mRNA_M-pyrifera_M_contig79500.18663.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79500.18663.1
Unique NamemRNA_M-pyrifera_M_contig79500.18663.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A2E5X270_9BACT (FAD-binding FR-type domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X270_9BACT)

HSP 1 Score: 276 bits (706), Expect = 3.880e-90
Identity = 140/235 (59.57%), Postives = 160/235 (68.09%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDGDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPPYLLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLRREDG SPAIPRPFS+YR  DG L FMI+ +GPGT A     PG  LRL GP G GWP+F+ G EPWVFLAGGIGSAPF MA+ES +          P P+LLYGAA+A  LY++  F      +  ATDDGS GF+GNVLELL   QE   IP+ +RLAACGP PMLRA AA A      CW+SLE  MGCGVGICNGC V T+P G+ G WP+ K CV+GP F  A V L
Sbjct:   54 FMLRREDGASPAIPRPFSLYRVADGCLEFMIQTLGPGTVALATCEPGTPLRLTGPSGRGWPEFSRGPEPWVFLAGGIGSAPFLMALESALPGHASASPRAPGPWLLYGAASAERLYELPAFMATGAPVLCATDDGSHGFRGNVLELLASEQEAGRIPRRLRLAACGPEPMLRAAAALAAREELPCWLSLETYMGCGVGICNGCAVPTEPSGSLGAWPSAKCCVDGPVFEAASVVL 288          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A2D6HJR8_9BACT (Dihydroorotate dehydrogenase electron transfer subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJR8_9BACT)

HSP 1 Score: 265 bits (677), Expect = 7.980e-86
Identity = 132/236 (55.93%), Postives = 157/236 (66.53%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDGDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPPY-LLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLRREDGLSPAI RPFS+YR+  G+L F++KV G GTRA     PG  LR+IGPLG GWPD      PWV LAGGIGSAPFF+A+E  +      R +      LLYGA++   LYD+E F  L   +  ATDDGS GF GNV ELL    E   +P+++RL ACGP PMLR+V   A +    CW+SLEE+MGCGVGICNGC V T+ EG  G WPN K CVEGP F T ++ L
Sbjct:   45 FMLRREDGLSPAIGRPFSLYRQTGGELQFLLKVTGRGTRALAAREPGRELRVIGPLGNGWPDLDGDGAPWVMLAGGIGSAPFFLAIEQALAGVGGTRPVAAEDVCLLYGASSEVFLYDLERFESLGVRVLAATDDGSRGFPGNVCELLEHEWEAGSLPREVRLLACGPDPMLRSVERLARERDLACWLSLEELMGCGVGICNGCPVPTRLEGPLGSWPNAKCCVEGPVFSTEEITL 280          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A7Y5PY40_9PLAN (Dihydroorotate dehydrogenase electron transfer subunit n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5PY40_9PLAN)

HSP 1 Score: 261 bits (667), Expect = 2.700e-84
Identity = 128/236 (54.24%), Postives = 156/236 (66.10%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDGDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPPY-LLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLRRED LSPAIPRPFSIYR+    + F++KV+G GT A   + PG  LR +GPLG GWP  + G  PWV L GG+GSAPFFMA+E  +   D     Q      L+GAA+ G LYDV+ F  L   +  AT DGS GFQGNVL+LL  LQ    +P+ +RL ACGP  ML AVA FAD+   +CW+SLE +MGCGVGICNGC + T P G  G W N+K CVEGP F + ++ L
Sbjct:   45 FMLRREDALSPAIPRPFSIYRQNGDTIEFLVKVMGRGTSALAQSTPGTKLRTLGPLGNGWPTLSGGGAPWVMLGGGVGSAPFFMAIEQALAGMDGAPPTQRSDLTFLFGAAHKGFLYDVDAFERLGIRVRTATIDGSHGFQGNVLQLLESLQRSNELPERVRLLACGPERMLEAVARFADERHLDCWLSLETLMGCGVGICNGCPIPTNPSGPRGSWGNVKCCVEGPVFKSTEILL 280          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A2D5WBR5_9BACT (FAD-binding FR-type domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5WBR5_9BACT)

