mRNA_M-pyrifera_M_contig7911.18577.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7911.18577.1
Unique NamemRNA_M-pyrifera_M_contig7911.18577.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: D7FQT3_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT3_ECTSI)

HSP 1 Score: 408 bits (1048), Expect = 2.130e-140
Identity = 202/218 (92.66%), Postives = 211/218 (96.79%), Query Frame = 3 
Query:  135 MDLTTQQEYPGLKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 788
            MD+ TQQEYPGLK GE+S+GTTIMAV YDGGVIMGADSRTSTGTYVANRVSDKITSLHD+IYACRSGSAADTQA+ DYVRYFLASHSVELGRLPLVKTAAKMARGLCY NKDRLLAGMIIAGWDPV+GG+VYEIPLGGTMMKQKFAIGGSGSTYIYGHVDA F+ENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVS EYIPGD+LPFGP
Sbjct:    1 MDIATQQEYPGLKDGEISTGTTIMAVQYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAITDYVRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDGGTVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSCEYIPGDQLPFGP 218
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: A0A836CD01_9STRA (Proteasome endopeptidase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD01_9STRA)

HSP 1 Score: 359 bits (921), Expect = 3.810e-121
Identity = 174/211 (82.46%), Postives = 194/211 (91.94%), Query Frame = 3 
Query:  156 EYPGLKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 788
            +YPGLK  E+S+GTTIMA  YDGGVIMGADSRTSTGTYVANRVSDKIT+LHDYIYACRSGSAADTQA++DYVRYFL+SHS E+GRLP VKTAA +AR +CY NKD LLAGMIIAGWDPV GGSVYEIPLGGT+MKQ+FAIGGSGSTYIYGHVDA ++E MTKEEA+ FVRKAI+HAMARDGSSGGVIR+V IDK GV REYIPG++LP+GP
Sbjct:    6 DYPGLKPNEISTGTTIMACMYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAISDYVRYFLSSHSAEVGRLPTVKTAANLARRICYNNKDNLLAGMIIAGWDPVHGGSVYEIPLGGTIMKQQFAIGGSGSTYIYGHVDAAYKEGMTKEEAKIFVRKAIAHAMARDGSSGGVIRIVTIDKDGVEREYIPGNELPYGP 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: W7TIP5_9STRA (Proteasome subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIP5_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.270e-110
Identity = 161/218 (73.85%), Postives = 188/218 (86.24%), Query Frame = 3 
Query:  135 MDLTTQQEYPGLKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 788
            M  T+ +   GLK GEV++GTTIMAV +DGGV++GADSRTSTGTYVANRVSDK+T+LH +IY CRSGSAADTQA+ADYVRYFLASH+++LGR P V TAAK+   L Y NKD LLAG+II GWDP +GG VY + LGGT+ +QKF+IGGSGSTYIYGHVD  F+ENMT+EE Q FV+KAISHAMARDGSSGGVIRMV IDK+GVSRE+IPGDKLP+GP
Sbjct:    3 MPSTSLEHSMGLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALADYVRYFLASHAIDLGRTPAVYTAAKLMSTLIYRNKDNLLAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKENMTREECQNFVKKAISHAMARDGSSGGVIRMVTIDKSGVSREFIPGDKLPYGP 220
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: A0A7S3M7L5_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7L5_9STRA)

HSP 1 Score: 318 bits (816), Expect = 3.040e-105
Identity = 151/208 (72.60%), Postives = 182/208 (87.50%), Query Frame = 3 
