mRNA_M-pyrifera_M_contig79599.18684.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79599.18684.1
Unique NamemRNA_M-pyrifera_M_contig79599.18684.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: A0A7S2RBC4_9STRA (Triosephosphate isomerase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBC4_9STRA)

HSP 1 Score: 252 bits (643), Expect = 4.830e-80
Identity = 128/237 (54.01%), Postives = 167/237 (70.46%), Query Frame = 1
Query:   16 SMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING 726
            S LNS  +    EVV+ PP+++       +RDD  VGVQDV  +G GA+TGE +A M   +GA +A+VGHSERR KGETDAD A KA    ++G+  I C+GE+LEERE G+TLEVV  Q+ AY   +  +W + VVAYEP+WAIGTG  A+P Q QEVH+ +RGWF  NV  + A+ +R+IYGGS  G+ + EL+   D+DGFLVGGASL+P+F DI+N RG   T+GPIR+GING
Sbjct:   18 STLNSADLSKDTEVVICPPAMYTGSTIGKVRDDVAVGVQDVWMNGAGAYTGETSAEMAGDLGAKWALVGHSERRGKGETDADVAAKAAYALDKGLGVIACIGESLEEREAGKTLEVVSAQVAAYATQI-SDWSNVVVAYEPIWAIGTGLTASPEQAQEVHEALRGWFSKNVSPEVANDLRIIYGGSASGKTAPELSSKPDIDGFLVGGASLKPEFVDIVNCRGTANTAGPIRIGING 253          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: L7QGY5_9STRA (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Bicosoeca sp. NIES-1438 TaxID=1273436 RepID=L7QGY5_9STRA)

HSP 1 Score: 259 bits (661), Expect = 4.880e-80
Identity = 138/242 (57.02%), Postives = 169/242 (69.83%), Query Frame = 1
Query:    1 MQGWVSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING 726
            +Q WV  LN+  +    EVVVAPP++++D V++ LR D  V  QD    G GA+TGE +A M    G  + I+GHSERRAKGET+A+ A KA    + G+  I C+GET EERE G+T+EV++ Q+ AY   V ++W   VVAYEPVWAIGTGK ATP Q QEVH  +R W + NV  DAAD VR+IYGGSV G N AEL  L DVDGFLVGGASL+P+F DI NA GG + SGPIRVGING
Sbjct:    5 VQQWVKTLNTGDIGRDAEVVVAPPAMYLDTVKKTLRADIHVAAQDAWTVGNGAYTGETSATMLADAGLKYTIIGHSERRAKGETNAEVATKAAFAIDNGLTVIACIGETDEEREAGKTMEVLVAQMSAYADHV-RDWSKVVVAYEPVWAIGTGKTATPAQAQEVHAALRAWLKDNVSSDAADNVRIIYGGSVNGGNCAELGALPDVDGFLVGGASLKPEFVDITNATGGPS-SGPIRVGING 244          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: A0A5A8C6L9_CAFRO (Gp_dh_N domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8C6L9_CAFRO)

HSP 1 Score: 253 bits (647), Expect = 2.060e-77
Identity = 143/245 (58.37%), Postives = 174/245 (71.02%), Query Frame = 1
Query:    1 MQGWVSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINAR---GGKATSGPIRVGING 726
            ++ WV+ LN+ +V   VEVV+APPS+++DRV  GLR DFGV  QD  A G GAHTGE++AAM    G  ++I+GHSERRA+GETD + A KA    + GM  I C+GETLEERE G+T EVV RQL AY   + +   + V+AYEPVWAIG+GKVATP Q QEVH  +R W   NV  +AA A R+IYGGSV G N+A LA L DVDGFLVGGASL+P+F DIINA    G KA  GP+ V ING
Sbjct:   34 VESWVAALNAGKVLPDVEVVIAPPSLYLDRVSGGLRTDFGVAAQDCFALG-GAHTGELSAAMLADAGVGYSIIGHSERRARGETDLEVAEKAAVAAKAGMVVIACIGETLEEREAGKTFEVVTRQLGAYASQM-QGLKNVVIAYEPVWAIGSGKVATPEQAQEVHAALRKWIGDNVSAEAAAATRIIYGGSVNGANAASLAALPDVDGFLVGGASLKPEFVDIINASNPTGDKA--GPVNVAING 274          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: A0A0A6YYW3_SACLA (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=A0A0A6YYW3_SACLA)

