mRNA_M-pyrifera_M_contig7986.18732.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: A0A6H5K9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M4_9PHAE) HSP 1 Score: 197 bits (501), Expect = 1.710e-58 Identity = 103/130 (79.23%), Postives = 117/130 (90.00%), Query Frame = 1 Query: 1 RASVPSPQPKPQVKGPSEVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQDDFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRTA 390 R VPSPQ KPQ K +EVTARHILVKHKGSRRPASWQDP+GV+I+QRTQGQA++ LQ LR GIK+Q+DFSKVA ++SDCSSAKRGGDLG+F RGKMQRAFEDAAFGL +GGLSGV+STDSG H+IMRTA Sbjct: 378 RMGVPSPQ-KPQPKPITEVTARHILVKHKGSRRPASWQDPSGVSIRQRTQGQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVGGLSGVVSTDSGVHLIMRTA 506
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: D7G0K6_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K6_ECTSI) HSP 1 Score: 143 bits (361), Expect = 7.100e-42 Identity = 76/100 (76.00%), Postives = 85/100 (85.00%), Query Frame = 1 Query: 10 VPSPQPKPQVKGPSEVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQDDFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFED 309 VPSPQ KPQ K +EVTARHILVKHKGSRRPASWQDPAG +IKQRTQ QA++ LQ LR GIK+Q+DFSKVA ++SDCSSAKRGGDLG+F RGKMQ D Sbjct: 3 VPSPQ-KPQPKAITEVTARHILVKHKGSRRPASWQDPAGASIKQRTQAQAASILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQLGCSD 101
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: A0A836CKW2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW2_9STRA) HSP 1 Score: 130 bits (328), Expect = 6.360e-37 Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 1 Query: 55 VTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQDDFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRT 387 + ARHILVKH+GSRRPASW+DP G+ I R++ QA A L +R I+T +DF++VA + SDCSSA+ GGDLG F G+MQ+AFED L +G +SGV+ +DSG H+I+RT Sbjct: 1 MRARHILVKHQGSRRPASWKDPEGIEISARSREQAIAMLNDIRASIRTPEDFARVAQTASDCSSARNGGDLGEFGPGQMQKAFEDGVLALGVGDISGVVESDSGVHIILRT 111
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: C1FHU5_MICCC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FHU5_MICCC) HSP 1 Score: 123 bits (309), Expect = 5.530e-34 Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 49 SEVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQD-DFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRTA 390 SEV A H+LVKH+GSRRPASW+DP G I +R++ A L+A R I++ F+ +A SDCSSAK GGDLG F GKMQ+AFED AF L++G +SGVI +DSG H+I+RTA Sbjct: 2 SEVRASHLLVKHQGSRRPASWRDPEGAVITKRSKAAALDELEAYREQIESGAVTFADLAAKVSDCSSAKHGGDLGFFGPGKMQKAFEDGAFALQVGEMSGVIDSDSGVHIILRTA 116
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: A0A843V534_COLES (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843V534_COLES) HSP 1 Score: 123 bits (308), Expect = 9.380e-34 Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 52 EVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKT-QDDFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRT 387 +V+A HIL+KH+GSRR ASWQDP GV I+ T+ A L+ALR I + + F VA SDCS+AKRGGDLG F RG+MQ+ FEDAAF L IG +S ++ TDSG H+I+RT Sbjct: 9 QVSASHILIKHEGSRRKASWQDPDGVRIRSTTRDSAVEQLRALREEIASGKASFEDVASRHSDCSTAKRGGDLGPFKRGQMQKPFEDAAFALEIGEISNIVDTDSGVHIILRT 121
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: A0A7S2Y508_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y508_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.530e-33 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 49 SEVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQDDFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRT 387 S+V A H+L+KH GSRRPASW+DP G I+ R++ QA LQ LR I +DF+ +A SDCSSA+ GGDLG F G+M + FEDA L+IG +SGV+ TDSG H+I+RT Sbjct: 2 SQVRASHLLIKHSGSRRPASWKDPDGNEIRARSRDQAVQILQTLRSQISGPEDFANLAAQHSDCSSARNGGDLGPFGPGQMMKPFEDATRALQIGEISGVVDTDSGVHIILRT 114