Query:  165 GLKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 788
            GL++GE+SSGTTIMAVT+DGGV++GADSRTSTG+YVANRVSDKI  +HDY++ACRSGSAADTQAV+DYV+Y++ SHS ELGRLP VKT A + R +CY NKDR+ AGMI  GWDP EGG VYEIPLGGTMM+QKFA+GGSGS+YIYG VD+ +RE M+KEE + FV+ AISHAMARDGSSGGVIR+VVID++G+ +E + GD LPF P
Sbjct:    8 GLREGEMSSGTTIMAVTFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDYVWACRSGSAADTQAVSDYVKYYINSHSTELGRLPRVKTCANLMRKICYNNKDRMQAGMICGGWDPYEGGQVYEIPLGGTMMQQKFALGGSGSSYIYGLVDSTYREGMSKEECKVFVKTAISHAMARDGSSGGVIRLVVIDQSGIEKEVVLGDNLPFKP 215
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: A0A7S2WTH2_9STRA (Proteasome endopeptidase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTH2_9STRA)

HSP 1 Score: 315 bits (808), Expect = 5.680e-104
Identity = 146/206 (70.87%), Postives = 181/206 (87.86%), Query Frame = 3 
Query:  171 KQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 788
            + GEVS+GTTIMA  +DGGV++GADSR STGTY+ANRVSDK+ +LHD I+ CRSGSAADTQA++DYVRY+L+SH+ E+ R P VKTAA +AR + YENKD LLAG+I+ GWDPVEGGSVY IPLGGT+MK  FAIGGSGSTYIYGHVDA+++E M++EEAQ FV+K+I+HAMARDGSSGG+IR+V +D  GV R+Y+PGD+LP+GP
Sbjct:   14 RDGEVSTGTTIMACCFDGGVVLGADSRVSTGTYIANRVSDKVAALHDTIFMCRSGSAADTQAISDYVRYWLSSHATEVNRPPTVKTAATLARRIAYENKDALLAGVIVGGWDPVEGGSVYVIPLGGTLMKMPFAIGGSGSTYIYGHVDAQYKEGMSREEAQAFVKKSIAHAMARDGSSGGIIRLVTVDANGVERDYVPGDQLPYGP 219
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: K3WDU5_GLOUD (Proteasome subunit beta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WDU5_GLOUD)

HSP 1 Score: 304 bits (779), Expect = 1.340e-99
Identity = 144/209 (68.90%), Postives = 179/209 (85.65%), Query Frame = 3 
Query:  156 EYPGLKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 782
            E+  LK+GE+ +GT+I+AV +DGGV++GADSRTSTGTY+ANRVSDK+T LHD I+ CRSGSAADTQA++DYV+YFL+SH+V+LGRLP V TAA + R LCY NKDRLLAG+I+AGWDP++GG V+ +P+GG M++Q FAIGGSGSTYIYG VDAE++  MTKEE Q+FV+KA++HAMARDGSSGGVIR V I K  V RE+  GD LPF
Sbjct:    8 EFSMLKRGEIDAGTSIIAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIFCCRSGSAADTQALSDYVKYFLSSHAVDLGRLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPIKGGQVFSVPIGGAMVEQDFAIGGSGSTYIYGLVDAEYKPGMTKEECQKFVKKALAHAMARDGSSGGVIRTVTITKDEVVREFTSGDALPF 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: F0W411_9STRA (Proteasome subunit beta n=2 Tax=Albugo TaxID=65356 RepID=F0W411_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.010e-98
Identity = 145/205 (70.73%), Postives = 174/205 (84.88%), Query Frame = 3 
Query:  168 LKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 782
            LK GEV +GT+I+AV +DGGV++GADSRTSTG YVANRVSDK+T LHD IY CRSGSAADTQA++DYVRYFL+SHS+++G+LP V TAA + R LCY NKDRLLAG+I+AGWDPV GG VY IP+GG M+KQ FAIGGSGSTYIYG VDA +R +MT+EE Q FV+K ++HAMARDGSSGGVIR V I K  V+RE+  G++LPF
