mRNA_M-pyrifera_M_contig79380.18639.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79380.18639.1
Unique NamemRNA_M-pyrifera_M_contig79380.18639.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A5A8CCV7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CCV7_CAFRO)

HSP 1 Score: 354 bits (908), Expect = 7.330e-110
Identity = 175/236 (74.15%), Postives = 203/236 (86.02%), Query Frame = 1 
Query:   10 KQAGGEVVRQWAVVKELSVEELDAAEAKRGEAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPF 717
            ++A G     WAV + ++ EELDAAEA+R   ALEFPFTLD FQR+AV  ++EGE+VFVAAHTSAGKTVVAEYAIA C R+ +RC+Y SPIKALSNQK+RDFKDRF DVGLVTGD+SV+PEASCL+MTTEILRSMLYRG+D+VRDIEWVIFDEVHYVND+ERGVVWEETII+LPDHV ++FLSAT+PNT EF EWIGRTKRRPVHV++TS RPVPLSHAL A  + FPL+     F
Sbjct:  185 RRAAGRDADDWAVTRRMTAEELDAAEARR-TPALEFPFTLDTFQREAVAHVDEGESVFVAAHTSAGKTVVAEYAIAQCARNCTRCIYTSPIKALSNQKYRDFKDRFGDVGLVTGDISVDPEASCLVMTTEILRSMLYRGSDVVRDIEWVIFDEVHYVNDSERGVVWEETIILLPDHVGMVFLSATTPNTVEFCEWIGRTKRRPVHVVTTSHRPVPLSHALLAKNKAFPLLTPEGRF 419
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A5A8EJT6_CAFRO (Uncharacterized protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EJT6_CAFRO)

HSP 1 Score: 354 bits (908), Expect = 7.150e-109
Identity = 175/236 (74.15%), Postives = 203/236 (86.02%), Query Frame = 1 
Query:   10 KQAGGEVVRQWAVVKELSVEELDAAEAKRGEAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPF 717
            ++A G     WAV + ++ EELDAAEA+R   ALEFPFTLD FQR+AV  ++EGE+VFVAAHTSAGKTVVAEYAIA C R+ +RC+Y SPIKALSNQK+RDFKDRF DVGLVTGD+SV+PEASCL+MTTEILRSMLYRG+D+VRDIEWVIFDEVHYVND+ERGVVWEETII+LPDHV ++FLSAT+PNT EF EWIGRTKRRPVHV++TS RPVPLSHAL A  + FPL+     F
Sbjct:  670 RRAAGRDADDWAVTRRMTAEELDAAEARR-TPALEFPFTLDTFQREAVAHVDEGESVFVAAHTSAGKTVVAEYAIAQCARNCTRCIYTSPIKALSNQKYRDFKDRFGDVGLVTGDISVDPEASCLVMTTEILRSMLYRGSDVVRDIEWVIFDEVHYVNDSERGVVWEETIILLPDHVGMVFLSATTPNTVEFCEWIGRTKRRPVHVVTTSHRPVPLSHALLAKNKAFPLLTPEGRF 904
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A7S1XU58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU58_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.380e-104
Identity = 162/239 (67.78%), Postives = 190/239 (79.50%), Query Frame = 1 
Query:    7 RKQAGGEVVRQWAVVKELSVEELDAAEAKRGEAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRF--EDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPF 717
            R+ A G   R WAV   L V + +    +    A E+PF LD FQ+QAV  LE+ E+VFVAAHTSAGKTVVAEYA+AL  R+G+RCVY SPIKALSNQKFRDFK+RF  E+VG+VTGDVSVNPEA C+IMTTEILRSMLYRGADLVRD+EWV+FDEVHYVND+ERGVVWEE IIMLP +V ++FLSAT+PNT EF EWIGRTKRRPVHV++TS RPVPL H L   G+ F +++    F
Sbjct:    3 RRAAAGAQRRSWAVTALLDVSDFERLVPR---PAAEWPFELDGFQKQAVCRLEQKEDVFVAAHTSAGKTVVAEYAVALALRNGTRCVYTSPIKALSNQKFRDFKERFGAENVGIVTGDVSVNPEAPCVIMTTEILRSMLYRGADLVRDLEWVVFDEVHYVNDSERGVVWEEVIIMLPSYVGMVFLSATTPNTTEFCEWIGRTKRRPVHVVATSHRPVPLVHHLTLKGKDFVVLDAERRF 238
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A835YZN6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN6_9STRA)

