mRNA_M-pyrifera_M_contig79234.18601.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A2D9CK38_9BACT (Cytochrome c oxidase subunit 2 n=3 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CK38_9BACT) HSP 1 Score: 345 bits (886), Expect = 4.400e-115 Identity = 164/291 (56.36%), Postives = 216/291 (74.23%), Query Frame = 1 Query: 4 DSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGV--VTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADD--------LSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPAGATSDEA----NEADEAAGS 834 D+A+EL+I KW+W ATYPNG S ETQPLSY+++ + GV VT+G +YPIFY+PE+TDV+L+M S DVIHSFWIP+FRTK DV+PNRYTG+G +TPKLT D ++ M+ RDMWIFCAEYCGDEHSRMAATLR+VP ++Y+ K+ EW V+L P E G +++N +C+SCH + GP + ++G +FGYGYDV L DG+T PRD NYYR SI+DPNA +VAG+ P M ++ QLS++ ID +IAYI++LSDRG PA A +E ++A+EAAGS Sbjct: 111 DNALELRITGMKWSWIATYPNGGQSNETQPLSYNKETLDGVEVVTQGREYPIFYLPENTDVKLRMQSTDVIHSFWIPEFRTKRDVIPNRYTGFGIKTPKLTKYDSYIYRDKETGEETEMLGRDMWIFCAEYCGDEHSRMAATLRIVPQEIYEQKMAEWGVQLSPIETGEKIYNQICMSCHAIDGTKLVGPPWNSATLDGHEFGYGYDVTLEDGSTHPRDANYYRESILDPNAKIVAGYAPAMASYQGQLSDEQIDGLIAYIQSLSDRG-PAPAEGEETEAGTDQAEEAAGS 400
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A812Y1Q0_9DINO (CtaD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Y1Q0_9DINO) HSP 1 Score: 312 bits (800), Expect = 1.260e-93 Identity = 151/287 (52.61%), Postives = 193/287 (67.25%), Query Frame = 1 Query: 1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLT-------ADDLSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPAGATSDEANEADEAAGSNP 840 P AMELK+DAWKWAW+ TYPNGA+SPET+ LSY E + ++ GL+YPIFY+PEDT+V+L+M S DVIHSFWIP+FRTKMDV+PNRYTGYGF+TP+L DD + RDMWIFCAEYCGDEHSRMAATLR+VP ++Y K+ W P G L+ TMC CH++ TGPT Q+ DGT RD NY R SI+DPNA +V+G+ P M +F QLS+ DID +IA+I++LSD+ A + ++ +AD++AGS P Sbjct: 1875 PTDAMELKVDAWKWAWKVTYPNGASSPETKFLSYQETDIG--ISSGLEYPIFYVPEDTEVKLRMHSQDVIHSFWIPEFRTKMDVIPNRYTGYGFKTPELRDSDTVIQVDDQGISSEIPGRDMWIFCAEYCGDEHSRMAATLRIVPREIYDEKIKFWGTPKDPKVLGETLWKTMCAICHSIDGSPGTGPTWGTXXXXXXXXM----AQMDDGTEMMRDANYIRESILDPNAHIVSGYAPAMPSFQGQLSDTDIDGLIAFIQSLSDKNPNADESGEDNQQADDSAGSPP 2155
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A3M2CIP3_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CIP3_9BACT) HSP 1 Score: 265 bits (678), Expect = 7.090e-84 Identity = 140/269 (52.04%), Postives = 170/269 (63.20%), Query Frame = 1 Query: 1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTM----IARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG-NPAGA 792 P A+EL++ AWKW W TYPNGA SPET+ L E+ G V G YPIFY+PE+T V L+M S DVIH+FWIPDFRTKMDV PNR+TGY F TP L ++ D T+ RDMW+FCAEYCGDEHSRMAAT+RVVP +Y+ KL EW P E G Q+ C CH+V+ TGPT D YG ++DG+T +DDNY R SI P A +VAG+ M +F QL E +D IIAY+KTLS PAG+ Sbjct: 105 PTGALELRVSAWKWGWAITYPNGAQSPETKFL---EESADGTVV-GNKYPIFYVPENTAVSLRMSSQDVIHAFWIPDFRTKMDVYPNRFTGYTFHTPTLGLEEEVFDETVGQNIPGRDMWVFCAEYCGDEHSRMAATIRVVPQFIYEQKLAEWNAPKDPVELGKQIHEGRCAICHSVNGTPGTGPTWK-------DL-YGSQGLMSDGSTVLKDDNYIRESIYIPAAKIVAGYAGNMPSFQGQLDETQLDGIIAYMKTLSQHAPQPAGS 361
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7Y5VXA9_9BACT (Cytochrome c oxidase subunit II n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5VXA9_9BACT) HSP 1 Score: 220 bits (560), Expect = 2.210e-66 Identity = 114/266 (42.86%), Postives = 152/266 (57.14%), Query Frame = 1 Query: 1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTMIA---RDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWA-VELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPA 786 P A+E+ + A KW WR YPNGA S E + L + PIFY+P +T V+L+MVS DV+HSFW+PDFR K DVMPNRYT YGF + + + + G +D W+FCAEYCGD HS MAA +R+VP + + +D W+ L P EKG +L+ C SCH++ +TGP+ +G TDGT+ DD Y R SI +P +VAG+ P M +F LSE D+ AII Y+KT+S PA Sbjct: 115 PAGAIEMDVRAAKWDWRIIYPNGAESTEREKLG-----------SAKEIPIFYMPAETPVKLRMVSNDVLHSFWVPDFRGKFDVMPNRYTYYGFTSGPIKGEKKLEAGPFAGTPYQDHWLFCAEYCGDSHSEMAAVVRMVPRETWAKIVDSWSGAGLTPVEKGKRLYTIQCASCHSIDGSKNTGPSWKD--------AFGKTETFTDGTSGVVDDAYVRESIYEPAKKLVAGYGPQMASFKGILSEDDVAAIIEYMKTISVNHKPA 361