Sbjct:   10 LKNGEVDAGTSIIAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGLHDRIYCCRSGSAADTQALSDYVRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVHGGQVYSIPIGGAMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARDGSSGGVIRTVTITKDSVTREFTSGEQLPF 214
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: A0A7S2V2Y9_9STRA (Proteasome endopeptidase complex n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y9_9STRA)

HSP 1 Score: 303 bits (775), Expect = 1.410e-98
Identity = 146/207 (70.53%), Postives = 171/207 (82.61%), Query Frame = 3 
Query:  168 LKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 788
            LK GEVS+GTTIMA  Y+GGV++GADSRTSTGTYVANR S+K+T L D I+ CRSGSAADT+AV DYV+YFL SHS E+G  P V++AA + R LCYENKD L+AGMII GWDPV+GG VY +PLGGT+M+Q  AIGGSGSTYIYGHVDA +R  M+KEE   FV KAISHAMARDGSSGGVIR+V ID  G+ ++Y  GDKLP+GP
Sbjct:   40 LKPGEVSTGTTIMACEYEGGVVVGADSRTSTGTYVANRASNKVTYLADNIFGCRSGSAADTEAVTDYVKYFLESHSTEIGGPPRVRSAAHLVRKLCYENKDALMAGMIIGGWDPVDGGQVYSVPLGGTLMRQPVAIGGSGSTYIYGHVDAAYRPGMSKEECHAFVAKAISHAMARDGSSGGVIRLVSIDANGIEKQYFAGDKLPYGP 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: A0A0W8D518_PHYNI (Proteasome subunit beta n=15 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D518_PHYNI)

HSP 1 Score: 301 bits (771), Expect = 2.180e-98
Identity = 146/205 (71.22%), Postives = 176/205 (85.85%), Query Frame = 3 
Query:  168 LKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 782
            LK GEV +GT+I+AV ++GGV++GADSRTSTGTYVAN VSDK+T LHD ++ CRSGSAADTQA++DYVRY+L+SHSVELGRLP V TAA + R LCY NKDRLLAG+I+AGWDPV+GG V+ IP+GG M++Q FAIGGSGSTYIYG VD+E+R NMTKEE QQFV+KA++HAMARDGSSGGVIR V I +  V R++  GD LPF
Sbjct:   12 LKPGEVDAGTSIIAVRFNGGVVLGADSRTSTGTYVANCVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQQFVKKALAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Match: A0A662XK04_9STRA (Proteasome subunit beta n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XK04_9STRA)

HSP 1 Score: 299 bits (765), Expect = 4.290e-97
Identity = 147/222 (66.22%), Postives = 186/222 (83.78%), Query Frame = 3 
Query:  123 RNRRMDLTTQQEYPG--LKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAAKMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 782
            R+ R  +T Q+   G  LK+GE+ +GT+I+AV + GGV++GADSRTSTGTY+ANRVSDK+T LHD ++ CRSGSAADTQA++DYVRYFL+SH+V+LGR P V TAA + R LCY NKDRLLAG+I+AGWD V+GG V+ IP+GG M++Q FAIGGSGSTYIYG VDAE+R +MTKEE Q+FV+KA+SHAMARDGSSGGVIR V I ++ V R++I G++LPF
Sbjct:   21 RSIRSSMTKQEIDEGGMLKRGEIDAGTSIIAVKFKGGVVLGADSRTSTGTYIANRVSDKLTPLHDRVFCCRSGSAADTQALSDYVRYFLSSHAVDLGRPPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDSVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDAEYRPDMTKEECQRFVKKALSHAMARDGSSGGVIRTVTITESEVVRDFISGEQLPF 242
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7911.18577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT3_ECTSI2.130e-14092.66Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A836CD01_9STRA3.810e-12182.46Proteasome endopeptidase complex n=1 Tax=Tribonema... [more]
