mRNA_M-pyrifera_M_contig79652.18694.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79652.18694.1
Unique NamemRNA_M-pyrifera_M_contig79652.18694.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: UPI0009B416E9 (elongation factor 1-alpha 1-like n=1 Tax=Monopterus albus TaxID=43700 RepID=UPI0009B416E9)

HSP 1 Score: 370 bits (950), Expect = 7.300e-126
Identity = 182/222 (81.98%), Postives = 203/222 (91.44%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKK-EKEGKVTKAAQKA 663
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFAP N+TTEVKSVEMHHE LTEA+PGDNVGFNVKNVSVKDIRRGNVAG+SK+DPP+EAA F AQVI+LNHPGQI AGYAPV+DCHTAHIACK+A+L +KIDRRSGK LE++PK +K  DAA+VDMIP KPMCVE+F+EY PLGRFAVRDMRQTVAVGVIKGV KK    GK+TK+AQKA
Sbjct:  167 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALTEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPPLGRFAVRDMRQTVAVGVIKGVEKKVSTTGKITKSAQKA 388
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: Q4QEI8_LEIMA (Elongation factor 1-alpha n=20 Tax=Eukaryota TaxID=2759 RepID=Q4QEI8_LEIMA)

HSP 1 Score: 372 bits (955), Expect = 8.200e-126
Identity = 184/225 (81.78%), Postives = 204/225 (90.67%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKKEKEG-KVTKAAQKAGKK 672
            PPVRPVDKPLR+PLQDVYKIGGIGTVPVGRVETG++KPG +VTFAPAN+TTEVKS+EMHHEQL EA PGDNVGFNVKNVSVKDIRRGNV GNSK+DPPKEAA+F AQVIVLNHPGQI  GYAPV+DCHT+HIAC++A++  KIDRRSGK LE++PK IK  DAA+V M+PQKPMCVE FN+YAPLGRFAVRDMRQTVAVG+IKGV KKE  G KVTKAA KA KK
Sbjct:  225 PPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRGNVCGNSKNDPPKEAADFTAQVIVLNHPGQISNGYAPVLDCHTSHIACRFAEIESKIDRRSGKELEKNPKAIKSGDAAIVKMVPQKPMCVEVFNDYAPLGRFAVRDMRQTVAVGIIKGVNKKEGSGGKVTKAAAKASKK 449
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: A0A4W6DZH0_LATCA (Elongation factor 1-alpha 1-like n=6 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6DZH0_LATCA)

HSP 1 Score: 370 bits (950), Expect = 8.910e-126
Identity = 182/222 (81.98%), Postives = 203/222 (91.44%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKK-EKEGKVTKAAQKA 663
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFAP N+TTEVKSVEMHHE LTEA+PGDNVGFNVKNVSVKDIRRGNVAG+SK+DPP+EAA F AQVI+LNHPGQI AGYAPV+DCHTAHIACK+A+L +KIDRRSGK LE++PK +K  DAA+VDMIP KPMCVE+F+EY PLGRFAVRDMRQTVAVGVIKGV KK    GK+TK+AQKA
Sbjct:  173 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALTEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPPLGRFAVRDMRQTVAVGVIKGVEKKVSTTGKITKSAQKA 394
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: A0A667XEG2_9TELE (Elongation factor 1-alpha 1 n=2 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A667XEG2_9TELE)

HSP 1 Score: 370 bits (949), Expect = 1.310e-125
Identity = 183/226 (80.97%), Postives = 205/226 (90.71%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKK-EKEGKVTKAAQKAGKKK 675
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETG+LKPG++VTFAP N+TTEVKSVEMHHE LTEA+PGDNVGFNVKNVSVKDIRRGNVAG+SK+DPP+EAA F AQVI+LNHPGQI AGYAPV+DCHTAHIACK+A+L +KIDRRSGK LE++PK +K  DAA+VDMIP KPMCVE+F+EY PLGRFAVRDMRQTVAVGVIKGV KK    GK+TK+AQKA K K
Sbjct:  174 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGLVVTFAPVNVTTEVKSVEMHHEALTEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMIPGKPMCVESFSEYPPLGRFAVRDMRQTVAVGVIKGVEKKVSTTGKITKSAQKAQKNK 399
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: K7P5N1_RHIDO (Eukaryotic translation elongation factor 1 alpha 1 (Fragment) n=3 Tax=Tetrapoda TaxID=32523 RepID=K7P5N1_RHIDO)