HSP 1 Score: 249 bits (637), Expect = 2.690e-76
Identity = 127/238 (53.36%), Postives = 166/238 (69.75%), Query Frame = 1
Query:   13 VSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING 726
            V +LN+  + +  EVVVAPPSV++  V + LR D  V  QD    G GA TGE +A M + +G ++ I+GHSERR KGETDA+CA KA   QE G+  + C+GE+ EERE G T++VV+RQ+ AY G V K+W +FVVAYEPVWAIGTG  A+P Q QEVH+G+R W   NV    A+ +R+IYGGSV   ++  L    D+DGFLVGGASL+P+F DI+NA+ G  + GP+ VGING
Sbjct:   51 VGVLNASNITSNTEVVVAPPSVYLHGVSQKLRGDVKVAAQDCWTKGNGAFTGETSADMLKDMGVNWCIIGHSERRQKGETDAECAAKAAYAQEHGLSVMGCIGESKEERESGSTMDVVLRQMAAYAGSV-KDWDNFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSASVAEKIRIIYGGSVNAGSAPTLGAKADIDGFLVGGASLKPEFVDIVNAKDGSKSVGPVTVGING 287          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: D7FP79_ECTSI (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP79_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 1.590e-73
Identity = 125/238 (52.52%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   13 VSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING 726
            V +LN+  + +  EVVVAPPSV++  V + LR D  V  QD    G GA+TGE +A M + +G  + I+GHSERR KGET+ +CAVKA   QE G+  + C+GE+ EERE G T++VV+ QL+AY   V K+W  FV+AYEPVWAIGTG  A+P Q QEVH+G+R W   NV    AD VR+IYGGSV   ++  L    D+DGFLVGGASL+P+F +I+NA+ G  + GP+ VGING
Sbjct:   25 VGVLNASNITSNTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGSTMDVVIGQLKAYAASV-KDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGING 261          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: D8LXP8_BLAHO (Glyceraldehyde 3-phosphate dehydrogenase n=5 Tax=Blastocystis TaxID=12967 RepID=D8LXP8_BLAHO)

HSP 1 Score: 237 bits (604), Expect = 4.990e-71
Identity = 126/242 (52.07%), Postives = 165/242 (68.18%), Query Frame = 1
Query:    1 MQGWVSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING 726
            +Q  VS LN+  +++  EVV+APP+ ++      +R D  V  QDV + G GA TGE +A M + +   +AIVGHSERR KGE+DA+ A KA   Q+ G++ I C+GE+L+ERE GR  EVV RQL+AY   + K W D V+AYEP+WAIGTGKVATP Q +EVH  +R W + NV    AD VR+IYGGSV  +N  EL +  D+DGFLVGGASL+P+F +IINA      +GP+ VGING
Sbjct:   34 VQEIVSTLNASNLNSDAEVVIAPPTAYLRDTVSTVRPDVQVAAQDVWSQGNGAFTGETSAEMLKDLKVGWAIVGHSERRGKGESDAEVATKAAYAQKNGLKVICCLGESLQERESGRFAEVVTRQLKAYADAI-KNWDDAVIAYEPIWAIGTGKVATPAQAEEVHAILRKWLRENVSGAVADKVRIIYGGSVNAKNCNELGKQADIDGFLVGGASLKPEFVNIINANSTVKNAGPVNVGING 274          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: A0A835ZGW0_9STRA (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW0_9STRA)