W7TIP5_9STRA1.270e-11073.85Proteasome subunit beta n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S3M7L5_9STRA3.040e-10572.60Proteasome subunit beta n=1 Tax=Spumella elongata ... [more]
A0A7S2WTH2_9STRA5.680e-10470.87Proteasome endopeptidase complex n=1 Tax=Rhizochro... [more]
K3WDU5_GLOUD1.340e-9968.90Proteasome subunit beta n=2 Tax=Pythiaceae TaxID=4... [more]
F0W411_9STRA1.010e-9870.73Proteasome subunit beta n=2 Tax=Albugo TaxID=65356... [more]
A0A7S2V2Y9_9STRA1.410e-9870.53Proteasome endopeptidase complex n=1 Tax=Fibrocaps... [more]
A0A0W8D518_PHYNI2.180e-9871.22Proteasome subunit beta n=15 Tax=Peronosporaceae T... [more]
A0A662XK04_9STRA4.290e-9766.22Proteasome subunit beta n=3 Tax=Peronosporaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7911contigM-pyrifera_M_contig7911:4683..9138 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.8
Seed ortholog evalue2.1e-112
Seed eggNOG ortholog2880.D7FQT3
Preferred namePBA1
KEGG koko:K02738,ko:K11507
KEGG Pathwayko03050,map03050
KEGG ModuleM00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019774,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.Proteasome subunit beta
EggNOG OGsKOG0174@1,KOG0174@2759
Ec32 ortholog descriptionPeptidase T1A, proteasome beta-subunit
Ec32 orthologEc-16_000630.1
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03036,ko03051
Exons5
Model size1225
Cds size657
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816694.2014449-UTR-M-pyrifera_M_contig7911:4682..48161622816694.2014449-UTR-M-pyrifera_M_contig7911:4682..4816Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7911 4683..4816 +
1692278123.8561575-UTR-M-pyrifera_M_contig7911:4682..48161692278123.8561575-UTR-M-pyrifera_M_contig7911:4682..4816Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7911 4683..4816 +
1622816694.2748365-UTR-M-pyrifera_M_contig7911:8704..91381622816694.2748365-UTR-M-pyrifera_M_contig7911:8704..9138Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7911 8705..9138 +
1692278123.9343019-UTR-M-pyrifera_M_contig7911:8704..91381692278123.9343019-UTR-M-pyrifera_M_contig7911:8704..9138Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7911 8705..9138 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816694.2148407-CDS-M-pyrifera_M_contig7911:4816..48761622816694.2148407-CDS-M-pyrifera_M_contig7911:4816..4876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 4817..4876 +
1692278123.871722-CDS-M-pyrifera_M_contig7911:4816..48761692278123.871722-CDS-M-pyrifera_M_contig7911:4816..4876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 4817..4876 +
1622816694.2277212-CDS-M-pyrifera_M_contig7911:6145..63451622816694.2277212-CDS-M-pyrifera_M_contig7911:6145..6345Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 6146..6345 +