HSP 1 Score: 304 bits (779), Expect = 6.280e-102
Identity = 153/217 (70.51%), Postives = 176/217 (81.11%), Query Frame = 1 
Query:   40 WAVVKELSVEELDAAEAKRGEAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRF-EDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRL 687
            WAV   L V +  +        A+E+PF LD FQ+QAV  LE  E VFVAAHTSAGKTVVAEYAIAL   H +R +Y SPIKALSNQK+RDFK RF +DVGL+TGDVS+NPEASCLIMTTEILRSMLYRGAD+VRDIEWVIFDEVHY+ND ERGVVWEE IIMLP+H  +IFLSAT+PNT EFS+WIGRTK++PVHVI+T  RPVPL H ++A G +
Sbjct:   16 WAVTASLDVSDFRSLVPN---PAIEYPFELDAFQKQAVARLERRECVFVAAHTSAGKTVVAEYAIALAAAHMTRAIYTSPIKALSNQKYRDFKKRFGDDVGLITGDVSINPEASCLIMTTEILRSMLYRGADIVRDIEWVIFDEVHYINDTERGVVWEEVIIMLPEHAGMIFLSATTPNTIEFSDWIGRTKKKPVHVITTDYRPVPLQHFIYAGGEM 229
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 1.090e-97
Identity = 159/228 (69.74%), Postives = 185/228 (81.14%), Query Frame = 1 
Query:   40 WAVVKELSVEELDAAEAKRGEAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPFSS 723
            WAV + L V + DA   +    A  FPFTLD FQ+QAV  LE  E VFV+AHTSAGKTVVAEYAIA+ ++H +R +Y SPIKALSNQK+RDFK RF DVGL+TGDVS+NPEASCLIMTTEILRSMLYRGADL+RDIEWVIFDEVHYVND+ERGVVWEE IIMLP+H ++IFLSAT+PNT EF +WIGRTKR+PVHVI+T+ RPVPL H L A   L P+++    F S
Sbjct:  412 WAVTELLDVSDFDALVPR---PAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNFGKFES 636
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A080WLX5_TRIRC (Uncharacterized protein n=1 Tax=Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) TaxID=559305 RepID=A0A080WLX5_TRIRC)

HSP 1 Score: 302 bits (773), Expect = 1.120e-97
Identity = 143/204 (70.10%), Postives = 172/204 (84.31%), Query Frame = 1 
Query:  106 ALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPF 717
            A E+PF LD FQ++AV+ LE G++VFVAAHTSAGKTVVAEYAIAL  +H ++ +Y SPIKALSNQKFRDF+  F+DVG++TGD+ +NPEASCLIMTTEILRSMLYRGADL+RD+E+VIFDEVHYVND ERGVVWEE IIMLP+HV LI LSAT PNT EF+ W+GRTK++ ++VIST KRPVPL H LWA   +F +V+    F
Sbjct:    2 AREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSPIKALSNQKFRDFRSTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTPKRPVPLEHYLWAGKEIFKIVDSEKRF 205
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 1.010e-96
Identity = 159/228 (69.74%), Postives = 185/228 (81.14%), Query Frame = 1 
Query:   40 WAVVKELSVEELDAAEAKRGEAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPFSS 723
            WAV + L V + DA   +    A  FPFTLD FQ+QAV  LE  E VFV+AHTSAGKTVVAEYAIA+ ++H +R +Y SPIKALSNQK+RDFK RF DVGL+TGDVS+NPEASCLIMTTEILRSMLYRGADL+RDIEWVIFDEVHYVND+ERGVVWEE IIMLP+H ++IFLSAT+PNT EF +WIGRTKR+PVHVI+T+ RPVPL H L A   L P+++    F S
Sbjct:  567 WAVTELLDVSDFDALVPR---PAHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHNLLAGNELHPIMDNFGKFES 791
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A4P9XVD3_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XVD3_9FUNG)

