mRNA_M-pyrifera_M_contig79271.18610.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79271.18610.1
Unique NamemRNA_M-pyrifera_M_contig79271.18610.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: A0A3D3HGJ4_9BACT (Fibronectin type-III domain-containing protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3D3HGJ4_9BACT)

HSP 1 Score: 184 bits (466), Expect = 2.590e-48
Identity = 142/298 (47.65%), Postives = 187/298 (62.75%), Query Frame = 1
Query:    1 ASSGLGIVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPDQMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATADNKSKAFGEVNPTLTISYTGFATGDNVSAI-TAPTIATTAITTSDAGSYGISLTGGSGGANYNLTIVDGALTINKATQTITFTTISNQTLQNSPITLQANATSGLSVVF-TLLEGDGVISGNELTFNGAGTFKVNAAQSGNTNYLAA 888
            ASSGL I Y SSNT VA V+  G + I+G GS++ITASQAGD N+NAA D +Q LTV     Q++TF A+  V YG+  F +  A   S   +T++S NTAVA +    +T+  AGT  ITASQAG+  YNPA D   +LTV KA LT TAD+K++A+ E NPT T +  GF  GDN+SA+  AP  +T A + S  G+Y I LTGG    NY+L + +G LT+ + TQT+TFT+   + L      LQA A+SGL V+F +  E    +SG+ LT  G GT  V A Q+G+ NY  A
Sbjct: 1222 ASSGLTISYTSSNTDVAVVSG-GMIMIIGAGSSDITASQAGDDNYNAAMDVVQVLTVEKA-DQSVTFTAIDPVLYGATPF-IPDAVASSSLPVTFSSDNTAVAEIISGYLTVRSAGTAVITASQAGDVNYNPAEDTQVTLTVGKAILTVTADDKTRAYLEQNPTFTFTCEGFVNGDNISALDNAPAPSTQATSASPVGTYSIILTGGDDN-NYDLVLEEGVLTVTRITQTVTFTSWPEELLVTKTGELQATASSGLQVLFESTNESLATVSGSTLTGVGRGTVVVRAYQAGDINYSPA 1515          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: A0A7W7ZBT2_9BACT (Uncharacterized protein n=1 Tax=Granulicella aggregans TaxID=474949 RepID=A0A7W7ZBT2_9BACT)

HSP 1 Score: 182 bits (461), Expect = 1.240e-47
Identity = 132/278 (47.48%), Postives = 171/278 (61.51%), Query Frame = 1
Query:   91 GSTNITASQAGDGNWNAAPDQMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATADNKSKAFGEVNPTLTISYTGFATGDNVSAITAP-TIATTAITTSDAGSYGISL-TGGSGGANYNLTIVDGALTINK-ATQTITFTTISNQTLQNSPITLQANATSGLSVVFTLLEGDGVISGNELTFNGAGTFKVNAAQSGNTNYLAANTLEQTFVV 915
            G+ ++ AS  GD N+ A+    Q+LT+     QTITF AL N TYG+A F LTA    S   L  T + T  ATV+GS VTI G G   +TA+QAGN+TY  A+ V QS TV KA LTATA N S+AFG  NPTLT +  GF  GD  + I+   T+ATTA TTS AG+Y I+  T      NY+ T V G LT++  A QTITF TI N  + ++P TL A A+SGL+V + +  G   I+G+ +T  GAGT  + A Q+G+T Y AA  + Q+F V
Sbjct: 1394 GTYSVIASYGGDANYQASASAAQTLTIAKTA-QTITFGALGNKTYGAAPFTLTATASSS---LAVTFTVTGPATVTGSTVTITGVGQVVVTAAQAGNATYAAATSVSQSFTVTKAVLTATAANLSRAFGAANPTLTYATAGFVNGDTAAVISGTATLATTATTTSPAGTYPITFATQALTATNYSFTYVPGTLTVHGGAAQTITFPTILNHIVGDAPFTLSATASSGLAVSYAVTSGPATITGSVVTLTGAGTVTIQATQTGDTTYAAATPVSQSFTV 1667          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: A0A1G1BWB3_9BACT (Cadherin domain-containing protein n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1BWB3_9BACT)

HSP 1 Score: 180 bits (456), Expect = 6.190e-47
Identity = 126/263 (47.91%), Postives = 167/263 (63.50%), Query Frame = 1
Query:  187 QTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATADNKSKAFGEVNPTLTISYTGFATGDNVSAITA-PTIATTAITTSDAGSYGISLTGGSGGANYNLTIVDGALTINKATQTITFTTISNQTLQNSPITLQANATSGLSVVFTLLEGD-GVISGNELTFNGAGTFKVNAAQSGNTNYLAANTLEQTFVVTSPT----KQDQTITFEA 957
            QTITF A++  TYG A F L A  G SG A+ Y S +  VAT+SGS VT+VGAG   I A+QAGN+ Y PA DV +S TV + +L  TA+NKS+ +G+ NP LT++YTGFA GDN S + A PT  T A   S AGSY I+L+GGS  ANY LT+ +G LT++KA QTI+F  +  +T  ++   L  +ATSGL V FT L      +SG+ +T  GAGT  + AAQ+G+ NY AA  +++   V   T     +D T T+ A
Sbjct: 2477 QTITFPAIAGRTYGDATFALNATSG-SGLAVIYVSLDETVATLSGSTVTVVGAGLATIRATQAGNANYGPAPDVTRSFTVARKSLIVTAENKSRPYGQANPPLTVAYTGFAAGDNASVLDAQPTATTVADAASPAGSYAITLSGGSD-ANYALTLQNGTLTVSKAAQTISFAALDVKTYGDASFGLSGSATSGLLVAFTSLNTSVATVSGSTVTIVGAGTATIRAAQAGDGNYTAAPNVDRVLTVNKKTLTVSAEDNTRTYGA 2737          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: A0A7Y4R033_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4R033_9BACT)

HSP 1 Score: 179 bits (455), Expect = 7.850e-47
Identity = 137/235 (58.30%), Postives = 162/235 (68.94%), Query Frame = 1
Query:    1 ASSGLGIVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPDQMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATADNKSKAFGEVNPTLTISYTGFATGDNVSAITAPTIATT-AITTSDAGSYGISLTGGSGGANYNLTIVDGALTINKATQTITFTT 702
            ASSGL + Y SSN AVATV+    V+IVGVGST ITASQAG+ ++ AA    Q LTV   L QTITF AL   TYG ADF LTA    SG ++ Y SSN +VAT++GS VTIVGAGTT ITASQ GN  Y  A  + Q+L V KA +TA+AD K+K +G+VNP LTI+YTGF   DN S I  P I +T A+TTS+ GSY I+LTGG    NY LT+V+  LTINKAT T T  T
Sbjct:  763 ASSGLSVSYTSSNPAVATVSGN-IVTIVGVGSTTITASQAGNASFGAATSVDQILTVK--LGQTITFGALGAKTYGDADFALTATAS-SGLSVNYMSSNPSVATITGSTVTIVGAGTTVITASQPGNINYVAALSIDQTLIVSKAAVTASADAKTKLYGDVNPVLTITYTGFKGTDNPSVIDTPVIISTPALTTSNVGSYPITLTGGLDN-NYILTLVNSTLTINKATLTATAAT 992          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: A0A1Q3GZ96_9BACT (Uncharacterized protein n=1 Tax=marine bacterium AO1-C TaxID=1905359 RepID=A0A1Q3GZ96_9BACT)

HSP 1 Score: 172 bits (436), Expect = 4.280e-45
Identity = 119/263 (45.25%), Postives = 163/263 (61.98%), Query Frame = 1
Query:  187 QTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATADNKSKAFGEVNPTLTISYTGFATGDNVSAITAPTIATT-AITTSDAGSYGISLTGGSGGANYNLTIVDGALTINKATQTITFTTISNQTLQNSPITLQANATSGLSVVFTLLE-GDGVISGNELTFNGAGTFKVNAAQSGNTNYLAANTLEQTFVVTSPTKQDQTITFEAIPAK 969
            Q +TF AL +  YG ++FNL+A GG SGN +T+ SSNT+VAT+SG+ VTIV AGT NITASQAGN  YN + D++Q LT+ K  L  TA+++++AFG+ NPT +++Y GF  GDN   +  P IATT AI +S   +Y I  +GG    NY+   V+G LTI KA Q I    +  +T  +    L+A   + L++ +       G ISGN +T  GAGT  + A+Q G+ NY  AN + QT  +    K DQ I FE +PAK
Sbjct:  257 QALTFEALVDKDYGDSNFNLSAIGGASGNPVTFVSSNTSVATISGNTVTIVRAGTVNITASQAGNDIYNASPDIVQPLTIHKKTLVVTANDQNRAFGDSNPTFSLTYEGFVNGDNEVVLDNPPIATTNAIISSIPEAYSIIASGGQDD-NYSFNYVNGTLTIVKAAQVINLNPLPMKTTIDPSFDLEAVTNANLAISYRSSNPAVGTISGNTVTIVGAGTTNITASQPGDGNYNPANEVVQTLKII---KADQVIAFEPLPAK 515          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: A0A0N8W5T8_9SPHI (Uncharacterized protein (Fragment) n=1 Tax=Pedobacter sp. Hv1 TaxID=1740090 RepID=A0A0N8W5T8_9SPHI)

HSP 1 Score: 174 bits (441), Expect = 5.970e-45
Identity = 151/326 (46.32%), Postives = 193/326 (59.20%), Query Frame = 1
Query:   19 IVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPDQMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATADN-KSKAFGEVNPTLTISYTGFATGDNVSAITA----PTIATTAITTSDAGSYGISLTGGSGGANYNLTI-VDGALTINKATQTITFTTISNQTLQNSPITLQANATSGLSVVFTLLEGD---GVISGNELTFNGAGTFKVNAAQSGNTNYLAANTLEQTFVVTSPTKQDQTITFEAIPAK 969
            I YVSSNT VAT+     V+IVG GST ITASQ GDGN+NAA    Q+LTV     Q ITF AL+N TY  A F LTA GGGS   +TY SSNT+VAT+ G+ V+IVGAG T ITASQAG+  YN AS V Q LTV KAN T T     +K +G+V   LT   TG  +   ++ I++     TI    +T   AG+  I+ +   G  NYN  I VD  LT+NKA Q+ITF  ++N+T  ++  TL A    G +   T L  +     I GN +T  GAG   + A+Q+G++NY AA  ++QT  V    K  QT+TF A+  K
Sbjct: 2345 ITYVSSNTNVATIVGN-LVTIVGAGSTTITASQTGDGNYNAASAVDQTLTVGKA-NQIITFTALTNKTYNDAPFALTATGGGSNQTITYISSNTSVATIVGNIVSIVGAGNTTITASQAGDGNYNAASAVDQVLTVGKANQTITFTALTNKTYGDVPFALTA--TGGGSNQTITYISSNTNVATIVGNQVTIVGAGNTTITASQ-VGNGNYNAAIAVDQVLTVNKAAQSITFAALANKTYGDAAFTLNATG-GGSNQTITYLSSNTNVATIVGNLVTIIGAGNTTITASQAGDSNYTAAIPVDQTLTVN---KAAQTLTFAALANK 2661          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: UPI0018ECC6A8 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Pedobacter sp. ASV17 TaxID=2795121 RepID=UPI0018ECC6A8)

HSP 1 Score: 171 bits (434), Expect = 5.050e-44
Identity = 147/329 (44.68%), Postives = 202/329 (61.40%), Query Frame = 1
Query:    7 SGLGIVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPDQMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTAT-ADNKSKAFGEVNPTLTISYTGFATGDNV----SAITAPTIATTAITTSDAGSYGISLTGGSGGANYN-LTIVDGALTINKATQTITFTTISNQTLQNSPITLQANA-TSGLSVVFTLLEGD-GVISGNELTFNGAGTFKVNAAQSGNTNYLAANTLEQTFVVTSPTKQDQTITFEAIPAK 969
            SG  + Y SSN++VAT+    TV+IVGVGST ITASQ G+ N+N A    Q+LTV+   +QTI+F AL+N TYG ADFNL+A GG SG+A+TYTSSN +VAT+ GS VTIVGAG+  ITASQ GN+ YN A+ V Q LTV KA+ + + A   +K +G+ +    +  TG A+G  V    S ++  TI    +T   AGS  I+ +   G ANY+    V   LT++KA+QTI+F  ++N+T  ++   L A    SG +V +T        I GN +T  G G+  + A+Q G+ NY AA  ++QT  V    K  QTI+F A+  K
Sbjct: 2080 SGSAVTYTSSNSSVATILGN-TVTIVGVGSTTITASQLGNANYNDAASVQQTLTVDKA-SQTISFAALANKTYGDADFNLSATGGVSGSAVTYTSSNPSVATILGSTVTIVGAGSATITASQLGNANYNDATSVQQILTVGKASQSISFAALANKTYGDAD--FNLIATGGASGSVVTYTSSNLSVATILGNTVTIVGAGSTTITASQ-LGNANYDDAANVQQTLTVDKASQTISFAALANKTYGDADFNLSATGGASGSAVTYTSSNPSVATILGNTVTIVGVGSTTITASQLGDANYDAATNVQQTLTVD---KASQTISFAALANK 2400          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: UPI000A5B86B6 (gliding motility-associated C-terminal domain-containing protein n=1 Tax=Pedobacter sp. Hv1 TaxID=1740090 RepID=UPI000A5B86B6)