1692278123.879837-CDS-M-pyrifera_M_contig7911:6145..63451692278123.879837-CDS-M-pyrifera_M_contig7911:6145..6345Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 6146..6345 +
1622816694.2404609-CDS-M-pyrifera_M_contig7911:6869..70731622816694.2404609-CDS-M-pyrifera_M_contig7911:6869..7073Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 6870..7073 +
1692278123.8945205-CDS-M-pyrifera_M_contig7911:6869..70731692278123.8945205-CDS-M-pyrifera_M_contig7911:6869..7073Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 6870..7073 +
1622816694.2541656-CDS-M-pyrifera_M_contig7911:7441..75861622816694.2541656-CDS-M-pyrifera_M_contig7911:7441..7586Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 7442..7586 +
1692278123.911029-CDS-M-pyrifera_M_contig7911:7441..75861692278123.911029-CDS-M-pyrifera_M_contig7911:7441..7586Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 7442..7586 +
1622816694.264025-CDS-M-pyrifera_M_contig7911:8656..87041622816694.264025-CDS-M-pyrifera_M_contig7911:8656..8704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 8657..8704 +
1692278123.925052-CDS-M-pyrifera_M_contig7911:8656..87041692278123.925052-CDS-M-pyrifera_M_contig7911:8656..8704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7911 8657..8704 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7911.18577.1prot_M-pyrifera_M_contig7911.18577.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7911 4817..8704 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7911.18577.1

>prot_M-pyrifera_M_contig7911.18577.1 ID=prot_M-pyrifera_M_contig7911.18577.1|Name=mRNA_M-pyrifera_M_contig7911.18577.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp
MDLTTQQEYPGLKQGEVSSGTTIMAVTYDGGVIMGADSRTSTGTYVANRV
SDKITSLHDYIYACRSGSAADTQAVADYVRYFLASHSVELGRLPLVKTAA
KMARGLCYENKDRLLAGMIIAGWDPVEGGSVYEIPLGGTMMKQKFAIGGS
GSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVID
KTGVSREYIPGDKLPFGP*
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mRNA from alignment at M-pyrifera_M_contig7911:4683..9138+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7911.18577.1 ID=mRNA_M-pyrifera_M_contig7911.18577.1|Name=mRNA_M-pyrifera_M_contig7911.18577.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4456bp|location=Sequence derived from alignment at M-pyrifera_M_contig7911:4683..9138+ (Macrocystis pyrifera P11B4 male)
TGGCGCGAGACACCGCAGTCCTCGACCACGAACAACTTCTCGAGTAGCTT
TTTCACGAGGACGTTTGCATCCCTGAATCATTGGCAAGACGCAGCGATCG
CATTTTGAAAGCGTGAGCTCGAAGGAATCGAAGGATGGATCTCACAACTC
AACAAGAGTACCCAGGCCTGAAGCAAGGCGAGGTTTCGTCGGGGGTGAGT
ACATCTCTAAGCCTTCAAATCAAGTGGGAACATCGTCGATTGCGGTTCGA
GCGAGATCGTGTTGCTGGATATACATACATACCAGGTTGCATTGATGGTG
TGCAAGAGTAGAGTTCGATGTAAGCGCCTGCCGTTGCCTAACTCCTATGC
AAGAGCAACGCATTCATCCTTATCGTCGTTTTGAACTATTACCAGGCAGG
TGTATCAAGCAGTATAATAGTCAACTATTAATAGACAATAGACGTTGTGA
TACTGCTGTAATATCACTGCTGCTACTGCTGTGCTGTACAGCATAGAGAG
CTGCTTTCATCCTATTTTACATACCGGGTACTGATGTACTACTGATGTAC
GATGATAATGCTGTAGCACAATCTAGAGTTTACGAGCAAGGAACACCATG
