mRNA_M-pyrifera_M_contig78836.18521.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78836.18521.1
Unique NamemRNA_M-pyrifera_M_contig78836.18521.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: G4TCR9_SERID (ATP-dependent DNA helicase PIF1 n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TCR9_SERID)

HSP 1 Score: 209 bits (531), Expect = 4.880e-60
Identity = 113/244 (46.31%), Postives = 161/244 (65.98%), Query Frame = 1
Query:    1 LSSEQRGVLGLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGN-ARKPFGGLQLIMCGDFFQLPPVGLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPFPA---HGTTLFPRNADVD 720
            LS++Q+ +L + +EGK++FFTGSAGTGKS LLRR+++ LRSKYS +       +++TA TG+AACN+GGVT+ SFAG+G G G   +L  +++ +  A  RW + +VL+IDE+SML+G    KL+  AR  R N A KPFGG+QL++ GDFFQLPPV      +FAF A  W   +  + NLT+VFRQKD++ + +LN +R G    +I ++  +    L+ + P P      T LFPR  DVD
Sbjct:  182 LSTQQKNILSVVMEGKNVFFTGSAGTGKSVLLRRIIKELRSKYSKSQD----VIAITASTGIAACNIGGVTLHSFAGVGLGAGTPAELAAKIKKNQKASSRWSRTKVLIIDEISMLEGDFFDKLEKTARIVRRNHADKPFGGIQLVLTGDFFQLPPVTKGSSPKFAFNAESWSSCLHHTFNLTKVFRQKDQAFVDILNEMRRG----IISDSAAK--VFLARSGPLPVDEIEPTELFPRREDVD 415          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: A0A8H3TUW7_9TREE (ATP-dependent DNA helicase PIF1 n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TUW7_9TREE)

HSP 1 Score: 207 bits (527), Expect = 2.530e-59
Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1
Query:    1 LSSEQRGVLGLALE-GKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPVGLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGS 609
            LS+EQ+ VL + LE GK++FFTGSAGTGKS LLR ++ ALR KY+    G   +++VTA TG+AACN+GG+T+ SFAGIG G G+V  L   VR +  A  RW K RVL+IDEVSM+DG L  KL+ V +  R    KPFGG+QL++ GDFFQLPPV       F FEA  WE+A+  S+NLT+VFRQ+DE+ +++LN +R G+
Sbjct:  178 LSTEQQQVLSMVLEKGKNIFFTGSAGTGKSVLLREIIAALRKKYA----GKEDSIAVTASTGMAACNIGGMTIHSFAGIGLGTGNVEQLCSTVRRNKKALNRWLKARVLIIDEVSMVDGELFDKLNKVGQKLRKKL-KPFGGIQLVVTGDFFQLPPVNKGGEPNFVFEAETWEEAIDKSINLTKVFRQRDETFVKMLNEMRFGT 376          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: A0A8H4A8B1_GIGMA (ATP-dependent DNA helicase PIF1 n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4A8B1_GIGMA)

HSP 1 Score: 204 bits (518), Expect = 4.030e-58
Identity = 121/246 (49.19%), Postives = 162/246 (65.85%), Query Frame = 1
Query:    1 LSSEQRGVLGLA-LEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPVGL--RKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPFPAHG---TTLFPRNADVD 720
            L++EQR V  LA L+ +S+FFTGSAGTGKS LL++++ AL+   S+       AV+VTA TGLAA N+GG T+  FAGIG G G + +L ++VR +  ARQRW  C VL+IDE+SMLDG L   L+A+AR  + N R PFGG+QLI+ GDFFQLPP+    R  A+F+FEA  W+ AV  ++ LTRVFRQKD  LI +LN +R G       E + +    L +   +P  G   T L+PRN +V+
Sbjct:  185 LTAEQREVYELAVLKRESIFFTGSAGTGKSMLLQKIITALKDMISNE------AVAVTATTGLAALNIGGTTLHYFAGIGLGQGTIQELTKKVRDNKSARQRWIDCNVLIIDEISMLDGDLFDTLEAIARNIKNNTR-PFGGIQLIITGDFFQLPPISKDNRCVAKFSFEARTWKTAVKHTIQLTRVFRQKDNELIELLNEMRTGKVSDRFSELIAR----LENEPNYPDDGIKPTELYPRNDNVN 419          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: A0A0D7BMU1_9AGAR (ATP-dependent DNA helicase PIF1 n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BMU1_9AGAR)

