mRNA_M-pyrifera_M_contig79505.18668.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: G5E3W1_9PIPI (Putative ornithine carbamoyltransferase (Fragment) n=1 Tax=Pipa carvalhoi TaxID=191480 RepID=G5E3W1_9PIPI) HSP 1 Score: 167 bits (424), Expect = 5.950e-49 Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G NL IATP+GYEP++ V+ A + G + TN+P EA GA+V+VTDTWVSMGQEE+K++RL+DF GYQ+T+ A+P W+ LHCLPRKPEEV DEVFY P+ +V EAENR WT+MAV ++LL
Sbjct: 145 HSIMMSAAKFGMNLRIATPRGYEPNSSVIMKAKQFSKEFGTKLFMTNDPLEAASGANVLVTDTWVSMGQEEEKKKRLKDFEGYQITKQTGKIASPNWIFLHCLPRKPEEVDDEVFYSPKS-LVFQEAENRKWTIMAVMVSLL 285
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: A0A1S2ZR68_ERIEU (Ornithine transcarbamylase, mitochondrial n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S2ZR68_ERIEU) HSP 1 Score: 169 bits (428), Expect = 8.110e-49 Identity = 80/142 (56.34%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G +L ATP+GYEPD V KLA + G ++ T+NP EA RG +V++TDTW+SMGQEE+K++RL+DF GYQ+T A P W LHCLPRKPEEV DEVFY PR +V EAENR WT+MAV ++LL
Sbjct: 202 HSIMMSAAKFGMHLQAATPKGYEPDPSVAKLAEQYAKENGTSLLLTHNPLEAARGGNVLITDTWISMGQEEEKKKRLQDFQGYQITMKTAKAAAPDWTFLHCLPRKPEEVDDEVFYSPRS-LVFPEAENRKWTIMAVMVSLL 342
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: A0A3M1UZJ5_9EURY (Ornithine carbamoyltransferase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A3M1UZJ5_9EURY) HSP 1 Score: 167 bits (424), Expect = 1.180e-48 Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS + SA+++G NL IATP+GY PD +V ++A + G + T++PKEAV+GA+++VTDTW+SMGQ+ + +QRL+ F GYQVT L EA WV +HCLPRKP EV DEVFY R IV DEAENRM+TVMAV LALL
Sbjct: 171 HSFMTSAAKMGMNLRIATPEGYRPDPKVTEIAKKDAETYGTELFITSDPKEAVKGANIIVTDTWISMGQDAEAEQRLKAFEGYQVTMDLAKEAADNWVFMHCLPRKPHEVDDEVFYSDRS-IVFDEAENRMYTVMAVALALL 311
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: A0A6I8PCR4_ORNAN (Ornithine transcarbamylase, mitochondrial n=2 Tax=Monotremata TaxID=9255 RepID=A0A6I8PCR4_ORNAN) HSP 1 Score: 167 bits (423), Expect = 4.540e-48 Identity = 78/142 (54.93%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G +L +ATP+GYEPD ++ K+A + G ++ + +P EA RG++V++TDTWVSMGQEE+K++RLRDF GYQ+T A P W LHCLPRKPEEV DEVFY PR +V EAENR WT+MAV ++LL
Sbjct: 202 HSIMMSAAKFGMHLQVATPKGYEPDPDITKVAEQYAKENGTKMSMSYDPLEAARGSNVLITDTWVSMGQEEEKKKRLRDFQGYQITMKTGKAAAPNWTFLHCLPRKPEEVDDEVFYSPRS-LVFPEAENRKWTIMAVMVSLL 342
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: F6UHY3_MONDO (Ornithine transcarbamylase, mitochondrial n=9 Tax=Metatheria TaxID=9263 RepID=F6UHY3_MONDO) HSP 1 Score: 166 bits (420), Expect = 1.270e-47 Identity = 77/142 (54.23%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G NL +ATP+GYEPD + KLA + G ++ T++P EA +G++V++TDTW+SMGQEE+K +RL+DF GYQ+T A P W LHCLPRKPEEV DEVFY P+ +V EAENR WT+MAV ++LL
Sbjct: 202 HSIMMSAAKFGMNLQVATPKGYEPDPGITKLAEKYAKEHGTKLSLTSDPMEAAQGSNVLITDTWISMGQEEEKNKRLQDFQGYQITMKTAGVAAPNWTFLHCLPRKPEEVDDEVFYCPKS-LVFPEAENRKWTIMAVMVSLL 342
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: A0A452DUP5_CAPHI (Ornithine transcarbamylase, mitochondrial n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A452DUP5_CAPHI) HSP 1 Score: 164 bits (414), Expect = 1.410e-47 Identity = 77/142 (54.23%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G +L +ATP+GYEPD + +LA + G ++ TN+P EA G +V++TDTW+SMGQEE+K++RL+ F GYQVT A P W LHCLPRKPEEV DEVFY PR +V EAENR WT+MAV ++LL
Sbjct: 125 HSIMMSAAKFGMHLQVATPKGYEPDPSITRLAEQYAKENGTKLSLTNDPLEAACGGNVLITDTWISMGQEEEKKKRLQAFQGYQVTMKTAKVAAPDWTFLHCLPRKPEEVDDEVFYSPRS-LVFPEAENRKWTIMAVMVSLL 265