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: A0A7I8KQ91_SPIIN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KQ91_SPIIN) HSP 1 Score: 122 bits (305), Expect = 2.600e-33 Identity = 66/114 (57.89%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 52 EVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQD-DFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRTA 390 +V A HIL+KH+GSRR ASW+DP GV I+ + A A L+ALR I + F VA SDCSSAKRGGDLG F RG+MQRAFED AF L +G +S ++ TDSG H+I+RTA Sbjct: 8 QVKASHILIKHEGSRRKASWKDPDGVRIQSTRRDSAVAQLKALREEIISGSATFEDVASRHSDCSSAKRGGDLGPFKRGQMQRAFEDVAFSLNVGEISDIVDTDSGVHIILRTA 121
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: A0A368QB04_SETIT (Peptidyl-prolyl cis-trans isomerase (Fragment) n=4 Tax=Setaria TaxID=4554 RepID=A0A368QB04_SETIT) HSP 1 Score: 124 bits (311), Expect = 2.980e-33 Identity = 66/116 (56.90%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 43 GPSEVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQD-DFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRT 387 G +V A HIL+KH+GSRR ASW+DP GVAI T+ A+ +ALR I + D F +A SDC+SAKRGGDLGSF RGKMQ+AFE AAF L++G +S V+ T+SG H+I RT Sbjct: 83 GEEKVRASHILIKHEGSRRKASWRDPEGVAISATTRDDAADLARALREQIVSGDRKFEDIAAENSDCNSAKRGGDLGSFGRGKMQKAFEKAAFALKVGEISDVVDTESGVHIIKRT 198
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: UPI0009E34258 (peptidyl-prolyl cis-trans isomerase Pin1 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E34258) HSP 1 Score: 121 bits (304), Expect = 3.470e-33 Identity = 64/113 (56.64%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 55 VTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKT-QDDFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRTA 390 V A HIL+KH+GSRR ASW+DP G I ++ +A+A L LR I + Q F ++A SDCSSAKRGGDLG F RG+MQ+ FE+AAFGL +G +SG++ TDSG H+I RTA Sbjct: 7 VKASHILIKHEGSRRKASWKDPDGRVISTTSRDEAAAQLTDLREKIVSGQAQFDEIASRYSDCSSAKRGGDLGRFGRGQMQKPFEEAAFGLEVGEISGIVDTDSGVHIIKRTA 119
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Match: A0A1Z5RGG3_SORBI (Peptidyl-prolyl cis-trans isomerase (Fragment) n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5RGG3_SORBI) HSP 1 Score: 124 bits (311), Expect = 3.700e-33 Identity = 67/120 (55.83%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 31 PQVKGPSEVTARHILVKHKGSRRPASWQDPAGVAIKQRTQGQASATLQALRRGIKTQD-DFSKVAMSKSDCSSAKRGGDLGSFARGKMQRAFEDAAFGLRIGGLSGVISTDSGEHVIMRT 387 P +V A HIL+KH+GSRR ASW+DP GVAI T+ A+ ++ALR I + D F +A SDCSSAKRGGDLGSF RGKMQ+AFE AAF L++G +S V+ T+SG H+I RT Sbjct: 87 PSSSAEEKVRASHILIKHEGSRRKASWRDPEGVAISATTRDDAADLVRALRDQIVSGDRKFEDIAAENSDCSSAKRGGDLGSFGRGKMQKAFEKAAFALKVGEISDVVDTESGVHIIKRT 206 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7986.18732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7986.18732.1 >prot_M-pyrifera_M_contig7986.18732.1 ID=prot_M-pyrifera_M_contig7986.18732.1|Name=mRNA_M-pyrifera_M_contig7986.18732.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp RASVPSPQPKPQVKGPSEVTARHILVKHKGSRRPASWQDPAGVAIKQRTQback to top mRNA from alignment at M-pyrifera_M_contig7986:2639..5078- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7986.18732.1 ID=mRNA_M-pyrifera_M_contig7986.18732.1|Name=mRNA_M-pyrifera_M_contig7986.18732.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2440bp|location=Sequence derived from alignment at M-pyrifera_M_contig7986:2639..5078- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7986:2639..5078- >mRNA_M-pyrifera_M_contig7986.18732.1 ID=mRNA_M-pyrifera_M_contig7986.18732.1|Name=mRNA_M-pyrifera_M_contig7986.18732.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig7986:2639..5078- (Macrocystis pyrifera P11B4 male)back to top |