HSP 1 Score: 202 bits (515), Expect = 4.280e-58
Identity = 119/246 (48.37%), Postives = 152/246 (61.79%), Query Frame = 1
Query:    1 LSSEQRGVLGLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPVGLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPFPAH------GTTLFPRNADVD 720
            LS EQ+ V  L L GKS+F+TGSAGTGKS LLR ++ AL+ KY+ +P     AV++TA TG+AACN+GGVTV SFAG+G        L  +VR +  A  RW++ +VL+IDEVSM+DG    KL  V    R N  KPFGG+QLI+ GDFFQLPPV      +FAFEA +W+ A+ +  NLT+VFRQ DE+ I++LN +R G         L+Q           P H       T LFPR  DVD
Sbjct:  131 LSEEQKYVKSLVLSGKSIFYTGSAGTGKSVLLRDIITALKQKYARSPD----AVAITASTGIAACNIGGVTVHSFAGVGIAVEPADVLASKVRKNQKAAGRWQRTKVLIIDEVSMVDGDFFDKLSQVGSKIRRN-EKPFGGIQLIVTGDFFQLPPVMKGGTPKFAFEAKLWKQAIELEFNLTKVFRQSDETFIQMLNEMRFGR--------LSQESIARFKALSRPVHYEDGLEPTELFPRREDVD 363          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: A0A8H8MYF2_9AGAM (ATP-dependent DNA helicase PIF1 n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MYF2_9AGAM)

HSP 1 Score: 203 bits (516), Expect = 6.810e-58
Identity = 118/240 (49.17%), Postives = 150/240 (62.50%), Query Frame = 1
Query:    1 LSSEQRGVLGLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPVGLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPFPAHGTTLFPRNADVD 720
            LS EQ  +L L  EGK++FFTGSAGTGKS LLR +++ALR K+  +      AV++TA TG+AACN+GG T+ SF+GIG G+G    L  +++ +  A  RW +CRVL+IDEVSMLDG L  +L  VA   + N  KPFGG+QLI+ GDFFQLPPV      +FAFEA  W + V  + NLT+VFRQKD   + +LN +R G   P    T    H L           T LFPR  DVD
Sbjct:  171 LSYEQSQILQLVKEGKNIFFTGSAGTGKSVLLREIIKALRKKHGKSQD----AVAITASTGIAACNIGGQTLHSFSGIGIGEGTPEALSTKIKKNKNALSRWLRCRVLIIDEVSMLDGDLFDRLARVACLIKKN-NKPFGGIQLIVTGDFFQLPPVMKNGQPKFAFEAEKWSECVERTFNLTKVFRQKDPRFVDMLNEMRFGRLTPASIRTF---HELARPIDDGDIDATELFPRREDVD 402          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: B6K513_SCHJY (ATP-dependent DNA helicase PIF1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K513_SCHJY)

HSP 1 Score: 205 bits (522), Expect = 8.820e-58
Identity = 118/243 (48.56%), Postives = 163/243 (67.08%), Query Frame = 1
Query:    1 LSSEQRGVLGLALEGK-SLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPV-GLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPFPAH-GTTLFPRNADVD 720
            LS EQR VL + ++ + S+FFTGSAGTGKS LLR++++ L++++ S P      V+VTA TGLAACN+GGVT+ SFAGIG G     DL++++R +    QRW + RVLVIDEVSM+D  LL KL+ +AR  R N R PFGG+QL++ GDFFQLPPV    K A+F FE+  WE A+  ++ LT VFRQKDE  +++LN +R+G    L  E++ + H L  +         T LFP  ++V+
Sbjct:  311 LSEEQRRVLEMVVDKRHSVFFTGSAGTGKSVLLRKIIKTLKTRFHSDPD----RVAVTASTGLAACNIGGVTLHSFAGIGLGKDSAVDLVKKIRKNKKCMQRWLRTRVLVIDEVSMVDAELLDKLEEIARILRNNGR-PFGGIQLVLTGDFFQLPPVPDSGKEARFCFESKTWESALDYTICLTHVFRQKDEGFVKILNELRLGK---LSRESIQKFHSLSRNIRYEDGLLPTELFPTRSEVE 545          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: A0A8H6Z6T2_9AGAR (ATP-dependent DNA helicase PIF1 n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Z6T2_9AGAR)