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7D8UH07_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7D8UH07_9BACT) HSP 1 Score: 211 bits (536), Expect = 4.420e-62 Identity = 119/278 (42.81%), Postives = 156/278 (56.12%), Query Frame = 1 Query: 10 AMELKIDAWKWAWRATYPNGATSPE-TQPLSYHE---------DPVT------GVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADD--LSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAV--ELPPAEKGAQLFNTM--CVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG 777 AME ++A+ W W TYPNG S E T+ L + D T G ++YPIFY+PED +RL+M S DVIHSFW+PDFR K DV PNRYT Y FRT +L+ +D L + RD I+CAEYCGD HS M A LRVV Y + + E P + Q+ + C +CH+V +TGPT YGYDVQLT G + P D NY R SI++P A++ AG+ M ++ SE+ ++ IIAYI++LSDRG Sbjct: 110 AMEYSLEAYTWGWDLTYPNGIQSAEATRILDVSQRRAAIPMPGDTPTVDLEAGGPSATSMEYPIFYVPEDQPIRLRMTSRDVIHSFWVPDFRVKFDVFPNRYTSYWFRTDRLSQNDPVLPETNGQRYRDHIIYCAEYCGDFHSEMLAILRVVSRQYYAEWVQSGGIDEENTPLPELGQIISRRSGCFACHSVDGSRNTGPT--------WQNAYGYDVQLTTGESVPYDANYIRRSIVEPAAEIHAGYPNQMPSYAGVFSERQMNGIIAYIQSLSDRG 379
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7L9BPE0_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7L9BPE0_9BACT) HSP 1 Score: 205 bits (522), Expect = 3.250e-60 Identity = 113/264 (42.80%), Postives = 152/264 (57.58%), Query Frame = 1 Query: 13 MELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADD-----------LSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAV-ELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLS 768 +++ + AWKW W+ TYPNGA S E S+ V G + D P+FY PE T VR++M+S DV+HSFW+PDFR K+DVMP RYT Y F + + A LS D T + D W+FCAEYCGD+HS MAA +R+VP + + L++ V LPP E G + C +CHT+ + TGPT D YG Q TDGT++ DD+Y R S+ P + GF M F L EKD+ AIIA++K++S Sbjct: 134 IDVDLTAWKWNWKVTYPNGAESRE----SWSPTEVKGF--QATDTPVFYFPEKTPVRMRMISQDVMHSFWVPDFRYKVDVMPKRYTRYWFESEAIDASKWKRVLPAAESGLSKDYTCV--DHWVFCAEYCGDQHSEMAAIIRIVPQEAFDEWLEKNGVGALPPVELGRLRWEQNCKACHTIDGKQGTGPTWK-------DL-YGSTRQFTDGTSQLADDDYIRESMYYPARKISQGFANQMQVFA--LPEKDVQAIIAFMKSIS 379
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7Y5W9Y8_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5W9Y8_9BACT) HSP 1 Score: 200 bits (508), Expect = 1.530e-58 Identity = 112/275 (40.73%), Postives = 154/275 (56.00%), Query Frame = 1 Query: 1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTAD--------DLSDDGTMIA---RDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEW-----AVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG 777 P A+EL + A+KW W YPNG+ S E+ + PV PIFY+P D ++L+M S DV+H+FW+PDFR K D+MPNRYT F T L AD L++ M D W+FCAEYCG+EHS MAA +RVVP D K ++W L P + G ++ C SCHT+ TGPT +N +GY+ + TDG+T D+N R SI+ P +V G+ MT+F Q+ + +++AI AY+K+LSDRG Sbjct: 119 PGDAIELSVSAYKWNWDLEYPNGSQSRESTTIGSR--PV----------PIFYMPADRPIKLRMNSRDVMHAFWVPDFRIKADIMPNRYTSVWFNT-SLPADAATLGEAHGLNESSPMWGVPYSDHWVFCAEYCGNEHSEMAAVIRVVPED----KWNQWLGTIGTAGLSPIDLGKFIYQRKCASCHTIDGSKGTGPTW----LNK----WGYESKYTDGSTAIMDENSARESILVPAKKIVEGYSNQMTSFQGQIKDNELEAIFAYMKSLSDRG 368
