mRNA_M-pyrifera_M_contig79044.18564.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A8J7JWY6_9GAMM (DUF4214 domain-containing protein n=1 Tax=Pontibacterium sp. N1Y112 TaxID=2781979 RepID=A0A8J7JWY6_9GAMM) HSP 1 Score: 101 bits (252), Expect = 1.580e-23 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 1 Query: 22 SEDGSLYRLYCAVFLRQPDPAGWAYWKSQ---SLSIWEIAELFGISPEFKNTYGEVDAEEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQ 333 +ED SL RLY AVF R PD G+ YW + ++ ++ E F +SPEF NTY E+D +F+ +Y NV++R D +G+ YW +LES TLSR ++V FS+S EF+ Sbjct: 188 AEDQSLARLYKAVFDRMPDTDGFQYWSERLDTGVNFDDVVENFLVSPEFINTYSELDNSQFLDTLYNNVLNRDADSEGHQYWSGQLESNTLSRAQIVQNFSESSEFK 294
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A349AZN9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349AZN9_9ACTN) HSP 1 Score: 101 bits (252), Expect = 4.390e-23 Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 19 SSEDGSLYRLYCAVFLRQPDPAGWAYWK---SQSLSIWEIAELFGISPEFKNTYGEVDAEEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQS 336 S +G++YRLY A FLR+PD G+AYW + + +I+ F S EF+ YG VD F+ LVY NV+ R D+ GYDYW+ ++ G L RG +++YFSDS+EF++ Sbjct: 40 SGAEGTIYRLYRAYFLREPDADGFAYWNGVYAMGYPLDKISNDFARSDEFQQRYGSVDNRRFLELVYHNVLGRDPDQSGYDYWLDQMNRGML-RGFVMIYFSDSDEFRT 147
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A1N6XQH8_9GAMM (Uncharacterized protein n=2 Tax=Marinobacterium stanieri TaxID=49186 RepID=A0A1N6XQH8_9GAMM) HSP 1 Score: 98.6 bits (244), Expect = 6.550e-22 Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 22 SEDGSLYRLYCAVFLRQPDPAGWAYWKSQ---SLSIWEIAELFGISPEFKNTYGEVDAEEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQS 336 SEDG++YRLY AVF R PD AG+ YW + LS +I + F S EFK Y + D + +VS +Y NV+ R D +G YW+ LE G RG+++ FSDS EF++ Sbjct: 281 SEDGAVYRLYRAVFDRDPDEAGFKYWAGRLDHELSFEQIIDRFIDSGEFKTLYADADDQGYVSKLYNNVLEREPDEEGLRYWVGNLEEGRWDRGDVLARFSDSGEFKN 388
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A3S4GN15_9HYPH (Uncharacterized protein n=2 Tax=Devosia equisanguinis TaxID=2490941 RepID=A0A3S4GN15_9HYPH) HSP 1 Score: 92.4 bits (228), Expect = 2.530e-20 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 31 GSLYRLYCAVFLRQPDPAGWAYWKSQ----SLSIWEIAELFGISPEFKNTYGEVDA---EEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQSRIHVDCD 357 G YRLY A F R PD G YW + ++S+ IA+ F SPEF T+G V+ FV L+YL+ + R D +GY+YW+ +L++ +RG+L+ +FS+SEE Q ++ D Sbjct: 155 GMAYRLYQAAFDRMPDAEGLTYWIGRLDTGNVSLAAIADSFIHSPEFVRTFGTVETVSNARFVELLYLHTLDRGADSEGYNYWVQRLDNNQTNRGDLLAFFSESEENQQQVAAQID 270
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A1E4DXB5_9HYPH (Uncharacterized protein n=1 Tax=Pelagibacterium sp. SCN 63-126 TaxID=1660123 RepID=A0A1E4DXB5_9HYPH) HSP 1 Score: 92.4 bits (228), Expect = 9.840e-20 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 31 GSLYRLYCAVFLRQPDPAGWAYWKSQ----SLSIWEIAELFGISPEFKNTYGEVDA---EEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQSRIHVDCD 357 G YRLY A F R PD G YW + ++S+ IA+ F SPEF T+G V+ FV L+YL+ + R D +GY+YW+ +L++ +RG+L+ +FS+SEE Q ++ D Sbjct: 267 GMAYRLYQAAFDRMPDAEGLTYWIGRLDTGNVSLAAIADSFIHSPEFVRTFGTVETVSNARFVELLYLHTLDRGADSEGYNYWVQRLDNNQTNRGDLLAFFSESEENQQQVAAQID 382
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A349B7A4_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B7A4_9ACTN) HSP 1 Score: 91.3 bits (225), Expect = 1.870e-19 Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 31 GSLYRLYCAVFLRQPDPAGWAYWKS---QSLSIWEIAELFGISPEFKNTYGEVDAEEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQSR 339 G++YRLY A FLR+P+ AG+ +W Q + I+ F S EF+ YG V EF+ VY+NVM R D GY YW+ ++ G +SRG +++YFSDS EF+S+ Sbjct: 238 GTIYRLYRAYFLREPERAGYDHWLGAYRQGYRLDGISNDFARSTEFELRYGFVSNGEFLQRVYMNVMGRAADAKGYAYWMDQMNRG-MSRGFVMIYFSDSAEFRSK 342