HSP 1 Score: 202 bits (513), Expect = 1.000e-57
Identity = 120/244 (49.18%), Postives = 159/244 (65.16%), Query Frame = 1
Query:    1 LSSEQRGVLGLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPVGLRKGA---QFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPFPAHGTT-LFPRNADVD 720
            LS EQ  +L LA EGKSLF+TGSAGTGKS LLR +++ LR K+  A      AV++TA TG+AACN+GGVT+ SFAGIG G     +L R++R +  A  RW + +VL+IDEVSMLDG L  KL  +    R + + PFGG+QLI+ GDFFQLPPV   KG+   +FAFEA +W+ A+  + NLT+VFRQ D+  + +LN +R G    L ++++N+   L          G T LFPR  DVD
Sbjct:  137 LSQEQNQILKLAQEGKSLFYTGSAGTGKSVLLREIIKTLRKKHIKATD----AVAITASTGIAACNIGGVTIHSFAGIGLGIEDAEELARKIRKNKKASSRWMRTKVLIIDEVSMLDGDLFDKLSRIGSILRKSIQ-PFGGIQLIVTGDFFQLPPV--TKGSSSVKFAFEADLWKQAIARTFNLTKVFRQHDQEFVNMLNEMRFGK---LSDKSVNKFRTLSRPIYYDDGLGPTELFPRREDVD 370          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: X8J0V5_9AGAM (ATP-dependent DNA helicase PIF1 n=3 Tax=Rhizoctonia solani TaxID=456999 RepID=X8J0V5_9AGAM)

HSP 1 Score: 202 bits (514), Expect = 1.330e-57
Identity = 118/243 (48.56%), Postives = 152/243 (62.55%), Query Frame = 1
Query:    1 LSSEQRGVLGLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPVGLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPFPAHG---TTLFPRNADVD 720
            LS EQ  +L +  +G ++FFTGSAGTGKS LLR +++ALR K+  A      AV++TA TG+AACN+GGVT+ SF GIG G+G    L  +VR +  A  RW +C+VL+IDEVSMLDG L  +L  VA   R  + KPFGG+QLI+ GDFFQLPPV      +FAFEA  W + V  + NL++VFRQKD   + +LN +R G   P    T  +       + P P  G   T LFPR  DVD
Sbjct:  175 LSYEQSQILDIVKKGSNIFFTGSAGTGKSVLLREIIKALRKKHGKAQD----AVAITASTGIAACNIGGVTLHSFGGIGIGEGSPESLAMKVRKNKNALARWLRCKVLIIDEVSMLDGDLFDRLARVACIVR-KSPKPFGGIQLIVTGDFFQLPPVVKGGQPKFAFEAEKWSECVERTFNLSKVFRQKDPRFVDMLNEMRFGRLTPASTRTFYE------LSRPIPDDGIQATELFPRREDVD 406          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: A0A3A2ZL16_9EURO (ATP-dependent DNA helicase PIF1 n=1 Tax=Aspergillus sclerotialis TaxID=2070753 RepID=A0A3A2ZL16_9EURO)

HSP 1 Score: 204 bits (518), Expect = 1.680e-57
Identity = 118/245 (48.16%), Postives = 155/245 (63.27%), Query Frame = 1
Query:    1 LSSEQRGVL-GLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPV--GLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHPLIEETLNQNHCLLSSTTPF--PAHGTTLFPRNADVD 720
            LS EQRGVL  +A +GKS+FFTGSAGTGKS L+R ++  LR KY          V++TA TGLAACN+ GVT+ SFAGIG G   V +L+++++ +  AR RW + ++L+IDEVSM+DG L  KL+ +AR  R N R PFGG+QL++ GDFFQLPPV  G  + A+FAF A  W   +  ++ LT VFRQKD     +LN +R+G   P   E   Q    LS    F      T LFP  A+V+
Sbjct:  243 LSDEQRGVLEAVANQGKSIFFTGSAGTGKSVLMREIISTLRKKYDREKD----RVAITASTGLAACNIEGVTLHSFAGIGLGKDPVPELVKKIKRNQKARNRWLRTKILIIDEVSMVDGDLFDKLEEIARRIRNNGR-PFGGIQLVVTGDFFQLPPVPEGNNREAKFAFSAATWNTCIQHTILLTHVFRQKDPQFAEMLNEMRLGKISPRTIEAFKQ----LSRPLDFHDSLEATELFPTRAEVE 478          
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Match: A8PUE9_MALGO (ATP-dependent DNA helicase PIF1 n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8PUE9_MALGO)

