLVVPNLFLSLALVLVCLLFAEEV 127
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A7W0G4W7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W0G4W7_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 4.960e-11 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 226 DLPFHVHVINSFVFGRNADLSFKPVSPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRMTGSLWLGVAGLAVLVLSGGIGALQLVRE 549 DLPFH+ +I SFV+G N F P P FAG TYP++ DF AA+ R GA++ ++ ++ L L GL + ++T + A+++LSGG G L V+E Sbjct: 145 DLPFHLGIITSFVYGEN----FPPQHPEFAGVRLTYPFVVDFVAAMFVRAGATIGGALFWQNYVLALSLTGLLHRWALKLTRERVAALVTPALVLLSGGFGWLHFVKE 248
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Match: A0A536RY19_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536RY19_9CHLR) HSP 1 Score: 70.9 bits (172), Expect = 5.030e-11 Identity = 52/160 (32.50%), Postives = 72/160 (45.00%), Query Frame = 1 Query: 79 RARWSPEVAEFGF---VLGVVVVVGALGFELWSTRFLLEKDGAWMSGGSAWADLPFHVHVINSFVFGRNADLSFKPVSPIFAGASFTYPYLPDFHAAILHRLGASLRWSMLLPSFSLFLGFVGLSVAFGKRMTGSLWLGVAGLAVLVLSGGIGALQLVRE 549 R RWS V G +L V+VV GA ++ G + + W D H+ SF +G N F P PI AG YP++ DF AA L R+G SL S+ S L L F G+ R S + + V +LSGG+G + L+ + Sbjct: 93 RGRWSMPVGASGHPWPLLAVMVVCGAWTIHFLHQAYVYTPAGLYAGYINVWGDWAVHLSFAGSFAYGHN----FPPEYPIDAGHRMGYPFMIDFLAADLVRVGLSLTESITATSAMLGLAFPGVLYLAALRFAASRVVAAVAVFVFLLSGGLGFVYLLSD 248 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79882.18743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79882.18743.1 >prot_M-pyrifera_M_contig79882.18743.1 ID=prot_M-pyrifera_M_contig79882.18743.1|Name=mRNA_M-pyrifera_M_contig79882.18743.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp IWIAFLLLVLFTLTRAREFLRKVRLLRARWSPEVAEFGFVLGVVVVVGALback to top mRNA from alignment at M-pyrifera_M_contig79882:361..909+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79882.18743.1 ID=mRNA_M-pyrifera_M_contig79882.18743.1|Name=mRNA_M-pyrifera_M_contig79882.18743.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig79882:361..909+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79882:361..909+ >mRNA_M-pyrifera_M_contig79882.18743.1 ID=mRNA_M-pyrifera_M_contig79882.18743.1|Name=mRNA_M-pyrifera_M_contig79882.18743.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig79882:361..909+ (Macrocystis pyrifera P11B4 male)back to top |