mRNA_M-pyrifera_M_contig78840.18522.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78840.18522.1
Unique NamemRNA_M-pyrifera_M_contig78840.18522.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A812NWK4_9DINO (ODA6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NWK4_9DINO)

HSP 1 Score: 313 bits (801), Expect = 3.380e-100
Identity = 162/266 (60.90%), Postives = 197/266 (74.06%), Query Frame = 1
Query:    1 LKDPSGRLLGGSSLEYNAEAQG-KFLVGTEQGIVVQINTRKKGKAPAETKDVGAGKHHGPIYDIQRNLTHP-KFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            LKD +G  LGG +LEYN E    KFLVGTEQG+VV INT+KKG      K+ G+GKHHGPIY IQRN TH  K+F+TVGDWSA+IWS+D  TP++TTPYA +YLT GCWSPTR GVF+TTRMDG +DVWD++HRQ+ VAYSHK+ D PLT ++VQG+     G+L AVGDA+GTV+LLE S+SL  PQ  EK   ++MLDRE  RE+NL +RA+ELE                G DG+D  MEETLR+VDA+FLAMIK AEEE+ R
Sbjct:  312 LKDAAGAELGGCALEYNVEGGSTKFLVGTEQGMVVSINTKKKGGQMVAVKEAGSGKHHGPIYSIQRNPTHAGKYFLTVGDWSARIWSDDSATPILTTPYAPTYLTSGCWSPTRAGVFFTTRMDGVLDVWDLFHRQSDVAYSHKIGDVPLTSVAVQGA-----GRLVAVGDANGTVSLLEVSESLTTPQADEKLATAAMLDRETERERNLFKRAQELEKARSKAKATGSK----GGDGEDAEMEETLRRVDAEFLAMIKDAEEEDGR 568          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A5A8CAV3_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CAV3_CAFRO)

HSP 1 Score: 311 bits (798), Expect = 1.420e-99
Identity = 168/263 (63.88%), Postives = 205/263 (77.95%), Query Frame = 1
Query:    1 LKDPSGRLLGGSSLEYNAEAQGKFLVGTEQGIVVQINTRKKG-KAPAETKDVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEE 786
            LKD SGRLLGGS LEYN EA GKFLVGTEQG +  +NT+KKG K      D GA KHHGP+Y +QRN  H KFFM+VGDW+AK+WSED  TP+++T ++++ +T GCWSPTR GVF+T R DG MDVWD YHRQ+AVAYSHKVSD PL+ ++VQGSPQ GGG+L AVGDASGTV+LLE S+SL+  Q +EK  + +ML+REA REK L QRA +L   XXXXXXXXXXXXX   +GK+D M E LR VD +FL +IK AE+++
Sbjct:  312 LKDSSGRLLGGSCLEYNPEANGKFLVGTEQGGMALVNTKKKGGKDTVRVFDTGASKHHGPVYQVQRNPFHTKFFMSVGDWTAKVWSEDNHTPIMSTRFSKASVTAGCWSPTRAGVFFTARADGVMDVWDYYHRQSAVAYSHKVSDHPLSSLAVQGSPQDGGGRLVAVGDASGTVSLLEVSESLSTAQHNEKTNVGNMLEREAVREKALEQRAAQLAKAXXXXXXXXXXXXXSAGEGKEDEMAEVLRSVDTEFLRLIKDAEQDD 574          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A7S1G3Z1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3Z1_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.690e-96
Identity = 156/262 (59.54%), Postives = 191/262 (72.90%), Query Frame = 1
Query:    1 LKDPSGRLLGGSSLEYNAEA-QGKFLVGTEQGIVVQINTRKKGKAPAETK-DVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEE 780
            L + SG +LGGSS+EYN EA   K+LVGTEQGIV+  N RKK  +      D GAGKHHGPIY IQRN THPKFF+TVGDW+A++WSED KTP++TT Y +SYLT GCWSP+R GVF+ TRMDG +D+WD Y+RQ AVAYSHKV D  L+ ++VQG+ Q GG +L AVGD +GTV+LLE  +SLA+PQ +EK  I  ML+RE+ REKNL +RA ++                   DGKD+ MEE LRKVDA+FLAMIK AEE
