prot_M-pyrifera_M_contig792.18592.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig792.18592.1
Unique Nameprot_M-pyrifera_M_contig792.18592.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length63
Homology
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BLAST of mRNA_M-pyrifera_M_contig792.18592.1 vs. uniprot
Match: D7FYZ2_ECTSI (GBBH-like_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ2_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.990e-20
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0 
Query:    4 VDYTDVLESDRSVQIQWEDGRTSHYDFTWLRVNCPSCLHESGQRTVFPGDVRADLKP 60
            V  T VL ++R V++ W+DG  S++D+TWLRVNCPS LHESGQRTVFPGDV   LKP
Sbjct:   80 VSSTQVLANERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTVFPGDVDPGLKP 136
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BLAST of mRNA_M-pyrifera_M_contig792.18592.1 vs. uniprot
Match: A0A6H5KBM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.220e-19
Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:    4 VDYTDVLESDRSVQIQWEDGRTSHYDFTWLRVNCPSCLHESGQRTVFPGDVRADLKP 60
            V  T+VL S+R V++ W+DG  S++D+TWLRVNCPS LHESGQRT+FPGDV   LKP
Sbjct:   78 VSSTEVLPSERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTLFPGDVDPGLKP 134
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BLAST of mRNA_M-pyrifera_M_contig792.18592.1 vs. uniprot
Match: UPI00097D6471 (gamma-butyrobetaine dioxygenase n=1 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097D6471)

HSP 1 Score: 48.1 bits (113), Expect = 8.480e-5
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0 
Query:    3 AVDYTDVLESDRSVQIQWEDGRTSHYDFTWLRVNC--PSCLHESGQ 46
            +V +   LE  R V+++W+DG TS Y FTWLR NC  P C  +S Q
Sbjct:   65 SVRHARALEEARMVEVEWDDGGTSLYPFTWLRDNCQCPLCTLQSAQ 110
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig792.18592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYZ2_ECTSI1.990e-2064.91GBBH-like_N domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KBM7_9PHAE6.220e-1964.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00097D64718.480e-547.83gamma-butyrobetaine dioxygenase n=1 Tax=Paralichth... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038492GBBH-like, N-terminal domain superfamilyGENE3D3.30.2020.30coord: 1..63
e-value: 3.4E-9
score: 38.6
IPR010376Gamma-butyrobetaine hydroxylase-like, N-terminalPFAMPF06155DUF971coord: 11..62
e-value: 3.5E-10
score: 40.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig792contigM-pyrifera_M_contig792:99..287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig792.18592.1mRNA_M-pyrifera_M_contig792.18592.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig792 99..287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig792.18592.1 ID=prot_M-pyrifera_M_contig792.18592.1|Name=mRNA_M-pyrifera_M_contig792.18592.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp
AAAVDYTDVLESDRSVQIQWEDGRTSHYDFTWLRVNCPSCLHESGQRTVF
PGDVRADLKPTAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038492GBBH-like_N_sf
IPR010376GBH-like_N