mRNA_M-pyrifera_M_contig79069.18571.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: A0A1Q3IYZ4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 65-7 TaxID=1895712 RepID=A0A1Q3IYZ4_9PROT) HSP 1 Score: 54.7 bits (130), Expect = 9.970e-7 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 103 QAFEGKDYANAALLFLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRWL 255 +AF+ +DY+ A L+ A NP AQ LG+MYLDGKGV ++++EA RW+ Sbjct: 29 RAFQNRDYSRAVSLWRPLAVQGNPTAQNNLGIMYLDGKGVPRNMNEAVRWM 79
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: A0A843ICG6_9ARCH (Sel1 repeat family protein n=1 Tax=Candidatus Methanomethylophilaceae archaeon TaxID=2517205 RepID=A0A843ICG6_9ARCH) HSP 1 Score: 55.1 bits (131), Expect = 1.620e-6 Identity = 33/85 (38.82%), Postives = 41/85 (48.24%), Query Frame = 1 Query: 70 SVIVQTVGLAKQAFEGKDYANAALLFLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRWLWAGACAQDGPAMRGLATMYLEGL 324 S + + K+ KD+A A + A D+ AQ +G MYL GKGV KDLD A WL A AM L MY +GL Sbjct: 117 SELFSLYDVGKRGLVRKDHAEAIRFYTNCAEMDDVHAQDVIGFMYLMGKGVRKDLDNAMYWLRKAADNGSSSAMYHLGQMYDQGL 201
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: A0A7S7NN26_9BACT (Sel1 repeat family protein n=1 Tax=Paludibaculum fermentans TaxID=1473598 RepID=A0A7S7NN26_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 1.920e-6 Identity = 28/64 (43.75%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 118 KDYANAALLFLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRWLWAGACAQDGPAMRGLATM 309 KDY A +L +AN +P AQ ++GL+Y GKGV KDL +A+ WL A GP LA + Sbjct: 55 KDYVQAHHWYLLSANQGDPWAQASIGLLYRFGKGVPKDLVQAYMWLSLATSATHGPDSDSLAEL 118
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: I2K5E9_9PROT (Beta-lactamase n=3 Tax=unclassified Sulfurovum TaxID=2646778 RepID=I2K5E9_9PROT) HSP 1 Score: 51.2 bits (121), Expect = 2.170e-5 Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 1 Query: 76 IVQTVGLAKQAFEG--KDYANAALL-----FLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRWLWAGACAQDGPAMRGLATMY 312 I+ TV L F +DY N + F + A D+ AQ +GL+Y +GKGV+KDLD+A +W A +GPA LA +Y Sbjct: 8 IIATVTLLANDFNQAVEDYNNGGYIKALNTFYELAKKDDAKAQYNVGLIYANGKGVQKDLDKAKKWYEKAAKQGNGPAQYNLAQLY 93
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: UPI000490F183 (sel1 repeat family protein n=2 Tax=unclassified Methylophilus TaxID=2630143 RepID=UPI000490F183) HSP 1 Score: 50.8 bits (120), Expect = 3.810e-5 Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 1 Query: 55 AAMSPSVI-VQTVGLAKQAFEGKDYANAALLFLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRW 252 A +S S+ T+ AKQ KDYA A ++L AN ++ A LGLMY DG GV K+LDEA +W Sbjct: 25 ALLSTSLTQANTLEEAKQKLAEKDYAAAHAIYLSLANQNDAKACYNLGLMYQDGDGVAKNLDEAVKW 91
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: A0A2W5QN45_VARPD (Uncharacterized protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A2W5QN45_VARPD) HSP 1 Score: 50.8 bits (120), Expect = 3.870e-5 Identity = 34/86 (39.53%), Postives = 43/86 (50.00%), Query Frame = 1 Query: 43 VEGGAAMSPSVIVQTVGLAKQAFEGKDYANAALLFLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRWLWAGACAQDGPAMRGL 300 V+ GA + + G A+ A D+A A L AA A NP A ALGL+YL G GVE D++ A R+ A A A R L Sbjct: 164 VDAGALDELKTVTEAAGRARAA---GDFAQLATLLRAAAEAGNPTAAEALGLLYLQGNGVEADMEAAVRFWRAAAGQGSARAQRNL 246
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: A0A2E8XRQ0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XRQ0_9PROT) HSP 1 Score: 48.1 bits (113), Expect = 4.630e-5 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 1 Query: 103 QAFEGKDYANAALLFLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRWL 255 +A+E KDYA A ++L A+A AQ LG +Y +G+GV+++L EA RWL Sbjct: 8 RAYEVKDYARAYAIWLPLADAGGASAQFHLGALYFEGRGVDRNLGEAKRWL 58
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Match: UPI000646CE43 (sel1 repeat family protein n=4 Tax=Methylophilus TaxID=16 RepID=UPI000646CE43) HSP 1 Score: 50.4 bits (119), Expect = 5.250e-5 Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 85 TVGLAKQAFEGKDYANAALLFLKAANADNPLAQGALGLMYLDGKGVEKDLDEAFRWLWAGACAQDGPAMRGLATMYLE 318 T+ AKQ KDYA A ++L AN ++ A LGLMY DG GV K++DEA +W A A LA++ + Sbjct: 36 TLEEAKQKLLQKDYAGAHAIYLSLANQNDTKACYNLGLMYQDGDGVAKNMDEAVKWYTKSAELNYKEAQYTLASLVFQ 113 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79069.18571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79069.18571.1 >prot_M-pyrifera_M_contig79069.18571.1 ID=prot_M-pyrifera_M_contig79069.18571.1|Name=mRNA_M-pyrifera_M_contig79069.18571.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp NKRNEEGKEEAEANVEGGAAMSPSVIVQTVGLAKQAFEGKDYANAALLFLback to top mRNA from alignment at M-pyrifera_M_contig79069:634..957+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79069.18571.1 ID=mRNA_M-pyrifera_M_contig79069.18571.1|Name=mRNA_M-pyrifera_M_contig79069.18571.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig79069:634..957+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79069:634..957+ >mRNA_M-pyrifera_M_contig79069.18571.1 ID=mRNA_M-pyrifera_M_contig79069.18571.1|Name=mRNA_M-pyrifera_M_contig79069.18571.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig79069:634..957+ (Macrocystis pyrifera P11B4 male)back to top |