Sbjct:  308 LDNGSGTILGGSSMEYNIEAGPSKYLVGTEQGIVMMANLRKKKSSDCLVSLDSGAGKHHGPIYSIQRNPTHPKFFLTVGDWTARVWSEDGKTPIMTTKYCKSYLTSGCWSPSRAGVFFVTRMDGVVDIWDYYYRQNAVAYSHKVGDHSLSSVAVQGTTQTGG-RLVAVGDVNGTVSLLEVCESLAVPQSNEKVAILGMLERESKREKNLEKRAADIMRRARAAEDGGAKGDDRAPDGKDEKMEEILRKVDAEFLAMIKDAEE 568          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A7S2QVY7_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVY7_9STRA)

HSP 1 Score: 292 bits (748), Expect = 5.090e-92
Identity = 165/261 (63.22%), Postives = 192/261 (73.56%), Query Frame = 1
Query:   16 GRLLGGSSLEYNAEA-QGKFLVGTEQGIVVQINTR-KKGKAPAETKDVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            G  LGGSS+EYN EA   K+LVGTEQGIV+ IN R KK        D G GKHHGPIY IQRN TH KFFMTVGDW+A+IW ED KTP++TT Y  SYLT GCWSPTR GVFY TRMDG +D+WD ++RQ  VAYSHKV +  L+ ISVQG+ Q GG +L AVGD +GTV+LLE  DSLA  QP+EK  I+ M +RE  +EKNL  R R+L+       XXXXXXXXX  DGKD+ MEE LRKVDADFLAMIK AE++E +
Sbjct:  335 GMTLGGSSMEYNQEAGPTKYLVGTEQGIVLAINLRNKKSNNGITVYDSGPGKHHGPIYSIQRNPTHNKFFMTVGDWTARIWVEDLKTPIMTTKYHSSYLTSGCWSPTRAGVFYVTRMDGVVDIWDYFYRQNEVAYSHKVGEDALSTISVQGNMQSGG-RLVAVGDVNGTVSLLEVCDSLASQQPNEKMAINGMFERETKQEKNLELRERDLKRQRAAEEXXXXXXXXXXXDGKDEKMEELLRKVDADFLAMIKEAEDDESK 594          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A6V1SU02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SU02_HETAK)

HSP 1 Score: 288 bits (736), Expect = 6.950e-91
Identity = 165/278 (59.35%), Postives = 197/278 (70.86%), Query Frame = 1
Query:    1 LKDPSGRLL------------GGSSLEYNAEA-QGKFLVGTEQGIVVQINTRK-KGKAPAETKDVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            L DPS RLL            GGS+LEYN EA   KFLVGTEQG+V+ +NTR  K        D+G GKHHGPIY IQRN T+ KFF+TVGDW+A+IW+ED KTP++TT Y  +YLT GCWSP R GVF+ TRMDG +D+WD ++RQ  VAYSHKV D PL+ ISVQG  QGGG +L AVGD +GTV+LLE  DSL  PQP+EK  I++ML+RE  +EKNL  R     XXXXXXXXXX        DGKD+ MEE LR VDA FLAMIK+AE++E +
Sbjct:  255 LADPSDRLLLATDAKGGGMVLGGSALEYNTEAGPTKFLVGTEQGVVLSVNTRNAKQNNGIAVFDMGPGKHHGPIYSIQRNPTNTKFFLTVGDWTARIWTEDLKTPIMTTKYHPAYLTAGCWSPARAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDSPLSSISVQGHVQGGG-RLVAVGDTNGTVSLLEVCDSLGSPQPNEKAAINAMLERETKQEKNLDLREXXXXXXXXXXXXXXQREAAEKKDGKDEKMEELLRMVDASFLAMIKSAEDDESK 531          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: D8LH57_ECTSI (Putative, Dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH57_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 1.670e-88
Identity = 152/262 (58.02%), Postives = 186/262 (70.99%), Query Frame = 1
Query:   16 GRLLGGSSLEYNAEA-QGKFLVGTEQGIVVQINTR-KKGKAPAETKDVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQ-PHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            G +LGGSS+EYN EA   K+LVGTEQGIV+Q+N R +K        D+GAGKHHGPIY IQRN T  K+FMTVGDW+A+IW+ED KTP++TT Y  +YLT GC+SPTR GVF+ TRMDG +D+WD ++RQ  VAYSHKV D PL+ ISVQG+ Q GG KL AVGD +GTV+LLE  +SLA+     EKG I +M +RE  +EKNL  R R+L                   DGKD+ MEE LRKVDADFLAMIK AE++E +