HSP 1 Score: 170 bits (430), Expect = 8.680e-44
Identity = 137/309 (44.34%), Postives = 192/309 (62.14%), Query Frame = 1
Query:   19 IVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPDQMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTAT-ADNKSKAFGEVNPTLTISYTGFATGDNVSAITA----PTIATTAITTSDAGSYGISLTGGSGGANYNL-TIVDGALTINKATQTITFTTISNQTLQNSPITLQANATSGLSVVFTLLEGD---GVISGNELTFNGAGTFKVNAAQSGNTNYLAANTLEQTFVVT 918
            I YVSSNT+VAT+     V+IVG G+T ITASQAGDGN+NAA    Q+LTV    +Q I+F AL+N TYG A F LTA GGGS   +TY SSNT VAT+ G++VTIVGAG+T ITASQ G++ YN A+ V Q LTV+KA  T T A   +K +G+V    T++ TG  +   ++ +++     TI    +T   AGS  I+ +  +G  NYN  + +D  LT+ KA QTITF  ++N+T  ++   L A    G +   T +  +     I GN +T  GAG   + A+Q+GN NY AA +++++ ++T
Sbjct:    4 ITYVSSNTSVATIVGN-LVTIVGAGNTTITASQAGDGNYNAATPVDQTLTVGKA-SQIISFAALANKTYGDAPFGLTATGGGSNQTVTYVSSNTNVATIVGNQVTIVGAGSTTITASQVGDANYNVANSVDQVLTVNKAAQTITFAALANKTYGDVP--FTLNATGGDSNQTITYVSSNTNVATIVGNTVTIIGAGSSSITASQ-AGNGNYNAASSIDQTLTVGKAAQTITFNALTNKTYGDAAFALNATG-GGSNQTITYVSSNTSVATIIGNMVTIVGAGNTTITASQTGNGNYNAATSVDRSLIIT 306          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: A0A1F3NWZ8_9BACT (Fibronectin type-III domain-containing protein n=1 Tax=Bacteroidetes bacterium RBG_13_42_15 TaxID=1797355 RepID=A0A1F3NWZ8_9BACT)

HSP 1 Score: 169 bits (427), Expect = 3.670e-43
Identity = 130/298 (43.62%), Postives = 182/298 (61.07%), Query Frame = 1
Query:    1 ASSGLGIVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPDQMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATADNKSKAFGEVNPTLTISYTGFATGDNVSAITAPTIATTAITT-SDAGSYGISLTGGSGGANYNLTIVDGALTINKATQTITFTTISNQTLQNSPITLQANATSGLSVVFTLLEGDGV-ISGNELTFNGAGTFKVNAAQSGNTNYLAA 888
            ASS L I + S NT VA +T  G + IV  G+T I ASQ+G+ N+N APD  Q+LT+N  + Q ITF A++ V YG A FN   A   SG  +TY+S NT+VA +   ++ I  AG++NITASQAG++ ++PA D + ++TV KA+LT TADNKSK +   NP LT + +G   G+ V+ +  P + +TA +  S AG Y I+++GG     Y++T V G +TI    QTITFT+  ++ L      L A+ATSGL V F   E +   ++G+ LT    G   + A Q GN NY AA
Sbjct:  719 ASSSLNITFTSENTNVAVITG-GLIHIVNAGTTIIKASQSGNQNYNPAPDVTQTLTINKAV-QVITFPAIAPVVYGVASFNA-GASSTSGLTVTYSSDNTSVAEIIKGKINIRNAGSSNITASQAGDNNFSPAEDKMVNITVTKAHLTITADNKSKPYLSANPALTFTCSGLVYGETVAVLDTPPLTSTAASADSPAGDYVITISGGDDNC-YDITYVAGTMTITMIPQTITFTSYPDKLLVTETFELVASATSGLPVSFESKEPEVARVNGSVLTGLSRGNANIRAYQQGNQNYYAA 1012          
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Match: UPI001C584099 (T9SS type A sorting domain-containing protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C584099)