HSP 1 Score: 303 bits (775), Expect = 1.730e-96
Identity = 148/208 (71.15%), Postives = 174/208 (83.65%), Query Frame = 1 
Query:  100 EAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPFSS 723
            E A EFPF LD FQ+QAV+ LE GE+VFVAAHTSAGKTVVAEYAIAL  +H +R +Y SPIKALSNQKFRDF+  FEDVG++TGDV ++PEASCLIMTTEILRSMLYRGADL+RD+E+VIFDEVHYVND ERGVVWEE IIMLP HV LI LSAT PNT EF++W+GRTK++ ++VIST KRPVPL H +WA   +  +V++   F S
Sbjct:   38 ELAREFPFELDTFQKQAVYHLERGESVFVAAHTSAGKTVVAEYAIALAAKHMTRAIYTSPIKALSNQKFRDFRGTFEDVGILTGDVQIDPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDTERGVVWEEVIIMLPAHVTLILLSATVPNTREFADWVGRTKKQDIYVISTLKRPVPLEHFVWAGNDVHRIVDEKRTFLS 245
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A8H5DBU2_9HYPO (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Fusarium sp. NRRL 66182 TaxID=2692428 RepID=A0A8H5DBU2_9HYPO)

HSP 1 Score: 296 bits (759), Expect = 2.590e-96
Identity = 142/206 (68.93%), Postives = 172/206 (83.50%), Query Frame = 1 
Query:  100 EAALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPF 717
            + A E+PF LD FQ++AV+ LE G++VFVAAHTSAGKTVVAEYAIAL  +H ++ +Y SPIKALSNQKFRDF+  F++VG++TGDV +NPEASCLIMTTEILRSMLYRGADL+RD+E+VIFDEVHYVND ERGVVWEE IIMLP+HV LI LSAT PNT EF+ W+GRTK++ ++VIST KRPVPL H LWA   +  +V+    F
Sbjct:   96 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDFERGVVWEEVIIMLPEHVSLILLSATVPNTKEFASWVGRTKQKDIYVISTPKRPVPLEHYLWAGKDIHKIVDSEKKF 301
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BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Match: A0A022VZB3_TRIRU (Uncharacterized protein n=2 Tax=Trichophyton TaxID=5550 RepID=A0A022VZB3_TRIRU)