Sbjct:  325 GMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGAGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGG-KLVAVGDVNGTVSLLEVCESLAVSAGSQEKGAIGAMFEREMKQEKNLELRERDLRRAKAAEQDAKNKADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESK 585          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A7S2FLW6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLW6_9STRA)

HSP 1 Score: 281 bits (718), Expect = 7.790e-88
Identity = 150/261 (57.47%), Postives = 182/261 (69.73%), Query Frame = 1
Query:   16 GRLLGGSSLEYNAEA-QGKFLVGTEQGIVVQINTR-KKGKAPAETKDVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            G +LGGSSLE+N EA   K+LVGTEQG+V+ +N R KK        D GAGKHHGPIY IQRNLTH KFF+TVGDW+A+IW ED KTP++TT Y  +YLTGGCWSPTR GVF+ TRMDG +D+WD ++RQ  VAYSHKV D  L+ I+V  +P G   +  AVGD +GTV+LLE  DSLA  QP+EK  I +ML+RE  +EKNL  R +EL                   DGKD+ MEE LRKVDADFL MIK AE++E +
Sbjct:  316 GSILGGSSLEFNQEAGPTKYLVGTEQGVVLGVNLRNKKTNNGVTVYDTGAGKHHGPIYAIQRNLTHSKFFLTVGDWTARIWMEDLKTPIMTTKYHGAYLTGGCWSPTRTGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDEQLSSIAVS-APYG---REVAVGDINGTVSLLELCDSLARQQPNEKQAILNMLERETKQEKNLEAREKELRRARKEKDDADKRRASDKKDGKDEKMEELLRKVDADFLQMIKEAEDDESK 572          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A7S2FI35_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FI35_9STRA)

HSP 1 Score: 280 bits (715), Expect = 2.600e-87
Identity = 146/261 (55.94%), Postives = 180/261 (68.97%), Query Frame = 1
Query:   16 GRLLGGSSLEYNAEA-QGKFLVGTEQGIVVQINTRKKGKAPAETK-DVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            G +LGGSS+ YN EA   K+L+GTEQGIV+ +N + K +    T  D G GKHHGPIY I+RN TH KFFMTVGDW+A+IW ED KTP++TT Y  +YLT GCWSPTR GVF+ TRMDG +D+WD ++RQ  VAYSHKV D  L+CI+V        G+L +VGD  GTV+LLE  +SLA PQ +EK  IS+M DRE  +EKNL  R R+L+                  DGKD+ MEE LRKVDADFLAMIK AE++E +
Sbjct:  318 GMVLGGSSMTYNTEAGPTKYLIGTEQGIVLGVNLKSKKQNNGITVYDSGPGKHHGPIYAIERNPTHNKFFMTVGDWTARIWFEDTKTPIMTTKYHSAYLTSGCWSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDQELSCIAVSNQA----GRLVSVGDVKGTVSLLEVCESLAAPQANEKTAISNMFDRETKQEKNLEVRERDLKRAKAAEAEARNRESADKKDGKDEKMEELLRKVDADFLAMIKEAEDDESK 574          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A067CMM6_SAPPC (Uncharacterized protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CMM6_SAPPC)

HSP 1 Score: 279 bits (713), Expect = 5.170e-87
Identity = 145/266 (54.51%), Postives = 182/266 (68.42%), Query Frame = 1