HSP 1 Score: 258 bits (658), Expect = 7.100e-83
Identity = 133/230 (57.83%), Postives = 155/230 (67.39%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDGDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLM--RAADQDRLIQPPPYLLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAF 684
            FM+RR+DG SPAIPRPFS+YR     L FM++ +G GT+A    R    L L GP G GWP+F+ G EPWVFLAGGIGSAPF MA+E  +   AA   R   P P+L+YGAA+A  LY+   FA+    +  ATDDGS GF GNVLELL   QE   IP  +RLAACGP PMLRAVAA A+     CW+SLE  MGCGVGICNGC V T+P GA G WP  K CV+GP F
Sbjct:   54 FMVRRQDGASPAIPRPFSLYRVAGDCLEFMVQSLGAGTQALAACREDTPLLLTGPAGSGWPEFSVGSEPWVFLAGGIGSAPFLMALERALPPHAAASPRA--PGPWLIYGAASAARLYERRAFADTGAPVLCATDDGSHGFHGNVLELLALEQEAGRIPARVRLAACGPQPMLRAVAALAEKEQLPCWLSLETYMGCGVGICNGCAVPTRPGGALGDWPWAKCCVDGPVF 281          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A518BFI6_9BACT (Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BFI6_9BACT)

HSP 1 Score: 252 bits (644), Expect = 9.380e-81
Identity = 130/241 (53.94%), Postives = 155/241 (64.32%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDG-----DLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPP-YLLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLRREDGLSP IPRP+SIYR+        +L F+IKV+G G++A   +RPGE LRLIGPLG GWP       PWV LAGG+GSAPF M ++  +   D  R  +P   + L+GAA  GLLYD+  F      +H AT DGS G +GNVL+LL  LQ    +P ++RL ACGP PML AV   A + G ECW+SLE +MGCGVGICNGC V T P G  G W N K CVEGP F    V L
Sbjct:   45 FMLRREDGLSPLIPRPYSIYRDGPASNGARELEFLIKVMGRGSQALAKSRPGERLRLIGPLGNGWPTLDGDGPPWVLLAGGVGSAPFLMGIQQALAGMDDARACRPDQLWYLFGAATKGLLYDLGAFEATGVHVHTATVDGSHGRRGNVLDLLEDLQRRGDLPSEVRLLACGPEPMLEAVEHLARERGLECWLSLETLMGCGVGICNGCPVPTVPGGPLGAWTNAKCCVEGPVFSVDAVTL 285          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A2D5XQY1_9BACT (FAD-binding FR-type domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XQY1_9BACT)

HSP 1 Score: 252 bits (643), Expect = 2.420e-80
Identity = 125/237 (52.74%), Postives = 157/237 (66.24%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVD-GDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPP-YLLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLR ++  SPAIPRPFS+YR+ D G L F+IKVIGPGT A   +R GE + +IGPLG GWP+     +P V LAGGIGSA F++A++  +   DQ   + P   +L+YG    GLLYD+E+F EL  A+   TDDGS GF GNV++ L       L+P D+RL  CGP PM+RAV   A+D   +CW SLE  MGCGVGICNGC V+T  EG+ G WP  K CV+GP F   DV+L
Sbjct:   70 FMLRGDEESSPAIPRPFSLYRQGDSGILEFLIKVIGPGTEALAESRVGEEIVMIGPLGHGWPELPQDGKPLVMLAGGIGSASFYIALQQALAGTDQRPAVDPGQLHLIYGGRTKGLLYDIEKFEELGIAVIPCTDDGSSGFHGNVVQALEDHWRQSLLPSDVRLWTCGPEPMMRAVVKVAEDRDLQCWFSLETYMGCGVGICNGCAVLTCKEGSLGSWPVAKCCVDGPVFAARDVQL 306          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A521K948_9BACT (FAD-binding FR-type domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K948_9BACT)

HSP 1 Score: 250 bits (639), Expect = 2.790e-79
Identity = 127/237 (53.59%), Postives = 152/237 (64.14%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDGDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTP-GEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPPY-LLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLRREDG  P +PRPFSIYR+   +L F+IKV+G G+RA    R G+ LR+ GPLG GWP   P   EPWV LAGGIGSAPFFM +E  +   D     +P    LLYGAA  GLLYD++ F +L      ATDDGS G++GNVL LL  LQ+   +P  +RL ACGP  ML AV  FA   G  CW+SLE +MGCGVGICN C V T+ +G    W N K CVEGP F   ++ L
Sbjct:  103 FMLRREDGSMPLVPRPFSIYRQHGAELEFLIKVMGQGSRALAALRAGDRLRVTGPLGNGWPALAPVANEPWVMLAGGIGSAPFFMGIEQALAGMDGKPPCRPADLALLYGAARKGLLYDIDAFRQLGVRTWTATDDGSDGYRGNVLGLLESLQQRGELPPKVRLLACGPERMLEAVERFALARGLACWLSLESLMGCGVGICNACPVPTRADGPLAAWSNAKCCVEGPVFSCTEIAL 339          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A2D5B1C2_9BACT (FAD-binding FR-type domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B1C2_9BACT)

HSP 1 Score: 248 bits (633), Expect = 3.830e-79
Identity = 128/237 (54.01%), Postives = 154/237 (64.98%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDGDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPPYL--LYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FML R DG+SP IPRPFSIYR+   DL F+IK+ G GTRA      G  +RL GPLG GWP       PWVFLAGG+GSAPF++A+E  +   D  R   P  ++  L+GAA A  LYD+E   +L  ++H ATDDGS GF G VL LL +LQ +  I Q IR+ ACGP PMLRAV   A     E ++SLE +MGCGVGICNGC V T+PEG  G+WPN K CVEGP F    + L
Sbjct:   45 FMLGRTDGVSPLIPRPFSIYRQRGRDLDFLIKITGRGTRALAGAASGTEIRLTGPLGNGWPTLEADGAPWVFLAGGVGSAPFYLAIEQALAGMD-GRGPVPRKHISFLFGAAQADHLYDLEALGDLGVSIHTATDDGSSGFHGTVLGLLDRLQGEGTIAQSIRICACGPEPMLRAVEELARARDVEAYLSLETLMGCGVGICNGCPVPTRPEGPLGEWPNAKCCVEGPVFAADAITL 280          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A523PLS0_9BACT (Dihydroorotate dehydrogenase electron transfer subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PLS0_9BACT)

HSP 1 Score: 246 bits (629), Expect = 1.500e-78
Identity = 123/237 (51.90%), Postives = 156/237 (65.82%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREV-DGDLVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPPY-LLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLRR D LSPAIPRPFS+YR + DG L F+IKV+G GTRA   +RPG++L  +GPLG G+        PWV LAGGIGS PF+M +E  +   D    ++     L+YGAA+AG LY++E FA L      ATDDGS GF GNV++ L    + + +P ++RL ACGP  M+ AVAA A +   +CW+SLE +MGCGVGICNGC V T PEG  G WP  K C++GP F  A + L
Sbjct:   45 FMLRRADALSPAIPRPFSVYRHLADGSLEFLIKVMGRGTRALADSRPGDSLVTVGPLGRGFDTLDGDGPPWVMLAGGIGSVPFYMGIEQALAGMDGGAPVRSQDVTLVYGAAHAGFLYELEAFAALGVRTVAATDDGSFGFHGNVVQALVAQWQADRLPAEVRLLACGPERMMAAVAAVARERELDCWLSLETLMGCGVGICNGCAVETVPEGPLGAWPVAKCCIDGPVFSAAAIRL 281          
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Match: A0A518D3U6_9BACT (Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D3U6_9BACT)