HSP 1 Score: 167 bits (423), Expect = 1.440e-42
Identity = 158/392 (40.31%), Postives = 202/392 (51.53%), Query Frame = 1
Query:   10 GLGIVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPDQMQSLTVN-------------------------------------------------------NLLT---------------------QTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNTAVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTATAD-NKSKAFGEVNPTLTISYTGFA--TGDNVSAITAPTIATTAITTSDAGSYGISLTGGSGGANYNLTIVDGALTINKATQTITFTTISNQTLQNSPITLQANATSGLSVVFTLLEGDGV-ISGNELTFNGAGTFKVNAAQSGNTNYLAANTLEQTFVVTSPTKQDQTI 945
            GL I Y SSNT+VATV+   TV+IVGVGST ITASQAG+ N+NAA D  Q+LTVN                                                       NL T                     Q ITFN L++ TYG ADFNLTA+   +G A++YTSSNT+VATVSG+ VTIVG G+T ITASQAGN+ YN A DV Q LTV+   +T TAD N+SK FG   P LT + T  +  +GD ++   A T         D GSY I+  G     NY +  +  +  INKA Q ITF  +SN  L N    L A A+SGL++ ++  +   V ISGN  T +  G+  ++A Q GN NY AA  ++++  V S   QD+ I
Sbjct: 1800 GLAISYTSSNTSVATVSGN-TVTIVGVGSTTITASQAGNNNYNAAIDVSQTLTVNPRAITVTADSGQSKVFGSAEPVLTYTITSSSLISGDILNGTLARTAGEDVGFYPINLGTLGNSNYDITFISNDFEITGVNQVITFNNLADATYGDADFNLTASSD-AGLAISYTSSNTSVATVSGNTVTIVGVGSTTITASQAGNNNYNAAVDVSQMLTVNPRAITVTADANQSKTFGATEPVLTYTITSSSLISGDILNGTLARTAG------EDVGSYPINQ-GTLNHPNYQINFITNSFEINKADQFITFDELSNVKLGNPAFELNAIASSGLAITYSSSDPSIVSISGNMATIHKKGSVIISAYQDGNENYHAATFIDRSLTVLSGQIQDELI 2182          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79271.18610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3HGJ4_9BACT2.590e-4847.65Fibronectin type-III domain-containing protein n=1... [more]
A0A7W7ZBT2_9BACT1.240e-4747.48Uncharacterized protein n=1 Tax=Granulicella aggre... [more]
A0A1G1BWB3_9BACT6.190e-4747.91Cadherin domain-containing protein n=1 Tax=Lentisp... [more]
A0A7Y4R033_9BACT7.850e-4758.30Uncharacterized protein (Fragment) n=1 Tax=Cycloba... [more]
A0A1Q3GZ96_9BACT4.280e-4545.25Uncharacterized protein n=1 Tax=marine bacterium A... [more]
A0A0N8W5T8_9SPHI5.970e-4546.32Uncharacterized protein (Fragment) n=1 Tax=Pedobac... [more]
UPI0018ECC6A85.050e-4444.68right-handed parallel beta-helix repeat-containing... [more]
UPI000A5B86B68.680e-4444.34gliding motility-associated C-terminal domain-cont... [more]
A0A1F3NWZ8_9BACT3.670e-4343.62Fibronectin type-III domain-containing protein n=1... [more]
UPI001C5840991.440e-4240.31T9SS type A sorting domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79271contigM-pyrifera_M_contig79271:2..970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score162.2
Seed ortholog evalue4.2e-37
Seed eggNOG ortholog269798.CHU_1335
KEGG rclassRC00275,RC02555
KEGG koko:K01179,ko:K12567,ko:K16966,ko:K17049,ko:K17052,ko:K20276
KEGG TC5.A.3.8,5.A.3.9
KEGG ReactionR05745,R06200,R09500,R11307,R11308