Query:    1 LKDPSGRLLGGSSLEYNAEA-QGKFLVGTEQGIVVQINTRK-KGKAPAETKDVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            L D  G++LGGSS+EYN EA   K+LVGTEQGIV+ +N R  K        D GAGKHHGPIY +QRN TH KFF+T+GDW+A++W ED KTP+++T Y  SY+T GCWSPTR GVF+ TRMDG +DVWD ++RQ   AYSHKV D PL+ I+VQG+ Q GG KL AVGD++G ++LLE SD LA PQ +EK  I+ M +RE  REKNL  R +E +                    KD+ MEE LR VDA+FL MIK AE+ E++
Sbjct:  309 LSDKDGQVLGGSSMEYNTEAGPTKYLVGTEQGIVLSVNLRNIKQNNGITVYDTGAGKHHGPIYTVQRNPTHNKFFLTIGDWTARVWCEDLKTPIMSTTYHDSYVTAGCWSPTRAGVFFVTRMDGVVDVWDFFYRQNVAAYSHKVGDVPLSSIAVQGNAQSGG-KLVAVGDSNGMISLLEVSDGLASPQSNEKAAINGMFERETKREKNLEAREKEQKRKKATMDDGKVEELPST---KDEKMEELLRSVDANFLNMIKEAEDTENK 570          
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Match: A0A2D4CF06_PYTIN (Uncharacterized protein n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4CF06_PYTIN)

HSP 1 Score: 278 bits (711), Expect = 1.280e-86
Identity = 147/266 (55.26%), Postives = 179/266 (67.29%), Query Frame = 1
Query:    1 LKDPSGRLLGGSSLEYNAEA-QGKFLVGTEQGIVVQINTRK-KGKAPAETKDVGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARSYLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCISVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDREAAREKNLSQRARELEXXXXXXXXXXXXXXXXGADGKDDAMEETLRKVDADFLAMIKAAEEEEDR 792
            L D  G   GGSS+EYN EA   K+LVGTEQG+V+ IN R  K        D GAGKHHGPIY IQRN TH KFFMT+GDW+A++W ED KTP+++T Y  SY+T GCWSPTR GVF+ TRMDG +D+WD ++RQ  VAYSHKV D  L+ ISVQG+   GG KL AVGD +G ++L+E SD LA  QP+EK  I+ M +RE  REKNL   A+E E                G+  KDD MEE LR VDA+FL MIK AE+ E++
Sbjct:  309 LHDKDGLSFGGSSMEYNTEAGPTKYLVGTEQGVVLSINLRNAKQNNGITVYDTGAGKHHGPIYSIQRNPTHNKFFMTIGDWTARLWCEDLKTPIMSTAYHDSYVTAGCWSPTRAGVFFVTRMDGVVDIWDFFYRQNEVAYSHKVGDVALSAISVQGNASSGG-KLFAVGDVNGMISLMELSDGLATLQPNEKAAINGMFERETKREKNLE--AKEKEMKRRKAMAEEGKHEDNGSSHKDDKMEELLRTVDANFLGMIKEAEDSENK 571          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78840.18522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812NWK4_9DINO3.380e-10060.90ODA6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A5A8CAV3_CAFRO1.420e-9963.88Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S1G3Z1_9STRA1.690e-9659.54Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2QVY7_9STRA5.090e-9263.22Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A6V1SU02_HETAK6.950e-9159.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LH57_ECTSI1.670e-8858.02Putative, Dynein intermediate chain n=1 Tax=Ectoca... [more]
A0A7S2FLW6_9STRA7.790e-8857.47Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2FI35_9STRA2.600e-8755.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A067CMM6_SAPPC5.170e-8754.51Uncharacterized protein n=10 Tax=Saprolegniaceae T... [more]
A0A2D4CF06_PYTIN1.280e-8655.26Uncharacterized protein n=3 Tax=Pythium TaxID=4797... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78840contigM-pyrifera_M_contig78840:2..793 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.2