HSP 1 Score: 246 bits (629), Expect = 4.610e-78
Identity = 129/245 (52.65%), Postives = 157/245 (64.08%), Query Frame = 1
Query:    1 FMLRREDGLSPAIPRPFSIYREVDGD---------LVFMIKVIGPGTRAFELTRPGETLRLIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQPPP-YLLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQEDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICNGCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL 705
            FMLRREDG +P IPRP+S+YR+  G          + F+IKV+G G+RA E    G  LRLIGPLG GWP       PWV LAGG+GSAPF MA+E  +R  D    +     + L+GA + GLLYD+E F  L   +H AT DGS G QG+VL+LL  LQ    IP+ IR+ ACGP PML AV A A +  ++CW+SLE +MGCGVGICNGC V T+  GA   WPN K CVEGP F   D+EL
Sbjct:   72 FMLRREDGTAPLIPRPYSVYRQGGGASSSTGEAPWVEFLIKVMGRGSRALEAAPIGSQLRLIGPLGNGWPVLDGDGAPWVMLAGGVGSAPFPMAIEQALRGMDGGAAVASRDLHFLFGARDRGLLYDLELFERLGVNVHTATVDGSHGMQGHVLQLLDALQAAGSIPKQIRVLACGPDPMLEAVHARAIEEEWDCWLSLETLMGCGVGICNGCPVPTREGGALAGWPNAKCCVEGPVFAARDIEL 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79500.18663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5X270_9BACT3.880e-9059.57FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A2D6HJR8_9BACT7.980e-8655.93Dihydroorotate dehydrogenase electron transfer sub... [more]
A0A7Y5PY40_9PLAN2.700e-8454.24Dihydroorotate dehydrogenase electron transfer sub... [more]
A0A2D5WBR5_9BACT7.100e-8357.83FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A518BFI6_9BACT9.380e-8153.94Dihydroorotate dehydrogenase B (NAD(+)), electron ... [more]
A0A2D5XQY1_9BACT2.420e-8052.74FAD-binding FR-type domain-containing protein n=2 ... [more]
A0A521K948_9BACT2.790e-7953.59FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A2D5B1C2_9BACT3.830e-7954.01FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A523PLS0_9BACT1.500e-7851.90Dihydroorotate dehydrogenase electron transfer sub... [more]
A0A518D3U6_9BACT4.610e-7852.65Dihydroorotate dehydrogenase B (NAD(+)), electron ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79500contigM-pyrifera_M_contig79500:257..964 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score145.6
Seed ortholog evalue2.9e-32
Seed eggNOG ortholog1410650.JHWL01000003_gene3049
Preferred namepyrK
KEGG koko:K02823
KEGG Pathwayko00240,ko01100,map00240,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(
EggNOG OGs1TQ5D@1239,24AY2@186801,4BX4V@830,COG0543@1,COG0543@2
COG Functional cat.CH
Best tax levelButyrivibrio
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size708
Cds size705
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816698.5379727-CDS-M-pyrifera_M_contig79500:256..9611622816698.5379727-CDS-M-pyrifera_M_contig79500:256..961Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79500 257..961 -
1692278126.3942156-CDS-M-pyrifera_M_contig79500:256..9611692278126.3942156-CDS-M-pyrifera_M_contig79500:256..961Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79500 257..961 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816698.5497384-UTR-M-pyrifera_M_contig79500:961..9641622816698.5497384-UTR-M-pyrifera_M_contig79500:961..964Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79500 962..964 -
1692278126.405328-UTR-M-pyrifera_M_contig79500:961..9641692278126.405328-UTR-M-pyrifera_M_contig79500:961..964Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79500 962..964 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79500.18663.1prot_M-pyrifera_M_contig79500.18663.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79500 257..961 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79500.18663.1

>prot_M-pyrifera_M_contig79500.18663.1 ID=prot_M-pyrifera_M_contig79500.18663.1|Name=mRNA_M-pyrifera_M_contig79500.18663.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp
MLRREDGLSPAIPRPFSIYREVDGDLVFMIKVIGPGTRAFELTRPGETLR
LIGPLGLGWPDFTPGEEPWVFLAGGIGSAPFFMAVESLMRAADQDRLIQP
PPYLLYGAANAGLLYDVEEFAELDCALHVATDDGSLGFQGNVLELLTQLQ
EDELIPQDIRLAACGPLPMLRAVAAFADDHGYECWVSLEEMMGCGVGICN
GCVVMTKPEGAHGKWPNLKACVEGPAFCTADVEL*
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mRNA from alignment at M-pyrifera_M_contig79500:257..964-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79500.18663.1 ID=mRNA_M-pyrifera_M_contig79500.18663.1|Name=mRNA_M-pyrifera_M_contig79500.18663.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig79500:257..964- (Macrocystis pyrifera P11B4 male)
TTCATGCTGCGCCGCGAGGACGGCCTCTCGCCGGCGATCCCGCGCCCGTT CTCGATCTACCGCGAGGTGGACGGCGACCTGGTCTTCATGATCAAGGTGA TCGGCCCCGGCACGCGCGCCTTCGAGCTCACGCGACCCGGCGAGACGCTG CGCCTGATCGGGCCGCTGGGCCTGGGCTGGCCGGACTTCACGCCGGGTGA GGAGCCGTGGGTCTTCCTGGCCGGCGGCATCGGCTCGGCGCCGTTCTTCA TGGCGGTCGAGTCGCTGATGCGCGCGGCGGACCAGGACCGCCTGATCCAG CCGCCGCCGTACCTCCTGTACGGCGCGGCCAACGCGGGCCTGCTCTACGA CGTCGAGGAGTTCGCCGAGCTCGACTGCGCGCTGCACGTGGCGACCGACG ACGGCTCGCTCGGCTTCCAAGGCAACGTGCTCGAGCTCCTCACGCAACTC CAGGAGGACGAGCTGATCCCCCAGGACATCCGCCTCGCGGCGTGCGGCCC GCTCCCGATGCTACGCGCGGTGGCCGCGTTCGCGGACGACCACGGCTACG AGTGCTGGGTCAGCCTCGAAGAGATGATGGGCTGCGGCGTCGGCATCTGC AACGGCTGCGTCGTCATGACCAAGCCCGAAGGCGCCCACGGCAAGTGGCC GAACCTCAAGGCCTGCGTGGAAGGCCCGGCCTTCTGCACGGCCGACGTCG AGCTGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79500:257..964-