KEGG Pathwayko00500,ko00642,ko00920,ko01100,ko01120,ko01220,ko02024,ko05410,ko05414,map00500,map00642,map00920,map01100,map01120,map01220,map02024,map05410,map05414
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0042597,GO:0044464
EggNOG free text desc.regulator of chromosome condensation, RCC1
EggNOG OGs47R6W@768503,4PM1S@976,COG2010@1,COG2010@2,COG2911@1,COG2911@2,COG3291@1,COG3291@2,COG4733@1,COG4733@2
EC2.7.11.1,3.2.1.4
COG Functional cat.C
CAZyGH5,GH9
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko02000,ko04131,ko04147,ko04812
Exons1
Model size969
Cds size969
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816695.8280709-CDS-M-pyrifera_M_contig79271:1..9701622816695.8280709-CDS-M-pyrifera_M_contig79271:1..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79271 2..970 +
1692278124.838771-CDS-M-pyrifera_M_contig79271:1..9701692278124.838771-CDS-M-pyrifera_M_contig79271:1..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79271 2..970 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79271.18610.1prot_M-pyrifera_M_contig79271.18610.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79271 2..970 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79271.18610.1

>prot_M-pyrifera_M_contig79271.18610.1 ID=prot_M-pyrifera_M_contig79271.18610.1|Name=mRNA_M-pyrifera_M_contig79271.18610.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=323bp
ASSGLGIVYVSSNTAVATVTPTGTVSIVGVGSTNITASQAGDGNWNAAPD
QMQSLTVNNLLTQTITFNALSNVTYGSADFNLTAAGGGSGNALTYTSSNT
AVATVSGSRVTIVGAGTTNITASQAGNSTYNPASDVIQSLTVDKANLTAT
ADNKSKAFGEVNPTLTISYTGFATGDNVSAITAPTIATTAITTSDAGSYG
ISLTGGSGGANYNLTIVDGALTINKATQTITFTTISNQTLQNSPITLQAN
ATSGLSVVFTLLEGDGVISGNELTFNGAGTFKVNAAQSGNTNYLAANTLE
QTFVVTSPTKQDQTITFEAIPAK
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mRNA from alignment at M-pyrifera_M_contig79271:2..970+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79271.18610.1 ID=mRNA_M-pyrifera_M_contig79271.18610.1|Name=mRNA_M-pyrifera_M_contig79271.18610.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=969bp|location=Sequence derived from alignment at M-pyrifera_M_contig79271:2..970+ (Macrocystis pyrifera P11B4 male)
GCGTCTTCTGGGTTAGGGATTGTTTATGTGAGTTCCAATACAGCCGTAGC AACGGTCACTCCAACAGGTACAGTATCGATAGTAGGCGTGGGAAGTACGA ATATCACTGCCTCACAGGCAGGAGATGGCAACTGGAATGCAGCACCCGAT CAAATGCAATCCCTGACAGTGAATAATCTGCTGACGCAAACGATCACTTT CAATGCGCTGAGTAATGTAACTTATGGAAGTGCGGATTTCAATCTGACAG CCGCAGGTGGCGGATCAGGTAATGCGTTGACTTACACCAGTTCAAATACA GCAGTAGCAACAGTATCAGGGAGCAGGGTAACCATCGTAGGAGCTGGAAC GACGAATATCACCGCTTCACAGGCAGGTAATAGTACTTACAACCCAGCCA GTGATGTGATACAAAGTCTGACGGTAGATAAAGCTAATTTGACAGCCACT GCAGATAATAAGAGCAAGGCGTTTGGAGAAGTTAATCCAACGTTGACAAT TTCTTATACAGGATTTGCCACTGGAGATAATGTGAGTGCCATCACTGCAC CTACTATAGCTACTACTGCTATCACTACTAGCGATGCAGGTAGTTATGGA