HSP 1 Score: 302 bits (773), Expect = 9.890e-96
Identity = 143/204 (70.10%), Postives = 172/204 (84.31%), Query Frame = 1 
Query:  106 ALEFPFTLDHFQRQAVHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQKFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIEWVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIGRTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPF 717
            A E+PF LD FQ++AV+ LE G++VFVAAHTSAGKTVVAEYAIAL  +H ++ +Y SPIKALSNQKFRDF+  F+DVG++TGD+ +NPEASCLIMTTEILRSMLYRGADL+RD+E+VIFDEVHYVND ERGVVWEE IIMLP+HV LI LSAT PNT EF+ W+GRTK++ ++VIST KRPVPL H LWA   +F +V+    F
Sbjct:    2 AREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSPIKALSNQKFRDFRSTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTPKRPVPLEHYLWAGKEIFKIVDSEKRF 205
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79380.18639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CCV7_CAFRO7.330e-11074.15Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EJT6_CAFRO7.150e-10974.15Uncharacterized protein n=6 Tax=Cafeteria roenberg... [more]
A0A7S1XU58_9STRA1.380e-10467.78Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835YZN6_9STRA6.280e-10270.51P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5KP96_9PHAE1.090e-9769.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A080WLX5_TRIRC1.120e-9770.10Uncharacterized protein n=1 Tax=Trichophyton rubru... [more]
D7FJL2_ECTSI1.010e-9669.74DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A4P9XVD3_9FUNG1.730e-9671.15P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8H5DBU2_9HYPO2.590e-9668.93Helicase ATP-binding domain-containing protein (Fr... [more]
A0A022VZB3_TRIRU9.890e-9670.10Uncharacterized protein n=2 Tax=Trichophyton TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79380contigM-pyrifera_M_contig79380:71..793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.2
Seed ortholog evalue4e-85
Seed eggNOG ortholog2880.D7FJL2
Preferred nameSKIV2L
KEGG koko:K12599
KEGG Pathwayko03018,map03018
KEGG ModuleM00392
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000288,GO:0000291,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0015672,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019439,GO:0023052,GO:0030001,GO:0030968,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034427,GO:0034620,GO:0034641,GO:0034655,GO:0034976,GO:0035864,GO:0035966,GO:0035967,GO:0040029,GO:0042221,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055087,GO:0060255,GO:0065007,GO:0070013,GO:0070035,GO:0070478,GO:0070481,GO:0070887,GO:0071310,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
EggNOG OGsCOG4581@1,KOG0947@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Exons1
Model size723
Cds size723
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816697.3127947-CDS-M-pyrifera_M_contig79380:70..7931622816697.3127947-CDS-M-pyrifera_M_contig79380:70..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79380 71..793 -
1692278125.6124065-CDS-M-pyrifera_M_contig79380:70..7931692278125.6124065-CDS-M-pyrifera_M_contig79380:70..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79380 71..793 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79380.18639.1prot_M-pyrifera_M_contig79380.18639.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79380 71..793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79380.18639.1

>prot_M-pyrifera_M_contig79380.18639.1 ID=prot_M-pyrifera_M_contig79380.18639.1|Name=mRNA_M-pyrifera_M_contig79380.18639.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
MRRKQAGGEVVRQWAVVKELSVEELDAAEAKRGEAALEFPFTLDHFQRQA
VHWLEEGENVFVAAHTSAGKTVVAEYAIALCERHGSRCVYCSPIKALSNQ
KFRDFKDRFEDVGLVTGDVSVNPEASCLIMTTEILRSMLYRGADLVRDIE
WVIFDEVHYVNDAERGVVWEETIIMLPDHVHLIFLSATSPNTAEFSEWIG
RTKRRPVHVISTSKRPVPLSHALWAHGRLFPLVEKAAPFSS
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mRNA from alignment at M-pyrifera_M_contig79380:71..793-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79380.18639.1 ID=mRNA_M-pyrifera_M_contig79380.18639.1|Name=mRNA_M-pyrifera_M_contig79380.18639.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig79380:71..793- (Macrocystis pyrifera P11B4 male)
ATGCGGAGGAAGCAGGCTGGTGGGGAGGTTGTGCGGCAGTGGGCAGTGGT
GAAGGAGTTGAGTGTGGAGGAGTTGGATGCTGCTGAGGCGAAGAGAGGAG
AGGCAGCTTTGGAATTTCCATTCACGTTGGACCATTTTCAAAGACAAGCC
GTGCATTGGCTGGAGGAAGGGGAGAATGTGTTTGTGGCAGCGCATACGAG
CGCCGGGAAGACGGTGGTGGCAGAGTACGCGATTGCGCTATGTGAGCGGC
ATGGGAGCCGATGTGTATACTGCTCTCCGATCAAGGCGTTGAGCAACCAA
AAGTTCCGCGATTTCAAGGATCGCTTCGAAGACGTTGGGTTGGTGACGGG
CGATGTGAGCGTAAACCCCGAGGCCTCCTGCCTGATCATGACCACGGAAA
TCCTGCGGTCCATGCTCTACCGCGGTGCGGACTTGGTGCGGGATATCGAG
TGGGTCATCTTCGACGAGGTGCACTATGTGAACGATGCGGAGCGCGGCGT
GGTCTGGGAGGAGACCATCATCATGCTGCCGGACCATGTGCACCTCATCT
TCCTCTCGGCCACCTCTCCCAACACTGCGGAATTTTCAGAGTGGATCGGA
AGGACCAAGCGAAGGCCCGTGCACGTCATCTCCACTTCGAAACGGCCCGT
TCCGCTCTCGCACGCCCTCTGGGCGCACGGGAGATTATTTCCGCTCGTCG
AAAAAGCCGCTCCTTTCTCCAGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79380:71..793-

