prot_M-pyrifera_M_contig10008.18.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10008.18.1
Unique Nameprot_M-pyrifera_M_contig10008.18.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length529
Homology
BLAST of mRNA_M-pyrifera_M_contig10008.18.1 vs. uniprot
Match: A0A6H5JT89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT89_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 5.240e-47
Identity = 137/352 (38.92%), Postives = 160/352 (45.45%), Query Frame = 0
Query:  186 EQAERYRQGGRRVRFGRGGRGXXXXXXXXDDGRPIPSAASAGGASTPGWDYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYKAWSPHYMNVKRHGRGVAHEMRPPHPAEDLPPVSRRHLLPWPIEKIDAMEMMGASRAGEEDEAWVQIAAAMSSSISEAKDQWATYCETMRRQRWTMGSRRTMMAARERGAFGWPEPTSSQIVXXXXXXXXXXXPPLRSWVGDEHPTWRYRADSAXXXXXXXXXXXXXXXTTGYSRPAISATEGEAYAAAAAFGGPPG---HPPVIR-----GRCDFCHKFWTTDSPRAAVALQAGRWRCPACESGARSGPMPLHWEDEE 529
            E AERYRQGGR+ RFG  GR           GRP     S+GG   P WD                                         GY+ W            G     R  H     P VSRRHLLPWP+EKI  ME MGA R GE+D+AWV+IAA MSS+I+EAKDQWA YCE MR +RW  GS                        XXXXXXXX   P    W  ++HP+WRYR++                     SR  +   E   Y     +   PG    PP  R     GRC FC + W+TDSP AA A++AGRW CPACESG + GPMP HWEDE+
Sbjct:  580 ELAERYRQGGRKARFGMAGRVGVSSASHGGRGRP----PSSGGG--PPWDASSAVERPLAGGGGRWSEQYWGGHEPRGAMPP---------GYQRWG-----------GTTMVPREQHDLAGPPSVSRRHLLPWPLEKIKEMEAMGAGRGGEDDDAWVRIAARMSSTIAEAKDQWAAYCEMMRHERWMSGSSSAXXXX-------------XXXXXXXXXXXXGAPPGPARWAAEQHPSWRYRSEPTGVSAAAAAAAGYPGGMPPRSR--LPPPEAGPYRQPVGYSVAPGAGPSPPSARPSSVVGRCSFCGEAWSTDSPAAAAAIKAGRWCCPACESGTQPGPMPRHWEDED 890          
BLAST of mRNA_M-pyrifera_M_contig10008.18.1 vs. uniprot
Match: D7G3G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G2_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 3.090e-43
Identity = 123/241 (51.04%), Postives = 144/241 (59.75%), Query Frame = 0
Query:  299 MRPP--HPAEDLPPVSRRHLLPWPIEKIDAMEMMGASRAGEEDEAWVQIAAAMSSSISEAKDQWATYCETMRRQRWTMGSRRTMMAARERGAFGWPEPTSSQIVXXXXXXXXXXXPPLRSWVGDEHPT-WRYRAD-SAXXXXXXXXXXXXXXXTTGYSRPAISA------TEGEAYAAAAAFGGPPGHPPVIRGRCDFCHKFWTTDSPRAAVALQAGRWRCPACESGARSGPMPLHWEDEE 529
            M PP  H     P VSRRHLLPWP+EKI+ ME MGA R GE+DE WV+IAA MSS+I+EAKDQWA YCE MR QRW  GS                        XXXXXXXX   P    W  ++HP+ WRYR++ +    XXXXXXXXXXXX     RP   A       +G + A  A    PP     + GRC FC + W+TDSP AA A++AGRW CPACESG + GPMP HWEDE+
Sbjct:  661 MVPPEQHDLAGPPSVSRRHLLPWPLEKIEEMEAMGAGRGGEDDEDWVRIAARMSSTIAEAKDQWAAYCEMMRHQRWMSGS-------------SXXXXXXXXXXXXXXXXXXGAPPGPARWAAEQHPSSWRYRSEPTGASAXXXXXXXXXXXXXXXXXRPPPEAGPYRQSVQGYSVAPGAGPSPPPARSSSVVGRCSFCGEAWSTDSPAAAAAIKAGRWCCPACESGTQPGPMPRHWEDED 888          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10008.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT89_9PHAE5.240e-4738.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3G2_ECTSI3.090e-4351.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10008contigM-pyrifera_M_contig10008:1305..8479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10008.18.1mRNA_M-pyrifera_M_contig10008.18.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10008 1305..8479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10008.18.1 ID=prot_M-pyrifera_M_contig10008.18.1|Name=mRNA_M-pyrifera_M_contig10008.18.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=529bp
GAGGGGGGSGGCGGGGGDHDKDGGAMASGGGTVGWQTRRPHQREPTAAEP
ISGERGSGGGGGRGGGGRGGHTASPPPYLARTNSNTPSDGGGARGRNPGE
SFRSGSASGVVGQAPGPCPSSSSGPRWDDSDVSGSAGRDRKGDGGGGRLV
SGAIAALPPAPPSPACRPEEPVEQQQHQAQAQAHLEQAERYRQGGRRVRF
GRGGRGGAAAAAAPDDGRPIPSAASAGGASTPGWDYERRGGGGREGGGGR
RWGEHEPEREYWRHAGGGGGGGGAGGGYKAWSPHYMNVKRHGRGVAHEMR
PPHPAEDLPPVSRRHLLPWPIEKIDAMEMMGASRAGEEDEAWVQIAAAMS
SSISEAKDQWATYCETMRRQRWTMGSRRTMMAARERGAFGWPEPTSSQIV
AAGGGGSGGGGPPLRSWVGDEHPTWRYRADSAAAAAAAAAAAAAAAATTG
YSRPAISATEGEAYAAAAAFGGPPGHPPVIRGRCDFCHKFWTTDSPRAAV
ALQAGRWRCPACESGARSGPMPLHWEDEE
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