HSP 1 Score: 365 bits (936), Expect = 1.580e-125
Identity = 181/224 (80.80%), Postives = 202/224 (90.18%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKKEK-EGKVTKAAQKAGK 669
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETGVLKPGM+VTFAP N+TTEVKSVEMHHE LTEAVPGDNVGFNVKNVSVKD+RRGNVAG+SK+DPP+EA  F AQVI+LNHPGQI AGYAPV+DCHTAHIACK+A+L +KIDRRSGK LE++PK +K  DAA+VDM+P KPMCVE+F++Y PLGRFAVRDMRQTVAVGVIK V KK    GKVTK+AQKA K
Sbjct:   48 PPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPQEAGGFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVEKKAAGAGKVTKSAQKAQK 271
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: A0A8D8J8I3_CULPI (Elongation factor 1-alpha 1 n=3 Tax=cellular organisms TaxID=131567 RepID=A0A8D8J8I3_CULPI)

HSP 1 Score: 363 bits (931), Expect = 1.870e-125
Identity = 180/224 (80.36%), Postives = 201/224 (89.73%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKKEK-EGKVTKAAQKAGK 669
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETGVLKPGM+VTFAP N+TTEVKSVEMHHE L+EA+PGDNVGFNVKNVSVKD+RRGNVAG+SK+DPP EAA F AQVI+LNHPGQI AGYAPV+DCHTAHIACK+A+L +KIDRRSGK LE+ PK +K  DAA+VDM+P KPMCVE+F++Y PLGRFAVRDMRQTVAVGVIK V KK    GKVTK+AQKA K
Sbjct:    1 PPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQK 224
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: Q6P082_HUMAN (EEF1A1 protein (Fragment) n=2 Tax=Boreoeutheria TaxID=1437010 RepID=Q6P082_HUMAN)

HSP 1 Score: 363 bits (933), Expect = 2.240e-125
Identity = 180/224 (80.36%), Postives = 201/224 (89.73%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKKEK-EGKVTKAAQKAGK 669
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETGVLKPGM+VTFAP N+TTEVKSVEMHHE L+EA+PGDNVGFNVKNVSVKD+RRGNVAG+SK+DPP EAA F AQVI+LNHPGQI AGYAPV+DCHTAHIACK+A+L +KIDRRSGK LE+ PK +K  DAA+VDM+P KPMCVE+F++Y PLGRFAVRDMRQTVAVGVIK V KK    GKVTK+AQKA K
Sbjct:   26 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQK 249
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: E9AGP7_LEIIN (Elongation factor 1-alpha n=1 Tax=Leishmania infantum TaxID=5671 RepID=E9AGP7_LEIIN)

HSP 1 Score: 371 bits (952), Expect = 2.340e-125
Identity = 183/225 (81.33%), Postives = 204/225 (90.67%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKKEKEG-KVTKAAQKAGKK 672
            PPVRPVDKP+R+PLQDVYKIGGIGTVPVGRVETG++KPG +VTFAPAN+TTEVKS+EMHHEQL EA PGDNVGFNVKNVSVKDIRRGNV GNSK+DPPKEAA+F AQVIVLNHPGQI  GYAPV+DCHT+HIAC++A++  KIDRRSGK LE++PK IK  DAA+V M+PQKPMCVE FN+YAPLGRFAVRDMRQTVAVG+IKGV KKE  G KVTKAA KA KK
Sbjct:  225 PPVRPVDKPVRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRGNVCGNSKNDPPKEAADFTAQVIVLNHPGQISNGYAPVLDCHTSHIACRFAEIESKIDRRSGKELEKNPKAIKSGDAAIVKMVPQKPMCVEVFNDYAPLGRFAVRDMRQTVAVGIIKGVNKKEGSGGKVTKAAAKAAKK 449
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BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: A0A674PM32_TAKRU (Elongation factor 1-alpha n=12 Tax=Percomorphaceae TaxID=1489872 RepID=A0A674PM32_TAKRU)

