prot_M-pyrifera_M_contig79381.18640.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79381.18640.1
Unique Nameprot_M-pyrifera_M_contig79381.18640.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length160
Homology
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A3D5DJC9_9GAMM (SsrA-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DJC9_9GAMM)

HSP 1 Score: 248 bits (634), Expect = 2.330e-82
Identity = 127/159 (79.87%), Postives = 137/159 (86.16%), Query Frame = 0
Query:    1 MANKKKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKSG 159
            MANKKKS K PSATIA NKKAR+DY IE+RIEAG+ L+GWEVKSLRAGK QI D YVLLKDGEAFLLG  I+PM++ SSH   DP RTRKLLLH++EI RLIGAVERKGFT+V TALYWK GRAK ELGLAKGKKQHDKRATEKARDW REK RILK G
Sbjct:    1 MANKKKSKKVPSATIATNKKARYDYFIEERIEAGVALQGWEVKSLRAGKAQIGDGYVLLKDGEAFLLGGLISPMVSTSSHTEIDPRRTRKLLLHKKEITRLIGAVERKGFTIVATALYWKRGRAKVELGLAKGKKQHDKRATEKARDWDREKGRILKGG 159          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A1Z4VR12_9GAMM (SsrA-binding protein n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z4VR12_9GAMM)

HSP 1 Score: 223 bits (569), Expect = 2.260e-72
Identity = 112/158 (70.89%), Postives = 133/158 (84.18%), Query Frame = 0
Query:    4 KKKSTKTPS--ATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKSG 159
            K KS KT S  +TIALNKKAR DYHIE+R EAG+ LEGWEVKSLRAGKVQ+ ++YV++KDGEAFL G  ITP+L AS+HI+ DPTRTRKLLLH++E+ +LIGAVERKG+ ++  A+YWK GRAK E+GLAKGKK HDKRA  K RDW REKQRI+KSG
Sbjct:    6 KSKSNKTGSGGSTIALNKKARHDYHIEERFEAGLALEGWEVKSLRAGKVQLTESYVIVKDGEAFLFGCLITPLLTASTHIHPDPTRTRKLLLHREELDKLIGAVERKGYALIPLAMYWKRGRAKLEIGLAKGKKAHDKRAAIKERDWAREKQRIMKSG 163          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A5Q4EVA8_9GAMM (SsrA-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A5Q4EVA8_9GAMM)

HSP 1 Score: 223 bits (567), Expect = 3.740e-72
Identity = 114/159 (71.70%), Postives = 137/159 (86.16%), Query Frame = 0
Query:    1 MANKKKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKSG 159
            MA K+K T + + TIALN+KARFD+ IE+ +EAG+VLEGWEVKSLR GK QI +AYV+L+ GEAFLLG  ITP+L+AS+H++ DPTRTRKLLL +QEI RLIGAVERKG+T+V  ALYW+ GRAK ++GLAKGKKQHDKRATEKARDW REK R+LKSG
Sbjct:    1 MAGKRKKTGSDN-TIALNRKARFDFFIEENLEAGLVLEGWEVKSLREGKAQISEAYVVLRGGEAFLLGALITPLLSASTHVHPDPTRTRKLLLGRQEIDRLIGAVERKGYTLVPLALYWQRGRAKLDIGLAKGKKQHDKRATEKARDWQREKARLLKSG 158          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A318VT50_9GAMM (SsrA-binding protein n=6 Tax=Thioalkalivibrio TaxID=106633 RepID=A0A318VT50_9GAMM)

HSP 1 Score: 221 bits (562), Expect = 2.160e-71
Identity = 108/159 (67.92%), Postives = 132/159 (83.02%), Query Frame = 0
Query:    1 MANKKKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKSG 159
            M  KKK+    S+TIALN++AR DYHIEDR+EAG+ LEGWEVKSLRAG+ QI +AYVLL++GEA+L G H TP+  AS+HIN DP+RTRKLLLH+ EI RLIGAVER+GFT+V  ALYWK GRAK E+GLAKGKK +DKRA +K +DW RE+ RI+K+G
Sbjct:    1 MGKKKKTAGDGSSTIALNRRARHDYHIEDRLEAGLALEGWEVKSLRAGRAQISEAYVLLRNGEAYLFGAHFTPLPTASTHINPDPSRTRKLLLHRSEINRLIGAVERRGFTLVPLALYWKRGRAKVEIGLAKGKKSYDKRADKKEKDWQRERARIMKNG 159          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A7C1YYN2_9GAMM (SsrA-binding protein n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1YYN2_9GAMM)