ATCAGTTTGACTGGAGGTTCTGGTGGAGCTAACTACAACCTGACAATAGT AGATGGCGCCTTGACGATCAATAAAGCGACACAAACGATTACATTCACAA CAATAAGCAATCAAACGCTTCAGAATTCACCCATTACCCTCCAGGCCAAT GCAACCTCAGGATTGAGTGTTGTATTTACCTTGCTCGAAGGCGATGGTGT GATTTCTGGTAATGAGTTGACTTTCAACGGTGCAGGCACTTTCAAAGTAA ATGCAGCCCAATCAGGTAATACGAACTATCTGGCAGCCAATACGCTTGAA CAAACCTTTGTGGTCACAAGTCCGACCAAACAAGACCAGACGATCACCTT TGAGGCGATACCTGCTAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79271:2..970+

>mRNA_M-pyrifera_M_contig79271.18610.1 ID=mRNA_M-pyrifera_M_contig79271.18610.1|Name=mRNA_M-pyrifera_M_contig79271.18610.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1938bp|location=Sequence derived from alignment at M-pyrifera_M_contig79271:2..970+ (Macrocystis pyrifera P11B4 male)
GCGTCTTCTGGGTTAGGGATTGTTTATGTGAGTTCCAATACAGCCGTAGC
AACGGTCACTCCAACAGGTACAGTATCGATAGTAGGCGTGGGAAGTACGA
ATATCACTGCCTCACAGGCAGGAGATGGCAACTGGAATGCAGCACCCGAT
CAAATGCAATCCCTGACAGTGAATAATCTGCTGACGCAAACGATCACTTT
CAATGCGCTGAGTAATGTAACTTATGGAAGTGCGGATTTCAATCTGACAG
CCGCAGGTGGCGGATCAGGTAATGCGTTGACTTACACCAGTTCAAATACA
GCAGTAGCAACAGTATCAGGGAGCAGGGTAACCATCGTAGGAGCTGGAAC
GACGAATATCACCGCTTCACAGGCAGGTAATAGTACTTACAACCCAGCCA
GTGATGTGATACAAAGTCTGACGGTAGATAAAGCTAATTTGACAGCCACT
GCAGATAATAAGAGCAAGGCGTTTGGAGAAGTTAATCCAACGTTGACAAT
TTCTTATACAGGATTTGCCACTGGAGATAATGTGAGTGCCATCACTGCAC
CTACTATAGCTACTACTGCTATCACTACTAGCGATGCAGGTAGTTATGGA
ATCAGTTTGACTGGAGGTTCTGGTGGAGCTAACTACAACCTGACAATAGT
AGATGGCGCCTTGACGATCAATAAAGCGACACAAACGATTACATTCACAA
CAATAAGCAATCAAACGCTTCAGAATTCACCCATTACCCTCCAGGCCAAT
GCAACCTCAGGATTGAGTGTTGTATTTACCTTGCTCGAAGGCGATGGTGT
GATTTCTGGTAATGAGTTGACTTTCAACGGTGCAGGCACTTTCAAAGTAA
ATGCAGCCCAATCAGGTAATACGAACTATCTGGCAGCCAATACGCTTGAA
CAAACCTTTGTGGTCACAAGTCCGACCAAACAAGACCAGACGATCACCTT
TGAGGCGATACCTGCTAAGGCGTCTTCTGGGTTAGGGATTGTTTATGTGA
GTTCCAATACAGCCGTAGCAACGGTCACTCCAACAGGTACAGTATCGATA
GTAGGCGTGGGAAGTACGAATATCACTGCCTCACAGGCAGGAGATGGCAA
CTGGAATGCAGCACCCGATCAAATGCAATCCCTGACAGTGAATAATCTGC
TGACGCAAACGATCACTTTCAATGCGCTGAGTAATGTAACTTATGGAAGT
GCGGATTTCAATCTGACAGCCGCAGGTGGCGGATCAGGTAATGCGTTGAC
TTACACCAGTTCAAATACAGCAGTAGCAACAGTATCAGGGAGCAGGGTAA
CCATCGTAGGAGCTGGAACGACGAATATCACCGCTTCACAGGCAGGTAAT
AGTACTTACAACCCAGCCAGTGATGTGATACAAAGTCTGACGGTAGATAA
AGCTAATTTGACAGCCACTGCAGATAATAAGAGCAAGGCGTTTGGAGAAG
TTAATCCAACGTTGACAATTTCTTATACAGGATTTGCCACTGGAGATAAT
GTGAGTGCCATCACTGCACCTACTATAGCTACTACTGCTATCACTACTAG
CGATGCAGGTAGTTATGGAATCAGTTTGACTGGAGGTTCTGGTGGAGCTA
ACTACAACCTGACAATAGTAGATGGCGCCTTGACGATCAATAAAGCGACA
CAAACGATTACATTCACAACAATAAGCAATCAAACGCTTCAGAATTCACC
CATTACCCTCCAGGCCAATGCAACCTCAGGATTGAGTGTTGTATTTACCT
TGCTCGAAGGCGATGGTGTGATTTCTGGTAATGAGTTGACTTTCAACGGT
GCAGGCACTTTCAAAGTAAATGCAGCCCAATCAGGTAATACGAACTATCT
GGCAGCCAATACGCTTGAACAAACCTTTGTGGTCACAAGTCCGACCAAAC
AAGACCAGACGATCACCTTTGAGGCGATACCTGCTAAG
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