mRNA_M-pyrifera_M_contig79266.18606.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A3D1GQZ9_9GAMM (IS3 family transposase (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3D1GQZ9_9GAMM) HSP 1 Score: 365 bits (936), Expect = 7.950e-127 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS 534 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS Sbjct: 63 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS 240
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A286AJR5_9PROT (Integrase core domain-containing protein n=2 Tax=Nitrosomonas ureae TaxID=44577 RepID=A0A286AJR5_9PROT) HSP 1 Score: 293 bits (751), Expect = 6.440e-99 Identity = 139/178 (78.09%), Postives = 157/178 (88.20%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS 534 YLST+LDD+SRFI+AWRLCTTM+A DVSDTLDDAL FT LDQVKVKHKPRLLSDNGPSYI+S+LA YL+D+ M HTRG+PYHPQTQGKIERWHRSLKNQILLENYY P +L+ RI +FVDYYNHERYHESLNNLTPADV+ GRGQ +LD R++IK TLAMRR+M+YDN K MS Sbjct: 45 YLSTVLDDFSRFIIAWRLCTTMSARDVSDTLDDALRFTRLDQVKVKHKPRLLSDNGPSYISSELAHYLEDQNMTHTRGKPYHPQTQGKIERWHRSLKNQILLENYYFPDELQDRIRQFVDYYNHERYHESLNNLTPADVFNGRGQSILDERKKIKHQTLAMRRRMYYDNHAKFSNMMS 222
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A382CW00_9ZZZZ (Integrase catalytic domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382CW00_9ZZZZ) HSP 1 Score: 296 bits (758), Expect = 1.580e-98 Identity = 135/170 (79.41%), Postives = 158/170 (92.94%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQ 510 YLST+LDDYSRFI+AWRLCT+M+A DVSDTLD+AL FTG+DQV VKHKPRLLSDNGPSY+A++L YLDD+ M HTRGRPYHP TQGKIERWHRS+KNQ+LLE+YYLPGDLE+RI +FVDYYNHERYHESL+NLTPADV+YGRGQQ+L++RE+IKL TLA R++MHY NQ Sbjct: 146 YLSTVLDDYSRFIVAWRLCTSMSARDVSDTLDEALEFTGMDQVHVKHKPRLLSDNGPSYVAAELKTYLDDRDMTHTRGRPYHPMTQGKIERWHRSMKNQVLLEHYYLPGDLERRISQFVDYYNHERYHESLDNLTPADVFYGRGQQILNKRERIKLKTLAFRKQMHYRNQ 315
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A1H9E3Y7_9PROT (Transposase InsO and inactivated derivatives n=3 Tax=Nitrosomonas ureae TaxID=44577 RepID=A0A1H9E3Y7_9PROT) HSP 1 Score: 293 bits (751), Expect = 2.600e-97 Identity = 139/178 (78.09%), Postives = 157/178 (88.20%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS 534 YLST+LDD+SRFI+AWRLCTTM+A DVSDTLDDAL FT LDQVKVKHKPRLLSDNGPSYI+S+LA YL+D+ M HTRG+PYHPQTQGKIERWHRSLKNQILLENYY P +L+ RI +FVDYYNHERYHESLNNLTPADV+ GRGQ +LD R++IK TLAMRR+M+YDN K MS Sbjct: 156 YLSTVLDDFSRFIIAWRLCTTMSARDVSDTLDDALRFTRLDQVKVKHKPRLLSDNGPSYISSELAHYLEDQNMTHTRGKPYHPQTQGKIERWHRSLKNQILLENYYFPDELQDRIRQFVDYYNHERYHESLNNLTPADVFNGRGQSILDERKKIKHQTLAMRRRMYYDNHAKFSNMMS 333
