mRNA_M-pyrifera_M_contig78782.18509.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: A0A5A8E1Z6_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E1Z6_CAFRO) HSP 1 Score: 82.8 bits (203), Expect = 1.100e-16 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 7 TLVYLTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLLPSTPASSDGVY 240 T V+LT AA+ +GA CL GTPGAY++RPG G NK+ IH +GGGWC + EDC R+ TNLG++S P+ + G + Sbjct: 40 TAVFLTDAAKSDGAVCLDGTPGAYYFRPGL-PGVNKWYIHHQGGGWCESPEDCLGRSKTNLGSSSKYPAKASLGGGYF 116
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: R1EBC1_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EBC1_EMIHU) HSP 1 Score: 76.6 bits (187), Expect = 4.300e-15 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 10 LVYLTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLLPSTPASSDGVY 240 LV L AAE GA+CL GTPGAY+ R G G+GANK+ IH +GGGWC + +DC R+ LG+++ ST + G Y Sbjct: 45 LVKLKAAAETVGARCLDGTPGAYYIRKGAGTGANKWYIHHQGGGWCESLDDCLRRSKGGLGSSTGYASTTSGMGGGY 121
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: A0A7S3U2D8_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3U2D8_EMIHU) HSP 1 Score: 75.1 bits (183), Expect = 7.060e-14 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 10 LVYLTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGN-TSLLPSTPASSDGVY 240 LV L AAE GA+CL GTPGAY+ R G G+GANK+ IH +GGGWC + +DC R+ LG+ T P+T G + Sbjct: 45 LVKLKAAAETVGARCLDGTPGAYYIRKGAGTGANKWYIHHQGGGWCESLDDCLRRSKGGLGSSTGYAPTTSGMGGGYF 122
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: A0A2R6XL10_MARPO (Pectin acetylesterase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XL10_MARPO) HSP 1 Score: 71.2 bits (173), Expect = 1.720e-12 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 25 KAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLLPSTPASSDGVY--GMMSDNESVN 270 ++A E GA CL G+P AY+ G G GA+K+ +HL GGGWC TA +C R T LG++ +P D +Y GMMS N +VN Sbjct: 87 ESAVELGAVCLDGSPPAYYLDRGSGKGADKWIVHLEGGGWCRTAAECLDRAFTQLGSSRYMP------DEIYLGGMMSSNPAVN 164
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: UPI001F5CF365 (pectin acetylesterase 5-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CF365) HSP 1 Score: 69.3 bits (168), Expect = 8.040e-12 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1 Query: 19 LTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLL 207 L A+E GA CL GTP Y + G G GANK+ +HL GGGWC T EDC +R T LG+++ + Sbjct: 59 LLAGAKEKGAVCLDGTPPGYHLQRGSGDGANKWLVHLEGGGWCSTIEDCSNRRMTALGSSNFM 121
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: A0A1X7TX48_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TX48_AMPQE) HSP 1 Score: 67.8 bits (164), Expect = 1.260e-11 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 1 Query: 46 AKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLLPST 216 A CL G+P Y++RPG GSGANKF +HL GGG C + E+CY R+ T LG++S T Sbjct: 33 AVCLDGSPPGYYFRPGTGSGANKFIVHLEGGGDCESKEECYQRSMTRLGSSSYWAKT 89
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: A0A2P6PBD5_ROSCH (Pectin acetylesterase n=4 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PBD5_ROSCH) HSP 1 Score: 68.2 bits (165), Expect = 1.940e-11 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 1 Query: 13 VYLTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLL 207 + + K A GA CL G+P AY W G+GSG N + +H+ GGGWC +C RT+T LG++ + Sbjct: 11 ITILKTAVARGAVCLDGSPPAYHWDKGFGSGVNNWLVHIEGGGWCHNVTNCLGRTNTRLGSSKKM 75
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: A0A4S8K3Y5_MUSBA (Pectin acetylesterase n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8K3Y5_MUSBA) HSP 1 Score: 67.8 bits (164), Expect = 2.850e-11 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 19 LTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLLPSTPASSDGVYG 243 L + A + GA CL G+P AY + PG+GSG N + +H+ GGGWC +DC SR T G++ + P S G+ G Sbjct: 37 LLEGAVDEGAVCLDGSPPAYHFSPGFGSGMNNWLVHMEGGGWCTNVQDCQSRRDTFRGSSKYMK--PLSFSGILG 109
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: A0A453GXN3_AEGTS (Pectin acetylesterase n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453GXN3_AEGTS) HSP 1 Score: 65.9 bits (159), Expect = 3.190e-11 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 4 MTLVYLTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLL 207 + L+ LT AA+E GA CL GTP Y + G G G++ + IHL+GGGWC T DC +R ++LG++ + Sbjct: 59 VALILLT-AAQEKGAVCLDGTPPGYHLQRGSGDGSSSWHIHLQGGGWCGTVNDCSNRRMSDLGSSKFM 125
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Match: UPI00098E2A8E (pectin acetylesterase 7-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E2A8E) HSP 1 Score: 67.0 bits (162), Expect = 5.090e-11 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 31 AEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTAEDCYSRTSTNLGNTSLL 207 AE GA CL G+P Y + PG+GSGAN + +H+ GGGWC T E+C R S G++ L+ Sbjct: 39 AEAKGAVCLDGSPPVYHFSPGFGSGANNWLVHMEGGGWCSTPEECIDRRSNFRGSSRLM 97 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78782.18509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78782.18509.1 >prot_M-pyrifera_M_contig78782.18509.1 ID=prot_M-pyrifera_M_contig78782.18509.1|Name=mRNA_M-pyrifera_M_contig78782.18509.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp MTLVYLTKAAEENGAKCLSGTPGAYFWRPGWGSGANKFRIHLRGGGWCFTback to top mRNA from alignment at M-pyrifera_M_contig78782:603..872+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78782.18509.1 ID=mRNA_M-pyrifera_M_contig78782.18509.1|Name=mRNA_M-pyrifera_M_contig78782.18509.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig78782:603..872+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78782:603..872+ >mRNA_M-pyrifera_M_contig78782.18509.1 ID=mRNA_M-pyrifera_M_contig78782.18509.1|Name=mRNA_M-pyrifera_M_contig78782.18509.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig78782:603..872+ (Macrocystis pyrifera P11B4 male)back to top |