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A1I7N1Z9_9HYPH (Uncharacterized protein n=1 Tax=Devosia crocina TaxID=429728 RepID=A0A1I7N1Z9_9HYPH) HSP 1 Score: 90.5 bits (223), Expect = 4.460e-19 Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 31 GSLYRLYCAVFLRQPDPAGWAYW----KSQSLSIWEIAELFGISPEFKNTYGE---VDAEEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQSRI 342 G YRLY A F R PD G YW S ++S+ IA+ F SPEF T+G V E+FV L+Y + ++R D+ G DYW+ +L++ +RG+L+ +FS+SEE Q+R+ Sbjct: 253 GMAYRLYQAAFDRIPDAPGLEYWIGRLDSGNVSLTAIADSFIHSPEFIRTFGTKETVSNEKFVELLYTHTLARDFDQSGLDYWVERLDNNMTNRGDLLAFFSESEENQARV 363
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: UPI001B842337 (DUF4214 domain-containing protein n=1 Tax=Undibacterium fentianense TaxID=2828728 RepID=UPI001B842337) HSP 1 Score: 89.4 bits (220), Expect = 1.180e-18 Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 31 GSLYRLYCAVFLRQPDPAGWAYWKSQ---SLSIWEIAELFGISPEFKNTYGEVDAEE-FVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQSRI 342 G YRLY A F RQPD AG YW + +S+ +A F S EF++ YG V + F++ +Y NV+ R D GYDYW KL SG +SR E+++ FS+S E Q++I Sbjct: 251 GQAYRLYQAAFNRQPDLAGLGYWIEKLDDGMSLSRVAGEFYHSDEFRSLYGNVTSNATFITTLYQNVLHRAPDLGGYDYWNYKLNSGDMSRAEVLMSFSESAENQAQI 358
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: UPI001C62C0F7 (fibronectin type III domain-containing protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62C0F7) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-18 Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 43 RLYCAVFLRQPDPAGWAYWKSQ---SLSIWEIAELFGISPEFKNTYGEVDAEEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEF 330 RLY A +LR PD G YW Q +S+ ++E F EF+ YG + EFV L+Y N++ RPG++ G D+W A+L+S SRG +++ FS+S E+ Sbjct: 595 RLYLAYYLRTPDKGGLEYWVQQRNAGMSLTRVSEHFASLREFRERYGTLTNREFVELIYQNILGRPGEKSGVDFWTAQLDSRRRSRGWVMIGFSESSEY 693
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Match: A0A1I7MXB8_9HYPH (Uncharacterized protein n=1 Tax=Devosia crocina TaxID=429728 RepID=A0A1I7MXB8_9HYPH) HSP 1 Score: 89.0 bits (219), Expect = 1.580e-18 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 31 GSLYRLYCAVFLRQPDPAGWAYW----KSQSLSIWEIAELFGISPEFKNTYGE---VDAEEFVSLVYLNVMSRPGDRDGYDYWIAKLESGTLSRGELVVYFSDSEEFQSRIHVDCD 357 G YRLY A F R PD G YW S + ++ IA+ F SPEF T+G V EFV L+Y + + R D GYDYW+ +L+S +RG+L+ +FS+S+E Q+++ D Sbjct: 248 GMAYRLYQAAFDRMPDAEGLEYWIGRLDSGNTNLAAIADSFIHSPEFIRTFGTEATVSNAEFVELLYQHTLDRGSDGPGYDYWVERLDSNQTNRGDLLAFFSESDENQAQVASQID 363 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79044.18564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79044.18564.1 >prot_M-pyrifera_M_contig79044.18564.1 ID=prot_M-pyrifera_M_contig79044.18564.1|Name=mRNA_M-pyrifera_M_contig79044.18564.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp PGVSLNSSEDGSLYRLYCAVFLRQPDPAGWAYWKSQSLSIWEIAELFGISback to top mRNA from alignment at M-pyrifera_M_contig79044:548..904- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79044.18564.1 ID=mRNA_M-pyrifera_M_contig79044.18564.1|Name=mRNA_M-pyrifera_M_contig79044.18564.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig79044:548..904- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79044:548..904- >mRNA_M-pyrifera_M_contig79044.18564.1 ID=mRNA_M-pyrifera_M_contig79044.18564.1|Name=mRNA_M-pyrifera_M_contig79044.18564.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig79044:548..904- (Macrocystis pyrifera P11B4 male)back to top |