>mRNA_M-pyrifera_M_contig79380.18639.1 ID=mRNA_M-pyrifera_M_contig79380.18639.1|Name=mRNA_M-pyrifera_M_contig79380.18639.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig79380:71..793- (Macrocystis pyrifera P11B4 male)
ATGCGGAGGAAGCAGGCTGGTGGGGAGGTTGTGCGGCAGTGGGCAGTGGT
GAAGGAGTTGAGTGTGGAGGAGTTGGATGCTGCTGAGGCGAAGAGAGGAG
AGGCAGCTTTGGAATTTCCATTCACGTTGGACCATTTTCAAAGACAAGCC
GTGCATTGGCTGGAGGAAGGGGAGAATGTGTTTGTGGCAGCGCATACGAG
CGCCGGGAAGACGGTGGTGGCAGAGTACGCGATTGCGCTATGTGAGCGGC
ATGGGAGCCGATGTGTATACTGCTCTCCGATCAAGGCGTTGAGCAACCAA
AAGTTCCGCGATTTCAAGGATCGCTTCGAAGACGTTGGGTTGGTGACGGG
CGATGTGAGCGTAAACCCCGAGGCCTCCTGCCTGATCATGACCACGGAAA
TCCTGCGGTCCATGCTCTACCGCGGTGCGGACTTGGTGCGGGATATCGAG
TGGGTCATCTTCGACGAGGTGCACTATGTGAACGATGCGGAGCGCGGCGT
GGTCTGGGAGGAGACCATCATCATGCTGCCGGACCATGTGCACCTCATCT
TCCTCTCGGCCACCTCTCCCAACACTGCGGAATTTTCAGAGTGGATCGGA
AGGACCAAGCGAAGGCCCGTGCACGTCATCTCCACTTCGAAACGGCCCGT
TCCGCTCTCGCACGCCCTCTGGGCGCACGGGAGATTATTTCCGCTCGTCG
AAAAAGCCGCTCCTTTCTCCAGCATGCGGAGGAAGCAGGCTGGTGGGGAG
GTTGTGCGGCAGTGGGCAGTGGTGAAGGAGTTGAGTGTGGAGGAGTTGGA
TGCTGCTGAGGCGAAGAGAGGAGAGGCAGCTTTGGAATTTCCATTCACGT
TGGACCATTTTCAAAGACAAGCCGTGCATTGGCTGGAGGAAGGGGAGAAT
GTGTTTGTGGCAGCGCATACGAGCGCCGGGAAGACGGTGGTGGCAGAGTA
CGCGATTGCGCTATGTGAGCGGCATGGGAGCCGATGTGTATACTGCTCTC
CGATCAAGGCGTTGAGCAACCAAAAGTTCCGCGATTTCAAGGATCGCTTC
GAAGACGTTGGGTTGGTGACGGGCGATGTGAGCGTAAACCCCGAGGCCTC
CTGCCTGATCATGACCACGGAAATCCTGCGGTCCATGCTCTACCGCGGTG
CGGACTTGGTGCGGGATATCGAGTGGGTCATCTTCGACGAGGTGCACTAT
GTGAACGATGCGGAGCGCGGCGTGGTCTGGGAGGAGACCATCATCATGCT
GCCGGACCATGTGCACCTCATCTTCCTCTCGGCCACCTCTCCCAACACTG
CGGAATTTTCAGAGTGGATCGGAAGGACCAAGCGAAGGCCCGTGCACGTC
ATCTCCACTTCGAAACGGCCCGTTCCGCTCTCGCACGCCCTCTGGGCGCA
CGGGAGATTATTTCCGCTCGTCGAAAAAGCCGCTCCTTTCTCCAGC
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