TTGTCGTGGCTGCGTGTTTCTCAAGAGGGGGTTATGCCTTACCGTTGTCG
TGAGGCCGTGGTCGCACCAATTCCAATGCTGATGCTTGCCTCGTGTGGTG
TGGTGTTTCGATGCGCCTTAAATCTGCCACGTATTGTATGTACCTGGTGC
TGGTATGATATCTCACCTATGACATGTAACTGCCATGACCTCACCAAAGG
ATGAAGCACTATTAATAGCATCGCAGCGTCGCTAACTTCGTACGACCAGG
CGCTTGGTGCACTCTACGGTTTACGGCCTACGAGCAAGTATTGTTCTTAA
GATGACATCCAACATACGTGCTCTGACTGCTTGCTGTAAATATGCGTGTG
GTACGTGCCTGATATATTTTCGAAACTGTTGTATCACAGCGGTCAGCAAA
TATGGCGCAGTAGCGTGTCTGTTGGGCGTTTGGAGTGACGAATACTCACA
CTCACGTACACTCAGCCCAGAAAATGGTGGACGTGCATATATCGTGCCAA
GATTGAGCTGTGCAGACCTGTGCGCACGAAGTCTTTGTGCTTCGGCTCCT
TCAGGGGTAGAGATTTCGCGCATCCTACCTACCTATCCTTGTGAACTACC
AGTAAAGCTGTTGGGGATGGTGCCCAAGCCAAGCTTCGTAGCCCGTTCTG
TGCGCAATACGTTGGGTACTGCGGCAATGGACATAAGGACATATGCTCCT
CTCTTGCTGCTGTGCCTTGAATATAGGTGTTTGCGTTGCAAAGGTCTGGT
GCCATTGTGAAGAAGAGGGTTCAAATTTATCGTGTGTGGACGAAACCACC
AGCGACTGACGGCAACCCCAACCGCTCCCTTCCATCCTGCGCCTCCTTCT
CACGCTTTTTTAGACCACAATCATGGCCGTAACCTACGATGGCGGGGTCA
TCATGGGTGCGGACTCGCGGACTTCTACCGGCACGTACGTGGCCAATCGC
GTGAGTGACAAGATTACGTCATTGCACGACTACATCTACGCCTGTCGCTC
TGGATCGGCCGCTGATACCCAGGCTGTTGCGGACTACGTGCGCTACTTCT
TGGCCTCACACAGGTGAGACACTCTAGTCGGAATTGCCCAATCGCTTCGC
CGCAACGAAAGCATCTTCGAATCCGCATTCCGTGATTTTTGCAAGCATGA
TAGCTGTGTGATTGCAATTTTGGCATACCGGCGTGGTATACGAGGTATAT
GAAAAGGCTAAAGAAAACGGGGGAGATAGAACGCGTTTTAATCTTCAAGC
ACTCCCGACCTTTCCTATGCGCCCACATGTGAGGTTGATGCTTCGGCCGC
GTCGCCATGTACGCGGTGCATCGGAACCTGTAGCATGTGCGTTTATATAC
GTGCATACCCGCTGCCACGCACTTGTGTGGTGCTGAAATGTGACTATTTA
TTAGTGGAAGCACACATTTGGGTCATACTAAGTTATGCTGTGGAGTTTAA
CACCTCTGTCCCAAGTGTTTGTATGATTGATGAATTTTTATGCCTGATTT
CCATTCGCCAATCGATCGCTCCTGAAGATGTGCTGAATTCGTGTCACTGC
TGTTGTGACGCCGATGCTGATGTTGTGTGTCTCTCAGTGTCGAATTGGGA
CGGCTTCCGTTGGTGAAGACCGCGGCGAAAATGGCACGTGGTCTATGCTA
CGAGAACAAGGACCGACTGCTGGCGGGGATGATCATAGCAGGATGGGATC
CGGTGGAGGGGGGAAGTGTGTACGAGATCCCGCTGGGCGGGACAATGATG
AAGCAGAAGTTTGCTATCGGGGGATCCGGCTCTACGTATATGTGAGCAGG
ATAGACGACGGCGACGACCGACTGTTGCTGCAAGACCATGCGATCATCTT
ACGCTTGTAGGACTAATAGTAGATCGCATGATGCACCTTGGAGATCGTAT
CGCCACGATACCCAGGGCTGTTTTAGTTCGATTGGTAGTGTTGTCCAGAA
TCAAACTCGCACGTTAATGTGGTTGGTACCTGTGCGTTGCTCTGATTCCA
CCTCTAGGTGTGTTCTACGTTCGTTTCAGCCAAGATGCTGGTAACTCGGC
TTCTCGAGTATTAATTACCATCGCTTTCGCTCCTTCGCTGTACGTGCCAT
CCAATGTTGCAACGGATACGGGCTCGTATGACTGTGCATCGTTCGCTGTG
ATGAAACAGTTACGGCCACGTGGATGCAGAGTTCAGGGAAAATATGACAA
AGGAGGAAGCGCAGCAGTTCGTCCGCAAGGCTATTTCTCACGCGATGGCT
CGTGACGGAAGTTCGGGAGGAGTCATCCGGATGGTGGTAATCGACAAGAC
TGGGGTAAGCGACTAGCCCGGCGAGAAGTGTCCCCCAGTATCGAAGGGCA
GGACTGGTTGATTATTTTGGATGCATCGCTGACCTTTCAAGCATTCCCGC
GGTATCACCATGATAACAGCCGTATTTGACAGCGATACAGTGACCATAGT
TCGCCATGATTCATGTCGACCATGGGACGCCATGTCGGATTATCGGCGTT
TCTTTCATAATCTGCTCTCTTGTCGCACGAAAGGAATCATAACCCAAACA
TGAACTGTCACCTAGTTTCCGAACGTTGGTTCAGGGATTCCGTGAGAACT
GTTTTTCACATCAGAAGTACACGCGGTTTTGTTGAGTTAGACCCTGAAAC
TTCGCACACACCTTCCGTGCCCTTATGCCGAGGGATTTTTGGGAGGGGTG
CAAGATTTTCTTTTCTTCCGTCAGTTTTATAGGGTCTTCGGGTTTTCGTG
AATATTGGGTTTTCTGAGACCTCTGATATCTAGCGAACGAAAAAACAAAA