Seed ortholog evalue1.6e-74
Seed eggNOG ortholog157072.XP_008864448.1
Preferred nameDNAI2
KEGG koko:K11143
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001539,GO:0001578,GO:0003008,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005886,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007320,GO:0007368,GO:0007389,GO:0007600,GO:0007605,GO:0007618,GO:0007620,GO:0008150,GO:0009605,GO:0009612,GO:0009628,GO:0009799,GO:0009855,GO:0009897,GO:0009986,GO:0009987,GO:0010996,GO:0015630,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019953,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0030425,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036126,GO:0036157,GO:0036158,GO:0036477,GO:0040011,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044782,GO:0045503,GO:0045504,GO:0046692,GO:0048609,GO:0048856,GO:0048870,GO:0050877,GO:0050896,GO:0050954,GO:0051179,GO:0051674,GO:0051704,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0071944,GO:0097014,GO:0097223,GO:0097447,GO:0097458,GO:0097729,GO:0098552,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG1587@1,KOG1587@2759
Ec32 ortholog descriptionputative, Dynein intermediate chain
Ec32 orthologEc-24_000630.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons1
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816691.3303764-CDS-M-pyrifera_M_contig78840:1..7931622816691.3303764-CDS-M-pyrifera_M_contig78840:1..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78840 2..793 +
1692278122.3031387-CDS-M-pyrifera_M_contig78840:1..7931692278122.3031387-CDS-M-pyrifera_M_contig78840:1..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78840 2..793 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78840.18522.1prot_M-pyrifera_M_contig78840.18522.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78840 2..793 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78840.18522.1

>prot_M-pyrifera_M_contig78840.18522.1 ID=prot_M-pyrifera_M_contig78840.18522.1|Name=mRNA_M-pyrifera_M_contig78840.18522.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
LKDPSGRLLGGSSLEYNAEAQGKFLVGTEQGIVVQINTRKKGKAPAETKD
VGAGKHHGPIYDIQRNLTHPKFFMTVGDWSAKIWSEDQKTPLITTPYARS
YLTGGCWSPTRPGVFYTTRMDGTMDVWDIYHRQTAVAYSHKVSDFPLTCI
SVQGSPQGGGGKLTAVGDASGTVALLEASDSLALPQPHEKGVISSMLDRE
AAREKNLSQRARELELRAKRAEQAAARAAEAGADGKDDAMEETLRKVDAD
FLAMIKAAEEEEDR
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mRNA from alignment at M-pyrifera_M_contig78840:2..793+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78840.18522.1 ID=mRNA_M-pyrifera_M_contig78840.18522.1|Name=mRNA_M-pyrifera_M_contig78840.18522.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig78840:2..793+ (Macrocystis pyrifera P11B4 male)