HSP 1 Score: 234 bits (597), Expect = 6.360e-70
Identity = 122/240 (50.83%), Postives = 165/240 (68.75%), Query Frame = 1
Query:   13 VSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGV--GKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING 726
            V +LN+  + +  EVV++PPS+++  V   +R D  V  QD C  G GAHTGE +A M + +G  + IVGHSERR KGETD  CA KA     +G++ + C+GET EERE G+T+EVV+RQ+ AY   +   K +  FVVAYEPVWAIGTG VATP + Q+VH+G+R W   N+  D A  +R++YGGSV   ++  LA   D+DGFLVGGASL+P+F  I+NA+G   ++GP+RVGING
Sbjct:   45 VGILNASSLASDTEVVISPPSLYLQSVASSIRPDVAVSSQD-CWTGNGAHTGETSADMLKDMGVQWTIVGHSERRQKGETDELCAKKAAYAISKGLKVMACIGETREEREAGKTMEVVVRQMAAYKKHLDSSKAFDAFVVAYEPVWAIGTGLVATPEEAQQVHKGLRDWVANNISSDVAAKLRIMYGGSVTAASAPSLASQPDIDGFLVGGASLKPEFVSIVNAQGSSGSAGPVRVGING 283          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: A0A418B8D3_9STRA (Gp_dh_N domain-containing protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A418B8D3_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.090e-69
Identity = 130/240 (54.17%), Postives = 162/240 (67.50%), Query Frame = 1
Query:   13 VSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATS--GPIRVGING 726
            V  LN+  + A VEVVVAPP++ V  V   LR D GV  QDV   G GA+TGEV+A + +  GAD++IVGHSERR KGE++ + A KA     +G+  I C+GET  +RE  +TL+VV  QL AY   V K+W   VVAYEPVWAIGTG  A+P Q QEVH  IR W + NV   AAD+ R+IYGGSV   N++EL+   D+DGFLVGGASL+P F  IINA+GG  T+  GP+ V ING
Sbjct:   37 VDSLNTATIPANVEVVVAPPALHVASVASRLRKDVGVSGQDVWHLGAGAYTGEVSAELLKDAGADYSIVGHSERRQKGESNDEVARKAAYALSKGLSVIACIGETKTQREANQTLQVVTEQLAAYAAHV-KDWSKIVVAYEPVWAIGTGLTASPGQAQEVHAAIRKWLKTNVSAAAADSTRIIYGGSVTASNASELSGQTDIDGFLVGGASLKPDFLHIINAQGGGTTNAGGPVNVAING 275          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: A0A0A6YYW1_DICDH (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Dictyota dichotoma TaxID=2876 RepID=A0A0A6YYW1_DICDH)

HSP 1 Score: 231 bits (589), Expect = 1.040e-68
Identity = 123/238 (51.68%), Postives = 155/238 (65.13%), Query Frame = 1
Query:   13 VSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING 726
            V +LN   + +  EVVVAPPSV++  V   +R D  V  QD    G GA TGE +A M + +G ++ I+GHSERR KGE D +C  KA    E+G+  I C+GET EERE G T++VV RQ+ AY   V K+W  FVVAYEPVWAIGTG  A+P Q QEVH  +R W   NV    AD VR+IYGGSV    +  L    D+DGFLVGGASL+P+F +I+NA+ G  + GP+ VGING
Sbjct:   51 VGVLNGSHLTSKTEVVVAPPSVYLQGVSSNMRGDVKVAAQDCWLKGNGAFTGETSADMLKDMGIEWCIIGHSERRQKGEMDEECGAKAGYAIEKGISVIGCIGETKEERESGATMDVVKRQMAAYTATV-KDWDKFVVAYEPVWAIGTGLTASPEQAQEVHLELRKWIAENVSAAVADKVRIIYGGSVNAGTAPTLGEKADIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVTVGING 287          
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Match: A7XK09_PHYVE (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=2 Tax=Phytopythium vexans TaxID=907947 RepID=A7XK09_PHYVE)