CTCGCGCTCCCCCCATTCACCCCTCGGCATAATGGCACGGAAGGTGTCTG
CGAAGTTTGAGGGTCTATTTTGAAAAAAATGAGTTCTCTGAGCTTGCGTG
AGCAAAAAGGTGGATACTACCGTTTTTTTTCGAAATTACTTAGTTTCAGT
ATAGAGTCGACTTTTAGCGGTAATTTTTGCTTGATTTGATCCTACGCAGC
CAATTCTTCGAATATTTGCGCAAACTTTTTCGACGTTGTAAAGACATGCC
TTGGAGTACCTAGGACAGTTTCATTCAGAAAAAAAACGAAAAAAAAAGGT
TTCTTCCTGCGGAAGGGCGTGACCATTGTCGACCTTTTTTGAGGTCTGTG
GTTGGTCGGGACACAATTTCGCTGCTAGCGCCAGCCGTAGGCACTCAACA
AAAAAAGTGGCTATGCCATTCGCTTTTGCCGTCCATTACAGTCAGTATGA
TGCCACAAATGTGACATTCGAGTAGCGCTATTGCATGCAGCATTCATGTT
CTGACGACCTTGTTTTTTTAGCTTGAACCGGCCTCTGCCCGAAAAATTAC
GTGCGCGTGCTATTTATTCTCCAGGTTTCTCGCGAGTACATTCCAGGAGA
CAAGTTGCCGTTCGGACCATGACCGTCCCTGGCGTCCGCAGAAGGCTCAC
ATTTCGTTTTTCAGGACAAGGACGGCAAAGGAGGCGACATGTTGCCTGGA
ACAGCAACTCTTGCTTGGTTTCCGGCAAACGCGCATTATCACGGCTGAAC
GTTCTGGCTCGATTAGTGCTATAACCTGTTTTTTCGGTTGGGATTTGCTT
GATTCGGGCTTGCTTCGCGGTTTGCGGTTTTTGAGGTGGTCCGCCTACTG
TCCGACAAGCGCAAAAATTGAGTGGAAGTGGTGAACGAGCGAAATGACTT
GAGGGCCAGAATGAAAACAGATTCTTCCACATGGACGCCGTTCAAAAATA
GTTAGTGTCTAATGAACACGGACACTTAGCGTTTTCTACGCCTGCCATGC
AATCGACGGCGAGAGAAGAAAAAAAAAGAGCAGTCCTGTGCTCTGACCGC
ATGCCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7911:4683..9138+

>mRNA_M-pyrifera_M_contig7911.18577.1 ID=mRNA_M-pyrifera_M_contig7911.18577.1|Name=mRNA_M-pyrifera_M_contig7911.18577.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1314bp|location=Sequence derived from alignment at M-pyrifera_M_contig7911:4683..9138+ (Macrocystis pyrifera P11B4 male)
ATGGATCTCACAACTCAACAAGAGTACCCAGGCCTGAAGCAAGGCGAGGT
TTCGTCGGGGATGGATCTCACAACTCAACAAGAGTACCCAGGCCTGAAGC
AAGGCGAGGTTTCGTCGGGGACCACAATCATGGCCGTAACCTACGATGGC
GGGGTCATCATGGGTGCGGACTCGCGGACTTCTACCGGCACGTACGTGGC
CAATCGCGTGAGTGACAAGATTACGTCATTGCACGACTACATCTACGCCT
GTCGCTCTGGATCGGCCGCTGATACCCAGGCTGTTGCGGACTACGTGCGC
TACTTCTTGGCCTCACACAGACCACAATCATGGCCGTAACCTACGATGGC
GGGGTCATCATGGGTGCGGACTCGCGGACTTCTACCGGCACGTACGTGGC
CAATCGCGTGAGTGACAAGATTACGTCATTGCACGACTACATCTACGCCT
GTCGCTCTGGATCGGCCGCTGATACCCAGGCTGTTGCGGACTACGTGCGC
TACTTCTTGGCCTCACACAGTGTCGAATTGGGACGGCTTCCGTTGGTGAA
GACCGCGGCGAAAATGGCACGTGGTCTATGCTACGAGAACAAGGACCGAC
TGCTGGCGGGGATGATCATAGCAGGATGGGATCCGGTGGAGGGGGGAAGT
GTGTACGAGATCCCGCTGGGCGGGACAATGATGAAGCAGAAGTTTGCTAT
CGGGGGATCCGGCTCTACGTATATTGTCGAATTGGGACGGCTTCCGTTGG
TGAAGACCGCGGCGAAAATGGCACGTGGTCTATGCTACGAGAACAAGGAC
CGACTGCTGGCGGGGATGATCATAGCAGGATGGGATCCGGTGGAGGGGGG
AAGTGTGTACGAGATCCCGCTGGGCGGGACAATGATGAAGCAGAAGTTTG
CTATCGGGGGATCCGGCTCTACGTATATTTACGGCCACGTGGATGCAGAG
TTCAGGGAAAATATGACAAAGGAGGAAGCGCAGCAGTTCGTCCGCAAGGC
TATTTCTCACGCGATGGCTCGTGACGGAAGTTCGGGAGGAGTCATCCGGA
TGGTGGTAATCGACAAGACTGGGTTACGGCCACGTGGATGCAGAGTTCAG
GGAAAATATGACAAAGGAGGAAGCGCAGCAGTTCGTCCGCAAGGCTATTT
CTCACGCGATGGCTCGTGACGGAAGTTCGGGAGGAGTCATCCGGATGGTG
GTAATCGACAAGACTGGGGTTTCTCGCGAGTACATTCCAGGAGACAAGTT
GCCGTTCGGACCATGAGTTTCTCGCGAGTACATTCCAGGAGACAAGTTGC
CGTTCGGACCATGA
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