HSP 1 Score: 200 bits (508), Expect = 2.110e-57
Identity = 114/244 (46.72%), Postives = 153/244 (62.70%), Query Frame = 1
Query:    1 LSSEQRGVL-GLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGGGGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQRWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDFFQLPPVGLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIRVGSQHP---LIEETLNQNHCLLSSTTPFPAHGTTLFPRNADVD 720
            LS EQ+ VL  +  + KS+FFTGSAG GKS+LLR++++ L  KYS +PG    AV++TA TG+AACN+GG+T+ SF+G+G G G    L+R VR +     RW+K  VLVIDEVSM+D +L  KLD VAR  R  + +PFGG+Q++M GDFFQLPPV       F FE+PVW   +    NLT VFRQ+D++ + +LN +R G   P    I   L +   L    TP     T L+    DV+
Sbjct:   84 LSREQQSVLEAVVKQEKSVFFTGSAGAGKSYLLRQIIQDLHVKYSKSPG----AVAITASTGIAACNIGGITLHSFSGVGVGTGTPDQLVRTVRRNRPTVTRWKKTAVLVIDEVSMIDPKLFEKLDHVARVIR-QSNRPFGGIQVVMSGDFFQLPPVSPNGQTSFVFESPVWSSVIQQKFNLTEVFRQRDQTFVNMLNDMRYGKLAPETIRIFSQLERTPSLPEGITP-----TELYALRRDVE 317          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78836.18521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4TCR9_SERID4.880e-6046.31ATP-dependent DNA helicase PIF1 n=1 Tax=Serendipit... [more]
A0A8H3TUW7_9TREE2.530e-5954.41ATP-dependent DNA helicase PIF1 n=1 Tax=Naganishia... [more]
A0A8H4A8B1_GIGMA4.030e-5849.19ATP-dependent DNA helicase PIF1 n=1 Tax=Gigaspora ... [more]
A0A0D7BMU1_9AGAR4.280e-5848.37ATP-dependent DNA helicase PIF1 n=1 Tax=Cylindroba... [more]
A0A8H8MYF2_9AGAM6.810e-5849.17ATP-dependent DNA helicase PIF1 n=2 Tax=Ceratobasi... [more]
B6K513_SCHJY8.820e-5848.56ATP-dependent DNA helicase PIF1 n=1 Tax=Schizosacc... [more]
A0A8H6Z6T2_9AGAR1.000e-5749.18ATP-dependent DNA helicase PIF1 n=1 Tax=Mycena san... [more]
X8J0V5_9AGAM1.330e-5748.56ATP-dependent DNA helicase PIF1 n=3 Tax=Rhizoctoni... [more]
A0A3A2ZL16_9EURO1.680e-5748.16ATP-dependent DNA helicase PIF1 n=1 Tax=Aspergillu... [more]
A8PUE9_MALGO2.110e-5746.72ATP-dependent DNA helicase PIF1 n=1 Tax=Malassezia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78836contigM-pyrifera_M_contig78836:260..979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score211.8
Seed ortholog evalue3.4e-52
Seed eggNOG ortholog65672.G4TCR9
Preferred namePIF1
KEGG koko:K03507,ko:K15255
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0000166,GO:0000228,GO:0000278,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000727,GO:0000733,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003697,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004857,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0005720,GO:0005724,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0007049,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010521,GO:0010556,GO:0010558,GO:0010605,GO:0010638,GO:0010639,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017116,GO:0019219,GO:0019222,GO:0019439,GO:0022402,GO:0022616,GO:0030234,GO:0030554,GO:0030894,GO:0031090,GO:0031297,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031933,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032042,GO:0032200,GO:0032204,GO:0032205,GO:0032210,GO:0032211,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033043,GO:0033044,GO:0033260,GO:0033553,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0035639,GO:0035861,GO:0036094,GO:0042592,GO:0042623,GO:0043086,GO:0043137,GO:0043138,GO:0043139,GO:0043140,GO:0043141,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043504,GO:0043596,GO:0043601,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0044806,GO:0045005,GO:0045934,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051276,GO:0051338,GO:0051348,GO:0051716,GO:0051880,GO:0051972,GO:0051974,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071932,GO:0080090,GO:0090304,GO:0090305,GO:0090734,GO:0097159,GO:0097367,GO:0098687,GO:0098772,GO:0140097,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576,GO:1902296,GO:1902319,GO:1902377,GO:1902969,GO:1902983,GO:1903047,GO:1903469,GO:1904356,GO:1904357,GO:1905465,GO:1905467,GO:1990518,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2001251,GO:2001252
EggNOG free text desc.DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability
EggNOG OGs22E20@155619,38G42@33154,3H4V2@355688,3NTY9@4751,3UZ8X@5204,COG0507@1,KOG0987@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032
Exons1
Model size720
Cds size720
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816691.2928646-CDS-M-pyrifera_M_contig78836:259..9791622816691.2928646-CDS-M-pyrifera_M_contig78836:259..979Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78836 260..979 +
1692278122.2862067-CDS-M-pyrifera_M_contig78836:259..9791692278122.2862067-CDS-M-pyrifera_M_contig78836:259..979Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78836 260..979 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78836.18521.1prot_M-pyrifera_M_contig78836.18521.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78836 260..979 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78836.18521.1