HSP 1 Score: 218 bits (556), Expect = 1.830e-70
Identity = 110/160 (68.75%), Postives = 133/160 (83.12%), Query Frame = 0
Query:    1 MANK-KKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKSG 159
            MA K KK   +  +TIALNKKAR DY IE+R EAGI LEGWEVKSLR G+VQ+ ++YV++KD EAFLLG HI+P+  AS+HI+ +PTRTRKLL+H++E+ +LIG VERKGFT+V TA+YWK GRAK E+GLAKGKKQHDKR TEK RDW R+KQRILK G
Sbjct:    1 MAKKSKKQGGSGDSTIALNKKARHDYFIEERYEAGIALEGWEVKSLREGRVQLKESYVVIKDAEAFLLGAHISPLATASTHIHPNPTRTRKLLMHRRELNKLIGLVERKGFTLVPTAMYWKRGRAKLEIGLAKGKKQHDKRTTEKERDWKRDKQRILKHG 160          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A1R3VSX6_9GAMM (SsrA-binding protein n=1 Tax=Ectothiorhodosinus mongolicus TaxID=233100 RepID=A0A1R3VSX6_9GAMM)

HSP 1 Score: 218 bits (554), Expect = 3.450e-70
Identity = 106/156 (67.95%), Postives = 130/156 (83.33%), Query Frame = 0
Query:    3 NKKKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKS 158
            +KK S    S+TIALNKKAR +Y IEDR EAG+VLEGWEVKSLRAG+VQ+ ++YVL+++ EAFL G HI+P+  AS+HI+ DP RTRKLLLH  E+A+LIG VER+G+T+V  A+YWK GRAK E+GLAKGKK HDKRATEK RDW REK+R+LKS
Sbjct:    2 SKKSSKSASSSTIALNKKARHEYFIEDRFEAGLVLEGWEVKSLRAGRVQLTESYVLIRNAEAFLFGAHISPLPTASTHIHPDPVRTRKLLLHSAELAKLIGQVERRGYTLVPLAMYWKRGRAKLEIGLAKGKKAHDKRATEKERDWQREKERVLKS 157          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A0G3G5F4_9GAMM (SsrA-binding protein n=11 Tax=Thioalkalivibrio TaxID=106633 RepID=A0A0G3G5F4_9GAMM)

HSP 1 Score: 218 bits (554), Expect = 3.560e-70
Identity = 106/159 (66.67%), Postives = 132/159 (83.02%), Query Frame = 0
Query:    1 MANKKKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKSG 159
            M   KK  K PS+TIALN+KAR ++ IEDR+EAG+ LEGWEVKS+RAG+ Q+ +AYVLL++GEAFL G HITP+  AS+HIN DP+RTRKLLLH+ EI RL+GAVERKG+T+V  ALYWK GRAK E+GLAKGKK++DKRA +K +DW RE+ RI+K G
Sbjct:    1 MGKNKKQAKEPSSTIALNRKARHEFFIEDRLEAGMELEGWEVKSMRAGRAQLSEAYVLLRNGEAFLFGAHITPLPTASTHINPDPSRTRKLLLHRAEINRLVGAVERKGYTLVPMALYWKRGRAKLEIGLAKGKKEYDKRADKKDKDWERERARIMKHG 159          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A7K4E5E2_9EURY (SsrA-binding protein SmpB n=1 Tax=Halobacteria archaeon TaxID=2670410 RepID=A0A7K4E5E2_9EURY)

HSP 1 Score: 218 bits (554), Expect = 3.680e-70
Identity = 108/158 (68.35%), Postives = 135/158 (85.44%), Query Frame = 0
Query:    1 MANKKKS-TKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILK 157
            MA KKK+ +  PS+TIALNKKAR +Y IE+R EAG+ L+GWEVKSLR G+VQ+ ++YVL+K+GEA+LLG HITP++ AS+HI  DPTRTRKLLLH++E+ +LIGAVERKG+T+V  ALYWK GRAK E+ LA+GK+ HDKRATEKARDW REK RIL+
Sbjct:    1 MAKKKKTGSNRPSSTIALNKKARHEYFIEERFEAGLALQGWEVKSLREGRVQLAESYVLIKNGEAWLLGSHITPLVTASTHIKPDPTRTRKLLLHRRELDKLIGAVERKGYTLVPLALYWKKGRAKLEIALARGKQSHDKRATEKARDWEREKSRILR 158          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A451BCN1_9GAMM (SsrA-binding protein n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A451BCN1_9GAMM)