HSP 1 Score: 370 bits (951), Expect = 2.650e-125
Identity = 183/222 (82.43%), Postives = 203/222 (91.44%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKK-EKEGKVTKAAQKA 663
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETGVLKPGM+VTFAP N+TTEVKSVEMHHE LTEA+PGDNVGFNVKNVSVKDIRRGNVAG+SK+DPP+EAA F AQVI+LNHPGQI AGYAPV+DCHTAHIACK+A+L +KIDRRSGK LE++PK +K  DAA+VDM+P KPMCVE+F+EY PLGRFAVRDMRQTVAVGVIKGV KK    GKVTK+AQKA
Sbjct:  217 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALTEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPPLGRFAVRDMRQTVAVGVIKGVEKKVSTTGKVTKSAQKA 438
[Close]
BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Match: A0A1A8N6U8_9TELE (Eukaryotic translation elongation factor 1 alpha 1a (Fragment) n=3 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8N6U8_9TELE)

HSP 1 Score: 364 bits (935), Expect = 3.650e-125
Identity = 181/224 (80.80%), Postives = 203/224 (90.62%), Query Frame = 1 
Query:    1 PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANITTEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKEAAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKILEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVGVIKGVTKKEK-EGKVTKAAQKAGK 669
            PP RP DKPLR+PLQDVYKIGGIGTVPVGRVETGVLKPGM+VTFAP N+TTEVKSVEMHHE L+EA+PGDNVGFNVKNVSVKDIRRGNVAG+S++DPP+EAA F +QVI+LNHPGQI  GYAPV+DCHTAHIACK+A+L +KIDRRSGK LE++PK +K  DAA+VDMIP KPMCVE+F+EY PLGRFAVRDMRQTVAVGVIKGV KK    GKVTK+AQKA K
Sbjct:   60 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAAGFTSQVIILNHPGQIAQGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPPLGRFAVRDMRQTVAVGVIKGVEKKAPTSGKVTKSAQKAQK 283
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79652.18694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0009B416E97.300e-12681.98elongation factor 1-alpha 1-like n=1 Tax=Monopteru... [more]
Q4QEI8_LEIMA8.200e-12681.78Elongation factor 1-alpha n=20 Tax=Eukaryota TaxID... [more]
A0A4W6DZH0_LATCA8.910e-12681.98Elongation factor 1-alpha 1-like n=6 Tax=Percomorp... [more]
A0A667XEG2_9TELE1.310e-12580.97Elongation factor 1-alpha 1 n=2 Tax=Euacanthomorph... [more]
K7P5N1_RHIDO1.580e-12580.80Eukaryotic translation elongation factor 1 alpha 1... [more]
A0A8D8J8I3_CULPI1.870e-12580.36Elongation factor 1-alpha 1 n=3 Tax=cellular organ... [more]
Q6P082_HUMAN2.240e-12580.36EEF1A1 protein (Fragment) n=2 Tax=Boreoeutheria Ta... [more]
E9AGP7_LEIIN2.340e-12581.33Elongation factor 1-alpha n=1 Tax=Leishmania infan... [more]
A0A674PM32_TAKRU2.650e-12582.43Elongation factor 1-alpha n=12 Tax=Percomorphaceae... [more]
A0A1A8N6U8_9TELE3.650e-12580.80Eukaryotic translation elongation factor 1 alpha 1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79652contigM-pyrifera_M_contig79652:281..958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.9
Seed ortholog evalue1.1e-100
Seed eggNOG ortholog5664.LmjF.17.0080
Preferred nameTEF1
KEGG koko:K03231
KEGG Pathwayko03013,ko05134,map03013,map05134
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000302,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001882,GO:0001883,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003779,GO:0003785,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005516,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005853,GO:0005938,GO:0006403,GO:0006405,GO:0006409,GO:0006412,GO:0006414,GO:0006469,GO:0006518,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007154,GO:0007165,GO:0008092,GO:0008104,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009268,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010446,GO:0010467,GO:0010563,GO:0010605,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017016,GO:0017048,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019220,GO:0019222,GO:0019538,GO:0019722,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022607,GO:0023052,GO:0030027,GO:0030029,GO:0030036,GO:0030175,GO:0031090,GO:0031143,GO:0031252,GO:0031267,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031503,GO:0031667,GO:0031668,GO:0031669,GO:0032268,GO:0032269,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033554,GO:0033673,GO:0034198,GO:0034613,GO:0034641,GO:0034645,GO:0035556,GO:0035639,GO:0036094,GO:0042221,GO:0042325,GO:0042326,GO:0042594,GO:0042886,GO:0042995,GO:0043021,GO:0043022,GO:0043043,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045859,GO:0045936,GO:0046907,GO:0048519,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051015,GO:0051017,GO:0051020,GO:0051031,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061572,GO:0065007,GO:0065009,GO:0070727,GO:0071166,GO:0071426,GO:0071431,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0097064,GO:0097159,GO:0097367,GO:0097435,GO:0098588,GO:0098805,GO:0098852,GO:0098858,GO:0099568,GO:0120025,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904,GO:1990928
EggNOG free text desc.regulation of response to stimulus
EggNOG OGs3XTPH@5653,COG5256@1,KOG0052@2759
COG Functional cat.J
Best tax levelKinetoplastida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012,ko03016,ko03019,ko04131,ko04147
Exons1
Model size678
Cds size678
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816700.1837838-CDS-M-pyrifera_M_contig79652:280..9581622816700.1837838-CDS-M-pyrifera_M_contig79652:280..958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79652 281..958 -
1692278127.425918-CDS-M-pyrifera_M_contig79652:280..9581692278127.425918-CDS-M-pyrifera_M_contig79652:280..958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79652 281..958 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79652.18694.1prot_M-pyrifera_M_contig79652.18694.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79652 281..958 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79652.18694.1