>prot_M-pyrifera_M_contig78836.18521.1 ID=prot_M-pyrifera_M_contig78836.18521.1|Name=mRNA_M-pyrifera_M_contig78836.18521.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=240bp
LSSEQRGVLGLALEGKSLFFTGSAGTGKSFLLRRLVEALRSKYSSAPGGG
GGAVSVTAPTGLAACNVGGVTVQSFAGIGKGDGHVGDLIRRVRGDDGARQ
RWRKCRVLVIDEVSMLDGRLLTKLDAVARASRGNARKPFGGLQLIMCGDF
FQLPPVGLRKGAQFAFEAPVWEDAVPISVNLTRVFRQKDESLIRVLNAIR
VGSQHPLIEETLNQNHCLLSSTTPFPAHGTTLFPRNADVD
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mRNA from alignment at M-pyrifera_M_contig78836:260..979+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78836.18521.1 ID=mRNA_M-pyrifera_M_contig78836.18521.1|Name=mRNA_M-pyrifera_M_contig78836.18521.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig78836:260..979+ (Macrocystis pyrifera P11B4 male)
TTGTCTAGCGAGCAAAGAGGAGTATTGGGGTTGGCGTTGGAAGGAAAGAG TTTGTTCTTCACAGGAAGTGCTGGGACTGGGAAGAGTTTTCTATTACGAC GACTTGTGGAAGCTCTGCGTAGCAAGTATTCGAGTGCACCTGGTGGTGGT GGGGGTGCAGTGAGCGTGACAGCACCCACTGGATTGGCAGCCTGTAACGT GGGTGGAGTGACCGTGCAGAGTTTTGCTGGAATTGGGAAAGGAGATGGGC ATGTTGGTGACTTGATCAGGAGGGTGAGAGGGGATGATGGGGCAAGGCAA CGGTGGAGGAAGTGCAGAGTGTTGGTGATTGATGAAGTGTCCATGTTGGA TGGTCGGTTGTTGACAAAGCTTGACGCAGTGGCGAGAGCATCGAGAGGCA ATGCACGGAAGCCTTTTGGTGGATTGCAGTTGATCATGTGCGGGGATTTC TTCCAGCTACCCCCTGTTGGGCTGCGAAAAGGGGCACAATTTGCGTTTGA AGCGCCAGTGTGGGAAGATGCGGTACCAATTAGTGTGAATCTCACTCGAG TGTTTCGGCAGAAAGATGAATCACTCATTCGAGTCTTGAATGCCATCCGA GTTGGCTCACAACACCCTTTGATTGAAGAGACTTTGAACCAAAACCACTG TCTCCTCTCATCTACAACCCCTTTCCCTGCACATGGAACGACCCTCTTTC CCAGAAATGCCGACGTTGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78836:260..979+

