prot_M-pyrifera_M_contig79179.18589.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79179.18589.1
Unique Nameprot_M-pyrifera_M_contig79179.18589.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length256
Homology
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: A0A7S1CTU9_9STRA (Choline transporter-like protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CTU9_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.450e-37
Identity = 88/249 (35.34%), Postives = 133/249 (53.41%), Query Frame = 0
Query:   10 VYPRTVEDFILNA-------AKTDPTEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSV----------KRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKYEIEVDSTEN--CTYPSY---EDIGMVLSADD----PACLVKETKTESDTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTTVXXXXXXXXXXXXYTYWLGGAIDP 232
            VYPRT ED +LN        A  +P +++FYGICV+KCP   +VVCN     G+++++          ++  + A   G N+    C+ +  NCWV   DQ    +RCVPKY + VD  +   C +P     E+ G    + D      CL+    ++ DT  P QPN+LF+++NSAQA+WG +F DL RA WV+L+  +V+ L++ F++L  L+  TGCMVWT +            + Y   G + P
Sbjct:   42 VYPRTNEDLLLNMQGGKMNFANMNPLDFKFYGICVEKCPLSREVVCN----YGITENIGAWVDADTAEEKNTVLANCWG-NDDPDYCQSVLDNCWVSPADQASTMYRCVPKYVV-VDHADQPKCLFPENWDEENPGKNPVSSDGLSVTGCLIVNITSQKDTVKPAQPNILFDKINSAQALWGRWFGDLQRAWWVVLLGGVVVALVVSFLYLIFLKNCTGCMVWTAIILTILLSFVITIFLYAKAGILTP 284          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: A0A813CX50_9DINO (Slc44a2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CX50_9DINO)

HSP 1 Score: 103 bits (257), Expect = 1.930e-21
Identity = 60/179 (33.52%), Postives = 85/179 (47.49%), Query Frame = 0
Query:   27 PTEYEFYGICVDKCP-----KQGDVVCNDEGPSGVS-DSVKRECIWAPVTG------------YNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKYEIEVDSTENCTYPSYEDIGMVLSADDPACLVKETKTESDTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGL 187
            P +Y FYGICV +C      K   VVCND+  S  +     +  +    TG             N ++V C  I  NCW++    + +  RC+P YE++ ++T  C YP     G  L   D  C++    +    + P   ++LF+QLN A   WG Y  DL    WVI VCS+VIGL
Sbjct:   59 PQDYSFYGICVSECNTKETGKNIVVVCNDQYKSVNNFQGADQAALLDSSTGCFGSVDPADSNTINGASVRCSTIYANCWIVPVYTSSILRRCIPVYEVDNNATSTCAYPVGN--GTTLEPTDSRCVLVTESSTGTVTRPRDSSILFDQLNDASQTWGRYINDLRHTWWVIAVCSVVIGL 235          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: K3WKP3_GLOUD (Choline transporter-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKP3_GLOUD)

HSP 1 Score: 90.1 bits (222), Expect = 7.770e-17
Identity = 74/250 (29.60%), Postives = 100/250 (40.00%), Query Frame = 0
Query:    9 TVYPRTVEDFI--LNAAKTDPTEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVP-KYEIEVDSTENCTYPSYED-----IGMVLSADDPACLVKETKTESDTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTTVXXXXXXXXXXXXYTYWLGGAIDPPSVASLS--ESQTSSGSS 248
            T YPR  +D +  L A   D T  +F+G+CV  CP  G   C                       Y+NS+         CWV  QD   V FRC+P   + E    + C  P   D        V       C  K  +           N L EQL     + G +  D++ A W+IL+   V  ++LG +WL +LQ F GCMVW T             +  +  G ID  +++ LS  ES TSS SS
Sbjct:   89 TAYPRLDQDLLVALTAGVNDITAMQFFGVCVASCPMAGATTCT----------------------YDNSS---------CWVAAQDSRAVLFRCIPVDSQNETVLAQTCVDPVGADPECTNAKFVHGECSQVCHTKRVQKSVWEVEATTLNPLMEQLQGNLQVLGRFLNDMSAAKWLILLAGGVGAMVLGLVWLLVLQFFAGCMVWLTCFLVLIALVLMSLFCSFRAGIIDADALSGLSFLESATSSDSS 307          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: W2RB52_PHYPN (Choline transporter-like protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RB52_PHYPN)