>prot_M-pyrifera_M_contig79652.18694.1 ID=prot_M-pyrifera_M_contig79652.18694.1|Name=mRNA_M-pyrifera_M_contig79652.18694.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
PPVRPVDKPLRVPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANIT
TEVKSVEMHHEQLTEAVPGDNVGFNVKNVSVKDIRRGNVAGNSKDDPPKE
AAEFHAQVIVLNHPGQIHAGYAPVIDCHTAHIACKWAKLCQKIDRRSGKI
LEESPKMIKQHDAALVDMIPQKPMCVETFNEYAPLGRFAVRDMRQTVAVG
VIKGVTKKEKEGKVTKAAQKAGKKK*
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mRNA from alignment at M-pyrifera_M_contig79652:281..958-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79652.18694.1 ID=mRNA_M-pyrifera_M_contig79652.18694.1|Name=mRNA_M-pyrifera_M_contig79652.18694.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig79652:281..958- (Macrocystis pyrifera P11B4 male)
CCCCCGGTGCGCCCCGTCGACAAGCCTCTCCGCGTTCCCCTCCAGGACGT
GTACAAGATCGGTGGTATCGGAACGGTACCCGTCGGTCGCGTCGAGACTG
GTGTCCTCAAGCCCGGCATGATCGTGACCTTCGCCCCCGCCAACATCACC
ACTGAGGTCAAGTCTGTGGAGATGCACCACGAGCAGCTCACCGAGGCTGT
CCCCGGAGACAACGTTGGCTTCAACGTCAAGAACGTCTCCGTCAAGGACA
TCCGCCGTGGCAACGTCGCTGGCAACTCTAAGGACGACCCCCCGAAGGAG
GCCGCTGAGTTCCACGCCCAGGTCATCGTTCTCAACCACCCTGGCCAGAT
CCATGCCGGCTACGCGCCCGTGATCGATTGCCACACCGCTCACATTGCCT
GCAAGTGGGCCAAGCTCTGCCAGAAGATCGATCGCCGCTCTGGCAAGATC
CTCGAGGAGTCCCCCAAGATGATCAAGCAGCACGATGCTGCCCTCGTCGA
CATGATCCCCCAGAAGCCCATGTGCGTTGAGACCTTCAACGAGTACGCTC
CTCTCGGTCGCTTCGCCGTGCGTGACATGCGCCAGACCGTTGCCGTCGGT
GTCATCAAGGGAGTGACGAAGAAGGAGAAGGAGGGTAAGGTGACCAAGGC
CGCCCAGAAGGCTGGCAAGAAGAAGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79652:281..958-