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: E7C8C6_9GAMM (Transposase and inactivated derivatives n=1 Tax=uncultured Oceanospirillales bacterium HF4000_21D01 TaxID=723624 RepID=E7C8C6_9GAMM) HSP 1 Score: 293 bits (751), Expect = 2.600e-97 Identity = 134/178 (75.28%), Postives = 164/178 (92.13%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS 534 YLSTILDD+SR+I+AWRLCT+M++SDVSDTLDDALSFTGLDQV+++HKPRLLSDNGP YI+ +L+DYL+ KGM HTRGRPYHPQTQGKIERWHRS+KN+ILL YY P +L++++ FV+YY+HERYHESL+NLTPADVYYGRGQ++L++RE IKLNTLAMRR++HYD Q KL T+MS Sbjct: 156 YLSTILDDFSRYIIAWRLCTSMSSSDVSDTLDDALSFTGLDQVQMRHKPRLLSDNGPCYISGELSDYLEAKGMTHTRGRPYHPQTQGKIERWHRSMKNKILLNKYYFPSELQEQLQRFVNYYDHERYHESLDNLTPADVYYGRGQEILEQRENIKLNTLAMRRQLHYDRQSKLVTQMS 333
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A2E7TAA5_9GAMM (IS3 family transposase n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A2E7TAA5_9GAMM) HSP 1 Score: 297 bits (760), Expect = 4.450e-97 Identity = 136/173 (78.61%), Postives = 158/173 (91.33%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKL 519 YLSTILDDYSRFI+AWRLCT+M+ASDV+DTLDDAL FTGLD+VKV+HKPRLLSDNGP YI+ +L+ YL + GM HTRGRPYHPQTQGKIERWHRS+KNQILL NYYLPG+L++ + F+ YYNHERYHESL+NLTPADVYYGRGQ++LD+RE +KLNTLAMRRKMHYDN+ L Sbjct: 276 YLSTILDDYSRFIVAWRLCTSMSASDVADTLDDALCFTGLDRVKVRHKPRLLSDNGPCYISGELSGYLQENGMTHTRGRPYHPQTQGKIERWHRSMKNQILLNNYYLPGELQEHLQRFITYYNHERYHESLDNLTPADVYYGRGQEILDQRETVKLNTLAMRRKMHYDNRNNL 448
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A1H2GV49_9PROT (Integrase core domain-containing protein n=2 Tax=Nitrosomonas ureae TaxID=44577 RepID=A0A1H2GV49_9PROT) HSP 1 Score: 284 bits (727), Expect = 1.990e-95 Identity = 135/178 (75.84%), Postives = 156/178 (87.64%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS 534 YLST+LDDYSRFI+AWRLC TM+A DVSDTLDDAL FTGLDQVK+KHK RLLSDNGPSYI+S+LA YL+ + M HTRG+PYHPQTQGKIERWHRSLKNQILLEN+Y PG+L+ RI +FVDYYNHERYHESLNNLTPADV+YGRGQ +L+ RE+IK TLA RR+M+Y +Q+ MS Sbjct: 34 YLSTVLDDYSRFIIAWRLCVTMSAYDVSDTLDDALRFTGLDQVKIKHKLRLLSDNGPSYISSELAHYLEKQNMAHTRGKPYHPQTQGKIERWHRSLKNQILLENFYFPGELQDRIRQFVDYYNHERYHESLNNLTPADVFYGRGQFILEEREKIKQRTLATRRQMYYASQLNNSNLMS 211
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A7Z9QLZ7_9GAMM (IS3 family transposase n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7Z9QLZ7_9GAMM) HSP 1 Score: 292 bits (747), Expect = 3.330e-95 Identity = 138/176 (78.41%), Postives = 157/176 (89.20%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTR 528 YLST+LDDYSRFI+AWRLCT+M+ASDVSDTLDDA +FT +DQVKVKHKPRLLSDNGP YIA +L+DYL GM HTRGRPYHPQTQGKIERWHRS+KNQILLENYYLPG+L+ + +FVDYYNHERYHESL NLTPADV+YGRGQ++LD+R+ IK TLA RRKMHYDNQ + TR Sbjct: 270 YLSTVLDDYSRFIVAWRLCTSMSASDVSDTLDDARAFTDIDQVKVKHKPRLLSDNGPCYIAGELSDYLAKHGMTHTRGRPYHPQTQGKIERWHRSMKNQILLENYYLPGELKIALQQFVDYYNHERYHESLKNLTPADVFYGRGQEILDQRQLIKQATLAARRKMHYDNQTRRLTR 445