HSP 1 Score: 81.6 bits (200), Expect = 5.980e-14
Identity = 62/214 (28.97%), Postives = 87/214 (40.65%), Query Frame = 0
Query:    8 YTVYPRTVEDFILNAAK-TDPTEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKY--------EIEVD---STENCTYPSYEDIGMVLSADDPACLVKETKTES-DTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTT 208
            +T YPR  ED ++ AA    P+  +F+G+CV+ CP  G   C                       Y N           CWV+ QD     FRC+P          E+ +D   +  NCT   YE         D  C  K +  E  +  A    + L  QL     + G +  D+  A  V+L+   +  LILG +WL +LQ F GC+VW T
Sbjct:   84 FTTYPRLNEDLLIAAANGVSPSNAKFFGVCVESCPTAGSKTCT----------------------YGNET---------CWVVAQDTESAFFRCLPVVSTNETVLDEVCIDPKGADPNCTVDLYE-----AGECDTICNTKRSHKEVWEVEATGGTSPLLSQLQGNLQVLGRFLNDMYAARSVVLLVGGLGALILGMLWLIVLQFFAGCVVWLT 261          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: A0A329SG68_9STRA (Choline transporter-like protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SG68_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.450e-13
Identity = 63/220 (28.64%), Postives = 88/220 (40.00%), Query Frame = 0
Query:    2 DRSEEPYTVYPRTVEDFILNAAK-TDPTEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKY--------EIEVD---STENCTYPSYEDIGMVLSADDPACLVKETKTES-DTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTT 208
            D S   +T YPR  ED ++ AA    P   +F+G+CV+KCP  G   C   G +                               CWV+ QD     FRC+P          E+ +D   +  +CT   YE         D  C  K    E  +  A    + L  QL     + G +  D+  A  V+L+   +  LILG +WL +LQ F GC+VW T
Sbjct:   32 DYSNARFTTYPRLNEDLLVAAASGVSPANAKFFGVCVEKCPTAGSKTCTYGGET-------------------------------CWVVAQDTELAFFRCLPVASTNETVLEEVCIDPEGADPSCTVDRYE-----AGKCDTVCNTKRAHKEVWEVEATGGTSPLLSQLQGNLQVLGRFLNDMYAARSVVLLIGGLGALILGMMWLIVLQFFAGCVVWLT 215          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: A0A6A3PAY2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3PAY2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.650e-13
Identity = 63/217 (29.03%), Postives = 87/217 (40.09%), Query Frame = 0
Query:    8 YTVYPRTVEDFILNAAK-TDPTEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKYEIEVDSTENCTYPSYEDIGMVLSADDPACLV---------------KETKTESDTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTT 208
            +T YPR  ED ++ AAK   P   +F+G+CV+ CP  G  +C                       Y N           CWV+ QD     FRC+P     V ST        E+I +     DPAC V               +  K   +  A    + L  QL     + G +  D+  A  V+L+   +  LILG +WL +LQ F GC+VW T
Sbjct:  533 FTTYPRLNEDLLVAAAKGVSPANAKFFGVCVESCPMAGSKICT----------------------YGNET---------CWVVAQDTEAAFFRCLP-----VASTNETIL---EEICIDPEGADPACTVDLFEAGKCDIVCNTKRAHKEVWEVEATGGTSPLLSQLQGNLQVLGRFLNDMYAARSVVLLFGGLGALILGILWLIVLQFFAGCVVWLT 710          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: D0NFW4_PHYIT (Choline transporter-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFW4_PHYIT)

HSP 1 Score: 78.2 bits (191), Expect = 8.830e-13
Identity = 60/215 (27.91%), Postives = 86/215 (40.00%), Query Frame = 0
Query:    8 YTVYPRTVEDFILNAAK-TDPTEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKY--------EIEVD---STENCTYPSYE--DIGMVLSADDPACLVKETKTESDTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTT 208
            +T YPR  ED ++ AA    PT  +F+G+CV+ CP  G   C   G                                 CWV+ Q+  P   RC+P          E+ +D   +  NCT   YE  +   + +       V E +    TS       L  QL     + G +  D+  A  V+L+   +  LILG +WL +LQ F GC+VW T
Sbjct:   85 FTTYPRRNEDLLVAAANGVSPTNAKFFGVCVESCPSAGSKTCTYGGEM-------------------------------CWVVAQETEPALCRCLPVIVSNETVLEEVCIDPEGADSNCTVHRYEAGECNAICNTKRAHKEVWEVEATGGTSP------LLSQLQGNLQVLGRFLNDMYAARSVVLLVGGLGALILGLLWLVVLQFFAGCVVWLT 262          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: G4Z136_PHYSP (Choline transporter-like protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z136_PHYSP)