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: A0A8C5P169_JACJA (Ornithine transcarbamylase, mitochondrial n=1 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5P169_JACJA) HSP 1 Score: 164 bits (415), Expect = 1.800e-47 Identity = 77/142 (54.23%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G ++ ATP+GYEPD V+KLA + ++ TN+P EA G +V++TDTW+SMGQEE+K++RL+ F GYQVT + A P W LHCLPRKPEEV DEVFY PR +V EAENR WT+MAV ++LL
Sbjct: 147 HSIMMSAAKFGMHIQAATPKGYEPDPSVIKLAEQYAKENSTRLSLTNDPLEAAHGGNVLITDTWISMGQEEEKKKRLQAFHGYQVTMKIAKAAAPDWTFLHCLPRKPEEVDDEVFYSPRS-LVFPEAENRKWTIMAVMVSLL 287
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: A0A6P8R9V5_GEOSA (ornithine carbamoyltransferase, mitochondrial isoform X1 n=3 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8R9V5_GEOSA) HSP 1 Score: 165 bits (418), Expect = 2.360e-47 Identity = 79/142 (55.63%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G NL IATP+GYEPD V K A + + TN+P EA RG++V+VTDTW+SMGQEE+K++RL+ F GYQ+T A+P W+ LHCLPRKPEEV DEVFY PR +V EAENR WT+MAV ++L+
Sbjct: 199 HSIMLSAAKFGMNLRIATPKGYEPDPSVTKAAEQFSKEYNTQLIMTNDPLEAARGSNVLVTDTWISMGQEEEKKKRLQAFQGYQITNQTGKVASPNWIFLHCLPRKPEEVDDEVFYSPRS-LVFQEAENRKWTIMAVFVSLM 339
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: A0A0D2VVJ9_CAPO3 (Ornithine carbamoyltransferase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VVJ9_CAPO3) HSP 1 Score: 164 bits (414), Expect = 3.220e-47 Identity = 80/142 (56.34%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HSL+ +A ++ ++++ATP GY P+A ++K A + G + TNNP+EAV+GA+V+VTDTW+SMG E K++RLR FAG+QVT L A+P W LHCLPRKPEEV+DEVF PR +V DEAENRM+TVMAV L LL
Sbjct: 165 HSLLETAPKMQMHISVATPPGYLPNATIVKEAQADAARYGTRVELTNNPREAVKGANVIVTDTWISMGDEAQKEERLRSFAGFQVTNELLKHASPDWKFLHCLPRKPEEVSDEVFRSPRS-LVWDEAENRMYTVMAVILDLL 305
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Match: OTC_SHEEP (Ornithine transcarbamylase, mitochondrial n=21 Tax=Eutheria TaxID=9347 RepID=OTC_SHEEP) HSP 1 Score: 165 bits (417), Expect = 3.660e-47 Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 1 HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKEAVRGADVVVTDTWVSMGQEEDKQQRLRDFAGYQVTETLCAEANPGWVLLHCLPRKPEEVADEVFYGPRGRIVLDEAENRMWTVMAVTLALL 426
HS++ SA++ G +L +ATP+GYEPD + KLA + G ++ TN+P EA G +V++TDTW+SMGQEE+K++RL+ F GYQVT A P W LHCLPRKPEEV DEVFY PR +V EAENR WT+MAV ++LL
Sbjct: 203 HSIMMSAAKFGMHLQVATPKGYEPDPSITKLAEQYAKENGTKLSLTNDPLEAACGGNVLITDTWISMGQEEEKKKRLQAFQGYQVTMKTAKVAAPDWTFLHCLPRKPEEVDDEVFYSPRS-LVFPEAENRKWTIMAVMVSLL 343 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79505.18668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79505.18668.1 >prot_M-pyrifera_M_contig79505.18668.1 ID=prot_M-pyrifera_M_contig79505.18668.1|Name=mRNA_M-pyrifera_M_contig79505.18668.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp HSLVASASRIGFNLNIATPQGYEPDAEVLKLAFDNIGDTGITINTTNNPKback to top mRNA from alignment at M-pyrifera_M_contig79505:521..964- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79505.18668.1 ID=mRNA_M-pyrifera_M_contig79505.18668.1|Name=mRNA_M-pyrifera_M_contig79505.18668.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig79505:521..964- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79505:521..964- >mRNA_M-pyrifera_M_contig79505.18668.1 ID=mRNA_M-pyrifera_M_contig79505.18668.1|Name=mRNA_M-pyrifera_M_contig79505.18668.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig79505:521..964- (Macrocystis pyrifera P11B4 male)back to top |