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: A0A382F2F6_9ZZZZ (Integrase catalytic domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382F2F6_9ZZZZ) HSP 1 Score: 285 bits (728), Expect = 3.710e-94 Identity = 133/170 (78.24%), Postives = 152/170 (89.41%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQ 510 YLST+LDDYSRFI+AWRLC +M+A DVS+TLDDA FTG+DQVKVKH+PRLLSDNGP YIA +L+DYL GM HTRGRPYHPQTQGKIERWHRS+KNQILLENYYLPG+L+ + +FVDYYNHERYHESL NLTPADV+YGRGQ++LD+RE+IKL TL MRR MHY NQ Sbjct: 134 YLSTVLDDYSRFIVAWRLCASMSALDVSNTLDDARVFTGIDQVKVKHRPRLLSDNGPCYIAGELSDYLAGHGMTHTRGRPYHPQTQGKIERWHRSMKNQILLENYYLPGELKAALQKFVDYYNHERYHESLKNLTPADVFYGRGQEILDQREKIKLATLMMRRNMHYYNQ 303
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Match: UPI000D6E35DC (IS3 family transposase n=1 Tax=Marinicella sediminis TaxID=1792834 RepID=UPI000D6E35DC) HSP 1 Score: 287 bits (734), Expect = 3.640e-93 Identity = 135/178 (75.84%), Postives = 158/178 (88.76%), Query Frame = 1 Query: 1 YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRLLSDNGPSYIASDLADYLDDKGMDHTRGRPYHPQTQGKIERWHRSLKNQILLENYYLPGDLEQRIGEFVDYYNHERYHESLNNLTPADVYYGRGQQVLDRREQIKLNTLAMRRKMHYDNQMKLQTRMS 534 YLSTILDDYSRFI+AWRLCTTMAASDV+DTLDDAL+FTGLDQV V HKPRLLSDNGP YI+ LADYL D+GM HTRGRPYHPQTQGKIERWHRS+KNQILL++YYLP +L+ ++ FV YYNHERYHESL+NLTPADVYYGRGQ+VL +R+ IK NT+A+RR++H+DN K+ +S Sbjct: 274 YLSTILDDYSRFIVAWRLCTTMAASDVTDTLDDALAFTGLDQVHVDHKPRLLSDNGPCYISGQLADYLKDQGMSHTRGRPYHPQTQGKIERWHRSMKNQILLDHYYLPSELKNQMQRFVQYYNHERYHESLDNLTPADVYYGRGQEVLKQRKLIKQNTIALRRQLHHDNLNKVNQSVS 451 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79266.18606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79266.18606.1 >prot_M-pyrifera_M_contig79266.18606.1 ID=prot_M-pyrifera_M_contig79266.18606.1|Name=mRNA_M-pyrifera_M_contig79266.18606.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp YLSTILDDYSRFILAWRLCTTMAASDVSDTLDDALSFTGLDQVKVKHKPRback to top mRNA from alignment at M-pyrifera_M_contig79266:2..538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79266.18606.1 ID=mRNA_M-pyrifera_M_contig79266.18606.1|Name=mRNA_M-pyrifera_M_contig79266.18606.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig79266:2..538+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79266:2..538+ >mRNA_M-pyrifera_M_contig79266.18606.1 ID=mRNA_M-pyrifera_M_contig79266.18606.1|Name=mRNA_M-pyrifera_M_contig79266.18606.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig79266:2..538+ (Macrocystis pyrifera P11B4 male)back to top |