HSP 1 Score: 227 bits (579), Expect = 7.620e-68
Identity = 127/239 (53.14%), Postives = 159/239 (66.53%), Query Frame = 1
Query:   13 VSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADGFGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGMQGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAIGTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAELARLDDVDGFLVGGASLEPQFQDIINARGGK-ATSGPIRVGING 726
            V MLN+ ++ A VEVVVAP ++    V+R LR D  V  QDV + G GA TGE +A M +  GA++ +VGHSERR KGE++   A KA    ++G+  I C+GET E+RE  +TL VV  QL+AY   V K+W   V+AYEPVWAIGTG  ATP Q QEVH  IR W +  V Q AAD+ RVIYGGSV   NSAEL++  D+DGFLVGGASL+P F  IINA+      +G + V ING
Sbjct:    4 VGMLNTAKIPANVEVVVAPSAIHAAEVKRSLRADVRVSGQDVWSQGNGAFTGETSAEMLKDAGAEYTLVGHSERRQKGESNEVVAKKAAYALDKGLGVIACIGETKEQRESKQTLAVVTEQLDAYAKHV-KDWSRVVIAYEPVWAIGTGLTATPEQAQEVHASIRNWLKTKVSQSAADSTRVIYGGSVTAANSAELSQKADIDGFLVGGASLKPDFLKIINAQNPTDKVTGAVNVAING 241          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79599.18684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2RBC4_9STRA4.830e-8054.01Triosephosphate isomerase (Fragment) n=1 Tax=Rhizo... [more]
L7QGY5_9STRA4.880e-8057.02Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
A0A5A8C6L9_CAFRO2.060e-7758.37Gp_dh_N domain-containing protein n=4 Tax=Sar TaxI... [more]
A0A0A6YYW3_SACLA2.690e-7653.36Mitochondrial triosephosphate isomerase/glyceralde... [more]
D7FP79_ECTSI1.590e-7352.52Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
D8LXP8_BLAHO4.990e-7152.07Glyceraldehyde 3-phosphate dehydrogenase n=5 Tax=B... [more]
A0A835ZGW0_9STRA6.360e-7050.83Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
A0A418B8D3_9STRA1.090e-6954.17Gp_dh_N domain-containing protein n=6 Tax=Aphanomy... [more]
A0A0A6YYW1_DICDH1.040e-6851.68Mitochondrial triosephosphate isomerase/glyceralde... [more]
A7XK09_PHYVE7.620e-6853.14Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79599contigM-pyrifera_M_contig79599:3..728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.7
Seed ortholog evalue2.2e-62
Seed eggNOG ortholog2880.D7FP79
KEGG rclassRC00149,RC00423
KEGG koko:K00134,ko:K01803
KEGG ReactionR01015,R01061
KEGG Pathwayko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
Hectar predicted targeting categoryother localisation
EggNOG free text desc.triosephosphate isomerase
EggNOG OGsCOG0057@1,COG0149@1,KOG0657@2759,KOG1643@2759
Ec32 ortholog descriptionTriosephosphate isomerase,
Ec32 orthologEc-24_000360.1
EC1.2.1.12,5.3.1.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Exons1
Model size726
Cds size726
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816699.6259098-CDS-M-pyrifera_M_contig79599:2..7281622816699.6259098-CDS-M-pyrifera_M_contig79599:2..728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79599 3..728 -
1692278127.0422444-CDS-M-pyrifera_M_contig79599:2..7281692278127.0422444-CDS-M-pyrifera_M_contig79599:2..728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79599 3..728 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79599.18684.1prot_M-pyrifera_M_contig79599.18684.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79599 3..728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79599.18684.1

>prot_M-pyrifera_M_contig79599.18684.1 ID=prot_M-pyrifera_M_contig79599.18684.1|Name=mRNA_M-pyrifera_M_contig79599.18684.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
MQGWVSMLNSFRVDAGVEVVVAPPSVWVDRVRRGLRDDFGVGVQDVCADG
FGAHTGEVAAAMGRHVGADFAIVGHSERRAKGETDADCAVKAQRVQEEGM
QGILCVGETLEEREGGRTLEVVMRQLEAYNGGVGKEWGDFVVAYEPVWAI
GTGKVATPTQVQEVHQGIRGWFQANVGQDAADAVRVIYGGSVKGENSAEL
ARLDDVDGFLVGGASLEPQFQDIINARGGKATSGPIRVGING
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mRNA from alignment at M-pyrifera_M_contig79599:3..728-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79599.18684.1 ID=mRNA_M-pyrifera_M_contig79599.18684.1|Name=mRNA_M-pyrifera_M_contig79599.18684.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig79599:3..728- (Macrocystis pyrifera P11B4 male)
ATGCAGGGTTGGGTTTCGATGTTGAATTCTTTCCGTGTGGACGCTGGGGT GGAGGTCGTGGTCGCTCCTCCTTCTGTGTGGGTGGATCGCGTTCGCCGTG GTCTCCGTGATGATTTCGGGGTTGGAGTGCAGGATGTGTGTGCGGATGGG TTTGGTGCTCACACTGGTGAGGTTGCTGCGGCAATGGGTCGTCACGTGGG TGCAGATTTTGCGATCGTGGGTCACAGTGAGCGCAGAGCCAAAGGGGAGA CGGATGCAGATTGTGCGGTGAAGGCGCAGAGAGTGCAAGAGGAAGGAATG CAAGGCATCTTGTGTGTGGGTGAGACGTTGGAGGAACGGGAAGGTGGGAG GACGCTGGAAGTGGTGATGCGACAACTGGAAGCCTACAATGGAGGCGTTG GGAAGGAGTGGGGAGATTTTGTCGTCGCCTATGAGCCTGTGTGGGCTATT GGAACGGGAAAAGTGGCCACTCCAACCCAAGTGCAAGAAGTCCACCAAGG CATTCGAGGATGGTTCCAAGCCAATGTGGGTCAAGACGCAGCTGATGCCG TGCGTGTGATTTACGGAGGCAGTGTGAAGGGGGAAAATAGTGCAGAATTG GCACGGCTGGATGATGTGGACGGGTTTTTGGTGGGTGGAGCAAGTCTCGA ACCTCAGTTCCAGGACATTATCAACGCCAGAGGAGGAAAGGCGACGAGTG GTCCAATTCGAGTGGGGATCAATGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79599:3..728-