HSP 1 Score: 217 bits (553), Expect = 5.060e-70
Identity = 104/154 (67.53%), Postives = 130/154 (84.42%), Query Frame = 0
Query:    5 KKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILKS 158
            K  TK P+ TIALNKK R+DY IE+R+EAGI LEGWEVKSLRAG++Q+ ++YVLLK  E +L G H++P+ +AS+H+N DP RTRKLLLH++EI+RLIG VER+G+T+V TA+YWK GRAK E+G A+GKKQ DKRATEK RDW REKQRILK+
Sbjct:    3 KPKTKRPTNTIALNKKVRYDYFIEERLEAGIALEGWEVKSLRAGRIQLKESYVLLKGNEVWLFGAHLSPLASASTHVNADPLRTRKLLLHRKEISRLIGIVERRGYTLVPTAMYWKQGRAKLEIGTARGKKQFDKRATEKDRDWAREKQRILKT 156          
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Match: A0A7C1TM75_9GAMM (SsrA-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1TM75_9GAMM)

HSP 1 Score: 217 bits (553), Expect = 5.400e-70
Identity = 108/157 (68.79%), Postives = 131/157 (83.44%), Query Frame = 0
Query:    1 MANKKKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKVQIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIARLIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTREKQRILK 157
            M   KK TK   +TIALNKK+R DY + +R EAG+VLEGWEVKSLRAG+VQ+ DAYVLLKDGEA+LLG  ITP+  AS+HI  DPTRTRKLLLH++E+ +LIGAVERKG+T++ TA+YWK GRAK E+ LAKGK+ HDKRATE+ RDW R+KQR+LK
Sbjct:    1 MGKAKKKTKPAGSTIALNKKSRHDYLLGERFEAGLVLEGWEVKSLRAGRVQLRDAYVLLKDGEAWLLGAVITPLPTASTHIQPDPTRTRKLLLHREELNKLIGAVERKGYTLIPTAMYWKKGRAKLEIALAKGKQTHDKRATERERDWQRDKQRLLK 157          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79381.18640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DJC9_9GAMM2.330e-8279.87SsrA-binding protein n=1 Tax=Gammaproteobacteria b... [more]
A0A1Z4VR12_9GAMM2.260e-7270.89SsrA-binding protein n=5 Tax=Gammaproteobacteria T... [more]
A0A5Q4EVA8_9GAMM3.740e-7271.70SsrA-binding protein n=1 Tax=Gammaproteobacteria b... [more]
A0A318VT50_9GAMM2.160e-7167.92SsrA-binding protein n=6 Tax=Thioalkalivibrio TaxI... [more]
A0A7C1YYN2_9GAMM1.830e-7068.75SsrA-binding protein n=1 Tax=Sedimenticola sp. Tax... [more]
A0A1R3VSX6_9GAMM3.450e-7067.95SsrA-binding protein n=1 Tax=Ectothiorhodosinus mo... [more]
A0A0G3G5F4_9GAMM3.560e-7066.67SsrA-binding protein n=11 Tax=Thioalkalivibrio Tax... [more]
A0A7K4E5E2_9EURY3.680e-7068.35SsrA-binding protein SmpB n=1 Tax=Halobacteria arc... [more]
A0A451BCN1_9GAMM5.060e-7067.53SsrA-binding protein n=1 Tax=Candidatus Kentron sp... [more]
A0A7C1TM75_9GAMM5.400e-7068.79SsrA-binding protein n=1 Tax=Gammaproteobacteria b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000037SsrA-binding proteinPFAMPF01668SmpBcoord: 15..157
e-value: 9.7E-59
score: 197.4
IPR000037SsrA-binding proteinTIGRFAMTIGR00086TIGR00086coord: 15..157
e-value: 1.5E-53
score: 178.7
IPR000037SsrA-binding proteinPANTHERPTHR30308TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEXcoord: 6..158
IPR000037SsrA-binding proteinHAMAPMF_00023SmpBcoord: 1..159
score: 72.169
IPR023620Small protein BGENE3D2.40.280.10coord: 7..136
e-value: 9.3E-48
score: 163.4
IPR023620Small protein BSUPERFAMILY74982Small protein B (SmpB)coord: 9..139
IPR020081SsrA-binding protein, conserved sitePROSITEPS01317SSRPcoord: 33..45
NoneNo IPR availablePRODOMPD004488coord: 15..139
e-value: 7.0E-39
score: 400.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79381contigM-pyrifera_M_contig79381:472..951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79381.18640.1mRNA_M-pyrifera_M_contig79381.18640.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79381 472..951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79381.18640.1 ID=prot_M-pyrifera_M_contig79381.18640.1|Name=mRNA_M-pyrifera_M_contig79381.18640.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp
MANKKKSTKTPSATIALNKKARFDYHIEDRIEAGIVLEGWEVKSLRAGKV
QIVDAYVLLKDGEAFLLGVHITPMLAASSHINTDPTRTRKLLLHQQEIAR
LIGAVERKGFTVVCTALYWKHGRAKAELGLAKGKKQHDKRATEKARDWTR
EKQRILKSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000037SsrA-bd_prot
IPR023620SmpB
IPR020081SsrA-bd_prot_CS