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A2E2N883_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N883_9BACT) HSP 1 Score: 201 bits (511), Expect = 2.670e-58 Identity = 117/277 (42.24%), Postives = 158/277 (57.04%), Query Frame = 1 Query: 10 AMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGL-DYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNP------AGATSDEANEAD 819 A EL I A KW+W Y NGA++ P DPVTG VTK + D P+ +PED+++RL M S DVIHSFWIPD R K DV PNRYTGY FRTPKL + +D W+FCAEYCGD+H MAA LRV+P + + W+ L +K AQ+ C +CH+V + GPT + F + +D+NY R SI++PNA +V+G + MT++ LSE ++DA++ YI+ LSD G AG EA++A+ Sbjct: 139 AYELAIKAKKWSWTPVYHNGASTQWFLPTDETVDPVTGDVTKTIVDSPVIVVPEDSNIRLTMSSTDVIHSFWIPDLRIKGDVFPNRYTGYTFRTPKL-------EPGQPYQDHWVFCAEYCGDQHGAMAAVLRVMPSADFDQTVSGWSGALT-GDKVAQVQG--CFTCHSVDGTNMAGPTWLGLYGSSGTFDNAPPIDF-------KDENYIRESILNPNAKLVSG-RAGMTSYDGLLSEAELDALVFYIRGLSDAGQKVNEELEAGGDGGEASDAE 397
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A6N2ES79_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6N2ES79_9BACT) HSP 1 Score: 192 bits (489), Expect = 1.320e-55 Identity = 106/275 (38.55%), Postives = 161/275 (58.55%), Query Frame = 1 Query: 1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSD-DGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKL-DEWAVELPPAEKGAQLFNTM-CVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG-NPAGATSDEANE 813 P A+ L + ++W W YP G TS ET P G ++ P+F PEDT + L+M S DVIHSFW+PDFR+KMD+ PNR T + FRT KL D+ + D ++ ++CAEYCGD+HS+M +RVVP +VY+ L + W + EKG L + C +CH++ TGPT L++ YGY+ + TDG+T D ++ R SI P + +G+Q VM ++ Q++E+++ A+IA+++++SD+G +P DE E Sbjct: 118 PSDAVRLDLIGYRWGWNLYYPGGVTSTETLP--------PGTISAS-SVPVFMFPEDTPILLEMSSQDVIHSFWVPDFRSKMDLFPNRSTSFWFRTSKLQPGDMDNPDLGYPNKEHILYCAEYCGDQHSQMLGLIRVVPREVYENFLRNPWPEGISLVEKGKLLHSLRGCNACHSLDGSSGTGPTW-------LNW-YGYEHRYTDGSTHLADADFTRESIYYPGRKIRSGYQNVMNSYLGQINEEEMRALIAFMRSISDQGGDPTAGFPDEEEE 375
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A5M4D356_9CYAN (Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D356_9CYAN) HSP 1 Score: 188 bits (478), Expect = 6.300e-54 Identity = 113/265 (42.64%), Postives = 142/265 (53.58%), Query Frame = 1 Query: 1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQL-FNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQ-PVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPAG 789 P A++L + KW W TYPNG S + P+ T K IF +PEDT ++L M S+DVIHSFW+PD+RTKMD+ PN+YT Y F T KL +D+ T RD WIFCAEYCGD+HS M RVV D YQ L +W+ E QL + C+SCHTV GPT +G L G D+NY R SI+ P A GFQ VMT F LS+++I +I Y K+LS + PAG Sbjct: 128 PTDAIQLNVSGMKWDWNITYPNGEKSAYSLPMG------TKKAVK-----IFVLPEDTSIQLLMQSSDVIHSFWVPDYRTKMDLYPNQYTTYTFHTEKL-----NDEETY--RDHWIFCAEYCGDQHSEMYGIFRVVRADDYQKILTDWSAGALSCEDLGQLVYRNNCISCHTVDGNPGIGPTWLGS--------FGATRALEGGGQVVVDENYIRESILYPQAKRADGFQGQVMTPFLGLLSDEEIAGVICYFKSLSSQ--PAG 364 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79234.18601.1 >prot_M-pyrifera_M_contig79234.18601.1 ID=prot_M-pyrifera_M_contig79234.18601.1|Name=mRNA_M-pyrifera_M_contig79234.18601.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=277bp MELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIback to top mRNA from alignment at M-pyrifera_M_contig79234:5..847+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79234.18601.1 ID=mRNA_M-pyrifera_M_contig79234.18601.1|Name=mRNA_M-pyrifera_M_contig79234.18601.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig79234:5..847+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79234:5..847+ >mRNA_M-pyrifera_M_contig79234.18601.1 ID=mRNA_M-pyrifera_M_contig79234.18601.1|Name=mRNA_M-pyrifera_M_contig79234.18601.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1662bp|location=Sequence derived from alignment at M-pyrifera_M_contig79234:5..847+ (Macrocystis pyrifera P11B4 male)back to top |