>mRNA_M-pyrifera_M_contig79500.18663.1 ID=mRNA_M-pyrifera_M_contig79500.18663.1|Name=mRNA_M-pyrifera_M_contig79500.18663.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1410bp|location=Sequence derived from alignment at M-pyrifera_M_contig79500:257..964- (Macrocystis pyrifera P11B4 male)
ATGCTGCGCCGCGAGGACGGCCTCTCGCCGGCGATCCCGCGCCCGTTCTC
GATCTACCGCGAGGTGGACGGCGACCTGGTCTTCATGATCAAGGTGATCG
GCCCCGGCACGCGCGCCTTCGAGCTCACGCGACCCGGCGAGACGCTGCGC
CTGATCGGGCCGCTGGGCCTGGGCTGGCCGGACTTCACGCCGGGTGAGGA
GCCGTGGGTCTTCCTGGCCGGCGGCATCGGCTCGGCGCCGTTCTTCATGG
CGGTCGAGTCGCTGATGCGCGCGGCGGACCAGGACCGCCTGATCCAGCCG
CCGCCGTACCTCCTGTACGGCGCGGCCAACGCGGGCCTGCTCTACGACGT
CGAGGAGTTCGCCGAGCTCGACTGCGCGCTGCACGTGGCGACCGACGACG
GCTCGCTCGGCTTCCAAGGCAACGTGCTCGAGCTCCTCACGCAACTCCAG
GAGGACGAGCTGATCCCCCAGGACATCCGCCTCGCGGCGTGCGGCCCGCT
CCCGATGCTACGCGCGGTGGCCGCGTTCGCGGACGACCACGGCTACGAGT
GCTGGGTCAGCCTCGAAGAGATGATGGGCTGCGGCGTCGGCATCTGCAAC
GGCTGCGTCGTCATGACCAAGCCCGAAGGCGCCCACGGCAAGTGGCCGAA
CCTCAAGGCCTGCGTGGAAGGCCCGGCCTTCTGCACGGCCGACGTCGAGC
TGTAGATGCTGCGCCGCGAGGACGGCCTCTCGCCGGCGATCCCGCGCCCG
TTCTCGATCTACCGCGAGGTGGACGGCGACCTGGTCTTCATGATCAAGGT
GATCGGCCCCGGCACGCGCGCCTTCGAGCTCACGCGACCCGGCGAGACGC
TGCGCCTGATCGGGCCGCTGGGCCTGGGCTGGCCGGACTTCACGCCGGGT
GAGGAGCCGTGGGTCTTCCTGGCCGGCGGCATCGGCTCGGCGCCGTTCTT
CATGGCGGTCGAGTCGCTGATGCGCGCGGCGGACCAGGACCGCCTGATCC
AGCCGCCGCCGTACCTCCTGTACGGCGCGGCCAACGCGGGCCTGCTCTAC
GACGTCGAGGAGTTCGCCGAGCTCGACTGCGCGCTGCACGTGGCGACCGA
CGACGGCTCGCTCGGCTTCCAAGGCAACGTGCTCGAGCTCCTCACGCAAC
TCCAGGAGGACGAGCTGATCCCCCAGGACATCCGCCTCGCGGCGTGCGGC
CCGCTCCCGATGCTACGCGCGGTGGCCGCGTTCGCGGACGACCACGGCTA
CGAGTGCTGGGTCAGCCTCGAAGAGATGATGGGCTGCGGCGTCGGCATCT
GCAACGGCTGCGTCGTCATGACCAAGCCCGAAGGCGCCCACGGCAAGTGG
CCGAACCTCAAGGCCTGCGTGGAAGGCCCGGCCTTCTGCACGGCCGACGT
CGAGCTGTAG
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