HSP 1 Score: 75.9 bits (185), Expect = 5.480e-12
Identity = 60/217 (27.65%), Postives = 84/217 (38.71%), Query Frame = 0
Query:    8 YTVYPRTVEDFILNAAK-TDPTEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKYEIEVDSTENCTYPSYEDIGMVLSADDPACLV---------------KETKTESDTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTT 208
            +T YPR  ED ++ AA    P   +F+G+CV+ CP  G   C                       Y N           CW + QD     FRC+P     V ST        E++ +     DPAC V               +  K   +  A    + L  QL     + G +  D+  A  V+L+   +  LILG +WL +LQ F GC+VW T
Sbjct:   85 FTTYPRLNEDLLVAAANGVSPANAKFFGVCVESCPMAGSKTCT----------------------YGNET---------CWTVAQDTEAAFFRCLP-----VASTNETIL---EEVCIDPEGADPACTVDLFEAGKCATVCNTKRAHKEVWEVEATGGTSPLLSQLQGNLQVLGRFLNDMYAARSVVLLVGGLGALILGILWLIVLQFFAGCVVWLT 262          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: A0A662XQY3_9STRA (Choline transporter-like protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQY3_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.950e-11
Identity = 57/209 (27.27%), Postives = 82/209 (39.23%), Query Frame = 0
Query:    8 YTVYPRTVEDFILNAAKTDP-TEYEFYGICVDKCPKQGDVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKYEI-EVDSTENCTYPSYEDIGMVLSADDPA-----CLVKETKTESDT-SAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTT 208
            +T YPR  E+ +  A    P T+ +F+G+CV  CP  G   C                       Y N           CWV+ QD     FRC+P     E    E C  P   D    ++ ++       C  K  + +  T  A    + L  QL     + G + +D+  A  V+L       L+LG +WL +LQ F GC+VW T
Sbjct:   28 FTTYPRLNENLLAAAVSGVPATKAQFFGVCVASCPMAGSKTCT----------------------YGNET---------CWVVAQDTESAFFRCLPVASTNETVLAEVCLDPVGADPSCTVALNETGKCGVVCNTKRVRKDVWTVEATGGTSPLLNQLQGYLQVLGRFLSDMYAARTVVLXXXXXXXLLLGVVWLLVLQFFAGCVVWLT 205          
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Match: A0A6G0XXS9_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXS9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.720e-6
Identity = 57/234 (24.36%), Postives = 93/234 (39.74%), Query Frame = 0
Query:    8 YTVYPRTVEDFILNAAKTDP--------TEYEFYGICVDKCPKQG-------------------DVVCNDEGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRCVPKYEIEVDST---ENCTYPSYEDIGMV--LSADDPACLVKETKTESDTSAPPQPNLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKFTGCMVWTTV 209
            Y  YPR  +D  LNA   DP           + YG+CV  CP                      DVV     P    +       +  V   +N    C ++ T   +        S RCV       +++    N T+ +    G     S + P+C+  +TK E+  ++    + +F+ L S   +   +  D+ +A+  IL+C +++ L+LGF+WL  L+   G  VW TV
Sbjct:   99 YLAYPRLAQD--LNAMAVDPKFDPKDPANLKKLYGVCVAACPSSHSANGTQQYIHALQTYAAGQDVVAAASQPYASGEDTTSGSPFKIVVNTSNVLFRCLELPTTSQIN-------SVRCVDDCVAGSNASMCGPNATFFNCGAAGCTKYASVNMPSCMNLQTKQETLKTSSSNSSPIFDSLYSGWFMVAQWIGDVQKASIPILICGVLVSLVLGFLWLLCLRYCAGFFVWLTV 323          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79179.18589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A7S1CTU9_9STRA1.450e-3735.34Choline transporter-like protein n=1 Tax=Bicosoeci... [more]
A0A813CX50_9DINO1.930e-2133.52Slc44a2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
K3WKP3_GLOUD7.770e-1729.60Choline transporter-like protein n=1 Tax=Globispor... [more]
W2RB52_PHYPN5.980e-1428.97Choline transporter-like protein n=11 Tax=Phytopht... [more]
A0A329SG68_9STRA1.450e-1328.64Choline transporter-like protein n=1 Tax=Phytophth... [more]
A0A6A3PAY2_9STRA1.650e-1329.03Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
D0NFW4_PHYIT8.830e-1327.91Choline transporter-like protein n=2 Tax=Phytophth... [more]
G4Z136_PHYSP5.480e-1227.65Choline transporter-like protein n=4 Tax=Phytophth... [more]
A0A662XQY3_9STRA7.950e-1127.27Choline transporter-like protein n=1 Tax=Nothophyt... [more]
A0A6G0XXS9_9STRA2.720e-624.36Choline transporter-like protein n=1 Tax=Aphanomyc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12385:SF86CHOLINE TRANSPORTER PROTEIN 1coord: 154..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..256
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..225
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 204..226
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 154..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79179contigM-pyrifera_M_contig79179:82..849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79179.18589.1mRNA_M-pyrifera_M_contig79179.18589.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79179 82..849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79179.18589.1 ID=prot_M-pyrifera_M_contig79179.18589.1|Name=mRNA_M-pyrifera_M_contig79179.18589.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
MDRSEEPYTVYPRTVEDFILNAAKTDPTEYEFYGICVDKCPKQGDVVCND
EGPSGVSDSVKRECIWAPVTGYNNSAVDCKKIRTNCWVIGQDQTPVSFRC
VPKYEIEVDSTENCTYPSYEDIGMVLSADDPACLVKETKTESDTSAPPQP
NLLFEQLNSAQAIWGGYFTDLNRAAWVILVCSLVIGLILGFIWLFLLQKF
TGCMVWTTVVIVCLLMIGLTIYTYWLGGAIDPPSVASLSESQTSSGSSSF
TPSTGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like