>mRNA_M-pyrifera_M_contig79652.18694.1 ID=mRNA_M-pyrifera_M_contig79652.18694.1|Name=mRNA_M-pyrifera_M_contig79652.18694.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig79652:281..958- (Macrocystis pyrifera P11B4 male)
CCCCCGGTGCGCCCCGTCGACAAGCCTCTCCGCGTTCCCCTCCAGGACGT
GTACAAGATCGGTGGTATCGGAACGGTACCCGTCGGTCGCGTCGAGACTG
GTGTCCTCAAGCCCGGCATGATCGTGACCTTCGCCCCCGCCAACATCACC
ACTGAGGTCAAGTCTGTGGAGATGCACCACGAGCAGCTCACCGAGGCTGT
CCCCGGAGACAACGTTGGCTTCAACGTCAAGAACGTCTCCGTCAAGGACA
TCCGCCGTGGCAACGTCGCTGGCAACTCTAAGGACGACCCCCCGAAGGAG
GCCGCTGAGTTCCACGCCCAGGTCATCGTTCTCAACCACCCTGGCCAGAT
CCATGCCGGCTACGCGCCCGTGATCGATTGCCACACCGCTCACATTGCCT
GCAAGTGGGCCAAGCTCTGCCAGAAGATCGATCGCCGCTCTGGCAAGATC
CTCGAGGAGTCCCCCAAGATGATCAAGCAGCACGATGCTGCCCTCGTCGA
CATGATCCCCCAGAAGCCCATGTGCGTTGAGACCTTCAACGAGTACGCTC
CTCTCGGTCGCTTCGCCGTGCGTGACATGCGCCAGACCGTTGCCGTCGGT
GTCATCAAGGGAGTGACGAAGAAGGAGAAGGAGGGTAAGGTGACCAAGGC
CGCCCAGAAGGCTGGCAAGAAGAAGTAACCCCCGGTGCGCCCCGTCGACA
AGCCTCTCCGCGTTCCCCTCCAGGACGTGTACAAGATCGGTGGTATCGGA
ACGGTACCCGTCGGTCGCGTCGAGACTGGTGTCCTCAAGCCCGGCATGAT
CGTGACCTTCGCCCCCGCCAACATCACCACTGAGGTCAAGTCTGTGGAGA
TGCACCACGAGCAGCTCACCGAGGCTGTCCCCGGAGACAACGTTGGCTTC
AACGTCAAGAACGTCTCCGTCAAGGACATCCGCCGTGGCAACGTCGCTGG
CAACTCTAAGGACGACCCCCCGAAGGAGGCCGCTGAGTTCCACGCCCAGG
TCATCGTTCTCAACCACCCTGGCCAGATCCATGCCGGCTACGCGCCCGTG
ATCGATTGCCACACCGCTCACATTGCCTGCAAGTGGGCCAAGCTCTGCCA
GAAGATCGATCGCCGCTCTGGCAAGATCCTCGAGGAGTCCCCCAAGATGA
TCAAGCAGCACGATGCTGCCCTCGTCGACATGATCCCCCAGAAGCCCATG
TGCGTTGAGACCTTCAACGAGTACGCTCCTCTCGGTCGCTTCGCCGTGCG
TGACATGCGCCAGACCGTTGCCGTCGGTGTCATCAAGGGAGTGACGAAGA
AGGAGAAGGAGGGTAAGGTGACCAAGGCCGCCCAGAAGGCTGGCAAGAAG
AAGTAA
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