prot_M-pyrifera_M_contig79374.18635.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79374.18635.1
Unique Nameprot_M-pyrifera_M_contig79374.18635.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
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BLAST of mRNA_M-pyrifera_M_contig79374.18635.1 vs. uniprot
Match: A0A138ZWJ4_GONPJ (HCP-like protein (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A138ZWJ4_GONPJ)

HSP 1 Score: 56.6 bits (135), Expect = 3.260e-7
Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 0 
Query:    1 FLRAAQQGDVYSNAYLGDLYDYERGLGEDIPAATKWYRKAADKNNY---------YGYLGLGFIEYYKHSNPKQAVVWFEKAARLAKQEVDPDAWYMLGLIYCLKEKNFVKARAYYERAAIEGHHTDACYMLAELY 127
            +  AA QG V +   LG +  +  G+  D   A KW++KAA++ N+            LGLG  E     N +QA+ +    A    Q+ + DA + +G++ C  + NF  A+++Y+ A  +GH   A   L +LY
Sbjct:    2 YCHAADQGHVVAQTRLGFMLMHRYGVKWDYKEAVKWFKKAAEEQNFPVAKVLLAECYLLGLGVEE-----NLEQAIRYLSDVA----QDGNADAQFNMGMV-CEHQNNFDGAKSWYKEAVKQGH-AGAMANLGDLY 126
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79374.18635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A138ZWJ4_GONPJ3.260e-730.15HCP-like protein (Fragment) n=1 Tax=Gonapodya prol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 83..115
e-value: 7.2
score: 14.9
coord: 10..45
e-value: 3.5E-4
score: 29.9
coord: 46..78
e-value: 200.0
score: 2.3
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 118..127
e-value: 89.0
score: 4.0
coord: 12..45
e-value: 5.6E-4
score: 20.5
coord: 48..76
e-value: 0.01
score: 16.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 79..136
e-value: 1.5E-10
score: 43.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..78
e-value: 6.1E-15
score: 57.2
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 84..110
e-value: 0.0013
score: 18.8
NoneNo IPR availablePANTHERPTHR43628FAMILY NOT NAMEDcoord: 1..109
coord: 53..127
NoneNo IPR availablePANTHERPTHR43628:SF1ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 1..109
coord: 53..127
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 2..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79374contigM-pyrifera_M_contig79374:15..425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79374.18635.1mRNA_M-pyrifera_M_contig79374.18635.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79374 15..425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79374.18635.1 ID=prot_M-pyrifera_M_contig79374.18635.1|Name=mRNA_M-pyrifera_M_contig79374.18635.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
FLRAAQQGDVYSNAYLGDLYDYERGLGEDIPAATKWYRKAADKNNYYGYL
GLGFIEYYKHSNPKQAVVWFEKAARLAKQEVDPDAWYMLGLIYCLKEKNF
VKARAYYERAAIEGHHTDACYMLAELYSQEGCERSEY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat