mRNA_M-pyrifera_M_contig7879.18514.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7879.18514.1 vs. uniprot
Match: D8LET6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET6_ECTSI) HSP 1 Score: 426 bits (1095), Expect = 5.380e-126 Identity = 334/817 (40.88%), Postives = 416/817 (50.92%), Query Frame = 1 Query: 1 ALKSRAEYRSYCERICGGDSASVEDTLSLQLERTGSRTGLQYDALAGDAVVGLASISMTLLSRRRLAVNGTVESIGRLLARRMC-EGGVGRGGTGGVFGSNNDLKGGREALKNLAKLMKNLSSVPEAHRRLSSRPILPLITRLWEESRDEATSKLACHVLANLSRSDVHDVRNRLFRSHLAAESKGTCRKTTIMASSGSNGNACTSTLSTSELKHPLYSLAACEAGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXRSINPLG-----RSAAPVRGKKNTDPAGLLDVQQRLRMTPSALWGDRANFADEA--------------EQXXXXXXXXXXGEMEESATTALTSPT--AALNRTPQRGSDSLGDARPVERNRIGCGGNISATGLAASAVSKGDGAETESLLPVGETLAHAASLKRSVVTSNIPLRWQSRVVTLSSLQD--HGGGSRGAPRHSCSVAASGKRRARTKPRLNQRSTKKR---YKTRTDILFFTHGTETNGRPTSESSEWTTSYGEE-------EKAGTTATRLGSGDSGSGAH----EKHLH--GSIGTASSGVXXXXXXXXXXXXXXXXVRPATAPMHSDGKVVMRPLGLGLNDSDRGGG---PPSVVFEPGFSRLRTRRVILDRVYRFTRHEENVN----PASSNNNDEEAFLSQQGSQGCCNSPQLTARPATSPGVFHLTAATSGRSGHDSSSGSRRNAYPNSLQPWKPPLLFQFGKDPGKTGERCTKETIILEPTSPTTHFVFTPASHDLAESRRGGAASVLAEGEIPEKRGPRDEDKIRLDRFQHIPGCSVCRGSLGHVK 2310 A++ RAEYR YCE ICGGD VEDTL+LQL+R G++Y ALAGDAVVGLAS+S+TL SRRRLAVNGTVES+ RLLAR M E G GR KG EA++N+AKL+KNLSSVPEAHRRLS+RP+LPLITRLWEES DEATS+LACHVLANLSRSDV VRNRLF+ HLAAES+ R+T +G+ ++ + ++ ++ AQ G +SAA + ++ D Q RLR+ P+ALWG RA D+ E+ G E S A+ S T + LN R + P ++ G + + GDG + V + AASLKR VT+N+PLRWQSRVV LSSL+D +GG +RG+P + G+R A+ + R QRS + R + + T G N T ES E T+S K G T L S H EK G G + G+ RP+TAPMHSDGKV+MRPLGLG D+ GG PPSVVFEPG SRLRTRR+ILDRVYRFTRH+E P+ S + + +GS +P PA G+ +SSGS +DPGK G +KETIILEPTSPTTHFVF P + +S +EG +D+D+IRLDRFQH+PGC VCRGSLGHVK Sbjct: 1245 AVQDRAEYRGYCESICGGDPFGVEDTLALQLQRP----GVKYAALAGDAVVGLASLSVTLASRRRLAVNGTVESVDRLLARSMAIESGGGR---------EKGSKGDHEAVRNMAKLLKNLSSVPEAHRRLSNRPLLPLITRLWEESPDEATSQLACHVLANLSRSDVPGVRNRLFQLHLAAESE-VVRRTRASGGAGTTPAPIAKQKPSAAVPRQGFAASSTATRAQHGETNSRDDDTVSLSSSVFRRDGFVEGHRYKGNGCTSDAKSAAVLLSQEALRRDARRDAQYRLRLMPAALWGSRARHVDDGCSGGEDGLDVAGIVEKQRTRQTFLTAGLDEASGAVAVESATVTSTLNARHDRHQAKRDGSCPSKQKIGGAAAVVVQPSVGDFDDGGGDGIVFQGTAKVSQ----AASLKRPAVTANVPLRWQSRVVALSSLRDSLNGGATRGSP-------SMGQRMAKARCRARQRSKENRQHEFTSTTACKDMNKGN--NSNETQESKEVTSSDSASPDQRCRPSKIGDTRMTLAEWTSREDVHVPGGEKSTDDSGGCGRGAEGILSLVEGG----------RPSTAPMHSDGKVIMRPLGLGQVDNGVPGGSLEPPSVVFEPGSSRLRTRRIILDRVYRFTRHQEQSTIMGAPSGSTDTNRGTTEFNKGS-----APD----PAPQAGL--------------TSSGSP--------------------EDPGKAGGHFSKETIILEPTSPTTHFVFKPPPRNCVDSEGRVVLEASSEGVRI-----KDDDRIRLDRFQHVPGCMVCRGSLGHVK 1976 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7879.18514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7879.18514.1 >prot_M-pyrifera_M_contig7879.18514.1 ID=prot_M-pyrifera_M_contig7879.18514.1|Name=mRNA_M-pyrifera_M_contig7879.18514.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=770bp ALKSRAEYRSYCERICGGDSASVEDTLSLQLERTGSRTGLQYDALAGDAVback to top mRNA from alignment at M-pyrifera_M_contig7879:392..10725- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7879.18514.1 ID=mRNA_M-pyrifera_M_contig7879.18514.1|Name=mRNA_M-pyrifera_M_contig7879.18514.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10334bp|location=Sequence derived from alignment at M-pyrifera_M_contig7879:392..10725- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7879:392..10725- >mRNA_M-pyrifera_M_contig7879.18514.1 ID=mRNA_M-pyrifera_M_contig7879.18514.1|Name=mRNA_M-pyrifera_M_contig7879.18514.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4620bp|location=Sequence derived from alignment at M-pyrifera_M_contig7879:392..10725- (Macrocystis pyrifera P11B4 male)back to top |