>mRNA_M-pyrifera_M_contig79599.18684.1 ID=mRNA_M-pyrifera_M_contig79599.18684.1|Name=mRNA_M-pyrifera_M_contig79599.18684.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig79599:3..728- (Macrocystis pyrifera P11B4 male)
ATGCAGGGTTGGGTTTCGATGTTGAATTCTTTCCGTGTGGACGCTGGGGT
GGAGGTCGTGGTCGCTCCTCCTTCTGTGTGGGTGGATCGCGTTCGCCGTG
GTCTCCGTGATGATTTCGGGGTTGGAGTGCAGGATGTGTGTGCGGATGGG
TTTGGTGCTCACACTGGTGAGGTTGCTGCGGCAATGGGTCGTCACGTGGG
TGCAGATTTTGCGATCGTGGGTCACAGTGAGCGCAGAGCCAAAGGGGAGA
CGGATGCAGATTGTGCGGTGAAGGCGCAGAGAGTGCAAGAGGAAGGAATG
CAAGGCATCTTGTGTGTGGGTGAGACGTTGGAGGAACGGGAAGGTGGGAG
GACGCTGGAAGTGGTGATGCGACAACTGGAAGCCTACAATGGAGGCGTTG
GGAAGGAGTGGGGAGATTTTGTCGTCGCCTATGAGCCTGTGTGGGCTATT
GGAACGGGAAAAGTGGCCACTCCAACCCAAGTGCAAGAAGTCCACCAAGG
CATTCGAGGATGGTTCCAAGCCAATGTGGGTCAAGACGCAGCTGATGCCG
TGCGTGTGATTTACGGAGGCAGTGTGAAGGGGGAAAATAGTGCAGAATTG
GCACGGCTGGATGATGTGGACGGGTTTTTGGTGGGTGGAGCAAGTCTCGA
ACCTCAGTTCCAGGACATTATCAACGCCAGAGGAGGAAAGGCGACGAGTG
GTCCAATTCGAGTGGGGATCAATGGGATGCAGGGTTGGGTTTCGATGTTG
AATTCTTTCCGTGTGGACGCTGGGGTGGAGGTCGTGGTCGCTCCTCCTTC
TGTGTGGGTGGATCGCGTTCGCCGTGGTCTCCGTGATGATTTCGGGGTTG
GAGTGCAGGATGTGTGTGCGGATGGGTTTGGTGCTCACACTGGTGAGGTT
GCTGCGGCAATGGGTCGTCACGTGGGTGCAGATTTTGCGATCGTGGGTCA
CAGTGAGCGCAGAGCCAAAGGGGAGACGGATGCAGATTGTGCGGTGAAGG
CGCAGAGAGTGCAAGAGGAAGGAATGCAAGGCATCTTGTGTGTGGGTGAG
ACGTTGGAGGAACGGGAAGGTGGGAGGACGCTGGAAGTGGTGATGCGACA
ACTGGAAGCCTACAATGGAGGCGTTGGGAAGGAGTGGGGAGATTTTGTCG
TCGCCTATGAGCCTGTGTGGGCTATTGGAACGGGAAAAGTGGCCACTCCA
ACCCAAGTGCAAGAAGTCCACCAAGGCATTCGAGGATGGTTCCAAGCCAA
TGTGGGTCAAGACGCAGCTGATGCCGTGCGTGTGATTTACGGAGGCAGTG
TGAAGGGGGAAAATAGTGCAGAATTGGCACGGCTGGATGATGTGGACGGG
TTTTTGGTGGGTGGAGCAAGTCTCGAACCTCAGTTCCAGGACATTATCAA
CGCCAGAGGAGGAAAGGCGACGAGTGGTCCAATTCGAGTGGGGATCAATG
GG
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