>mRNA_M-pyrifera_M_contig78836.18521.1 ID=mRNA_M-pyrifera_M_contig78836.18521.1|Name=mRNA_M-pyrifera_M_contig78836.18521.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1440bp|location=Sequence derived from alignment at M-pyrifera_M_contig78836:260..979+ (Macrocystis pyrifera P11B4 male)
TTGTCTAGCGAGCAAAGAGGAGTATTGGGGTTGGCGTTGGAAGGAAAGAG
TTTGTTCTTCACAGGAAGTGCTGGGACTGGGAAGAGTTTTCTATTACGAC
GACTTGTGGAAGCTCTGCGTAGCAAGTATTCGAGTGCACCTGGTGGTGGT
GGGGGTGCAGTGAGCGTGACAGCACCCACTGGATTGGCAGCCTGTAACGT
GGGTGGAGTGACCGTGCAGAGTTTTGCTGGAATTGGGAAAGGAGATGGGC
ATGTTGGTGACTTGATCAGGAGGGTGAGAGGGGATGATGGGGCAAGGCAA
CGGTGGAGGAAGTGCAGAGTGTTGGTGATTGATGAAGTGTCCATGTTGGA
TGGTCGGTTGTTGACAAAGCTTGACGCAGTGGCGAGAGCATCGAGAGGCA
ATGCACGGAAGCCTTTTGGTGGATTGCAGTTGATCATGTGCGGGGATTTC
TTCCAGCTACCCCCTGTTGGGCTGCGAAAAGGGGCACAATTTGCGTTTGA
AGCGCCAGTGTGGGAAGATGCGGTACCAATTAGTGTGAATCTCACTCGAG
TGTTTCGGCAGAAAGATGAATCACTCATTCGAGTCTTGAATGCCATCCGA
GTTGGCTCACAACACCCTTTGATTGAAGAGACTTTGAACCAAAACCACTG
TCTCCTCTCATCTACAACCCCTTTCCCTGCACATGGAACGACCCTCTTTC
CCAGAAATGCCGACGTTGATTTGTCTAGCGAGCAAAGAGGAGTATTGGGG
TTGGCGTTGGAAGGAAAGAGTTTGTTCTTCACAGGAAGTGCTGGGACTGG
GAAGAGTTTTCTATTACGACGACTTGTGGAAGCTCTGCGTAGCAAGTATT
CGAGTGCACCTGGTGGTGGTGGGGGTGCAGTGAGCGTGACAGCACCCACT
GGATTGGCAGCCTGTAACGTGGGTGGAGTGACCGTGCAGAGTTTTGCTGG
AATTGGGAAAGGAGATGGGCATGTTGGTGACTTGATCAGGAGGGTGAGAG
GGGATGATGGGGCAAGGCAACGGTGGAGGAAGTGCAGAGTGTTGGTGATT
GATGAAGTGTCCATGTTGGATGGTCGGTTGTTGACAAAGCTTGACGCAGT
GGCGAGAGCATCGAGAGGCAATGCACGGAAGCCTTTTGGTGGATTGCAGT
TGATCATGTGCGGGGATTTCTTCCAGCTACCCCCTGTTGGGCTGCGAAAA
GGGGCACAATTTGCGTTTGAAGCGCCAGTGTGGGAAGATGCGGTACCAAT
TAGTGTGAATCTCACTCGAGTGTTTCGGCAGAAAGATGAATCACTCATTC
GAGTCTTGAATGCCATCCGAGTTGGCTCACAACACCCTTTGATTGAAGAG
ACTTTGAACCAAAACCACTGTCTCCTCTCATCTACAACCCCTTTCCCTGC
ACATGGAACGACCCTCTTTCCCAGAAATGCCGACGTTGAT
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