TTGAAGGACCCTTCTGGTCGTTTGTTGGGTGGGTCTTCGCTCGAGTACAA TGCTGAGGCGCAGGGCAAATTTTTGGTTGGAACGGAGCAAGGCATTGTTG TGCAGATCAACACTCGCAAGAAAGGCAAGGCTCCTGCTGAGACCAAAGAC GTTGGCGCTGGGAAACACCATGGCCCCATTTACGACATTCAACGCAACCT CACGCACCCCAAGTTCTTCATGACCGTTGGCGACTGGTCCGCCAAGATCT GGAGTGAGGACCAAAAAACGCCGCTCATCACCACCCCGTACGCTCGCTCC TACCTCACTGGAGGCTGCTGGTCGCCCACTCGACCAGGAGTCTTCTACAC CACGCGCATGGATGGTACCATGGATGTGTGGGACATTTACCACCGCCAGA CCGCTGTGGCTTACTCCCACAAGGTCTCCGATTTCCCTCTCACGTGCATC TCTGTGCAAGGCAGTCCGCAGGGCGGAGGCGGCAAGCTGACGGCTGTGGG AGATGCCTCTGGTACCGTTGCTTTGCTCGAAGCCTCCGATTCCCTAGCCC TGCCTCAGCCCCACGAAAAAGGAGTCATTTCTTCCATGCTCGACAGAGAA GCAGCACGAGAAAAGAACCTCTCCCAGCGTGCCAGGGAGCTTGAACTCCG GGCAAAGCGAGCAGAGCAAGCAGCTGCCAGGGCAGCAGAGGCAGGTGCTG ACGGAAAAGACGATGCCATGGAAGAGACGCTCCGCAAAGTTGACGCAGAT TTCCTCGCCATGATCAAGGCCGCCGAGGAGGAGGAGGACCGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78840:2..793+

>mRNA_M-pyrifera_M_contig78840.18522.1 ID=mRNA_M-pyrifera_M_contig78840.18522.1|Name=mRNA_M-pyrifera_M_contig78840.18522.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig78840:2..793+ (Macrocystis pyrifera P11B4 male)
TTGAAGGACCCTTCTGGTCGTTTGTTGGGTGGGTCTTCGCTCGAGTACAA
TGCTGAGGCGCAGGGCAAATTTTTGGTTGGAACGGAGCAAGGCATTGTTG
TGCAGATCAACACTCGCAAGAAAGGCAAGGCTCCTGCTGAGACCAAAGAC
GTTGGCGCTGGGAAACACCATGGCCCCATTTACGACATTCAACGCAACCT
CACGCACCCCAAGTTCTTCATGACCGTTGGCGACTGGTCCGCCAAGATCT
GGAGTGAGGACCAAAAAACGCCGCTCATCACCACCCCGTACGCTCGCTCC
TACCTCACTGGAGGCTGCTGGTCGCCCACTCGACCAGGAGTCTTCTACAC
CACGCGCATGGATGGTACCATGGATGTGTGGGACATTTACCACCGCCAGA
CCGCTGTGGCTTACTCCCACAAGGTCTCCGATTTCCCTCTCACGTGCATC
TCTGTGCAAGGCAGTCCGCAGGGCGGAGGCGGCAAGCTGACGGCTGTGGG
AGATGCCTCTGGTACCGTTGCTTTGCTCGAAGCCTCCGATTCCCTAGCCC
TGCCTCAGCCCCACGAAAAAGGAGTCATTTCTTCCATGCTCGACAGAGAA
GCAGCACGAGAAAAGAACCTCTCCCAGCGTGCCAGGGAGCTTGAACTCCG
GGCAAAGCGAGCAGAGCAAGCAGCTGCCAGGGCAGCAGAGGCAGGTGCTG
ACGGAAAAGACGATGCCATGGAAGAGACGCTCCGCAAAGTTGACGCAGAT
TTCCTCGCCATGATCAAGGCCGCCGAGGAGGAGGAGGACCGATTGAAGGA
CCCTTCTGGTCGTTTGTTGGGTGGGTCTTCGCTCGAGTACAATGCTGAGG
CGCAGGGCAAATTTTTGGTTGGAACGGAGCAAGGCATTGTTGTGCAGATC
AACACTCGCAAGAAAGGCAAGGCTCCTGCTGAGACCAAAGACGTTGGCGC
TGGGAAACACCATGGCCCCATTTACGACATTCAACGCAACCTCACGCACC
CCAAGTTCTTCATGACCGTTGGCGACTGGTCCGCCAAGATCTGGAGTGAG
GACCAAAAAACGCCGCTCATCACCACCCCGTACGCTCGCTCCTACCTCAC
TGGAGGCTGCTGGTCGCCCACTCGACCAGGAGTCTTCTACACCACGCGCA
TGGATGGTACCATGGATGTGTGGGACATTTACCACCGCCAGACCGCTGTG
GCTTACTCCCACAAGGTCTCCGATTTCCCTCTCACGTGCATCTCTGTGCA
AGGCAGTCCGCAGGGCGGAGGCGGCAAGCTGACGGCTGTGGGAGATGCCT
CTGGTACCGTTGCTTTGCTCGAAGCCTCCGATTCCCTAGCCCTGCCTCAG
CCCCACGAAAAAGGAGTCATTTCTTCCATGCTCGACAGAGAAGCAGCACG
AGAAAAGAACCTCTCCCAGCGTGCCAGGGAGCTTGAACTCCGGGCAAAGC
GAGCAGAGCAAGCAGCTGCCAGGGCAGCAGAGGCAGGTGCTGACGGAAAA
GACGATGCCATGGAAGAGACGCTCCGCAAAGTTGACGCAGATTTCCTCGC
CATGATCAAGGCCGCCGAGGAGGAGGAGGACCGA
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