prot_M-pyrifera_M_contig78784.18511.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78784.18511.1
Unique Nameprot_M-pyrifera_M_contig78784.18511.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length72
Homology
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BLAST of mRNA_M-pyrifera_M_contig78784.18511.1 vs. uniprot
Match: A0A813A1V5_9DINO (Rnh1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A1V5_9DINO)

HSP 1 Score: 63.9 bits (154), Expect = 2.820e-10
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0 
Query:    5 EDAQLVQICVDGELGSGQCRALCAALLGRGVGMKDHGYAPLKSMRFWSSGLGDAGAGSIAQVLLGGP 71
            E   + Q+CVD +LG+   RAL AA+LG+G GMK H Y  L+S+RFW +  GDAG  ++A +L  GP
Sbjct:   50 EAEHIQQVCVDSKLGALGTRALAAAVLGKGQGMKSH-YPFLRSLRFWEAETGDAGVAAVAALLKVGP 115
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78784.18511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A813A1V5_9DINO2.820e-1049.25Rnh1 protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78784contigM-pyrifera_M_contig78784:729..944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78784.18511.1mRNA_M-pyrifera_M_contig78784.18511.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78784 729..944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78784.18511.1 ID=prot_M-pyrifera_M_contig78784.18511.1|Name=mRNA_M-pyrifera_M_contig78784.18511.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp
EDAPEDAQLVQICVDGELGSGQCRALCAALLGRGVGMKDHGYAPLKSMRF
WSSGLGDAGAGSIAQVLLGGPS
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