mRNA_M-pyrifera_M_contig78699.18493.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: G5A8N2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A8N2_PHYSP) HSP 1 Score: 58.5 bits (140), Expect = 2.380e-8 Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 1 FLGALPNYDAVPCSDAPGTCCFGTGLCSAIGHDGCCPAHKRNPFGE---AVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDPCGEFDGTPGSIREKWD-ISHPGEKSSTTRRA 336 F+ +PN D V +G+ +A+GH RN FGE A+G+A WTL+L + D DGDG+++G+E+GDPC E+D + D +S+PG++SST+ ++ Sbjct: 26 FVAKVPNGDNV------------SGV-AAVGHVNVNGGGPRNAFGEDFDAMGQA-------WTLELCEADSDGDGQTNGEELGDPCCEWDQEMANTPLWTDRVSNPGDESSTSDKS 121
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: H3GT11_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GT11_PHYRM) HSP 1 Score: 59.7 bits (143), Expect = 3.190e-8 Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 1 FLGALPNYDAVPCSDAPGTCCFGTGLCSAIGH-DGCCPAHKRNPFGEAVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDPCGEFDGTPGSIREKWD-ISHPGEKSSTT 327 F+ LPN VP D P AIGH DG + N FG+A EA G++ WT++L D DGDG+++G E+GDPC E+D + + D +SHP + S T+ Sbjct: 31 FVAMLPNGGNVP--DTP-----------AIGHPDGTGDSAATNAFGDAFSEA--GNK--WTVELCMADTDGDGQTNGQELGDPCCEWDMDANPVVQWTDGVSHPDDASKTS 124
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: A0A0B6ZUC5_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZUC5_9EUPU) HSP 1 Score: 57.8 bits (138), Expect = 4.160e-8 Identity = 38/87 (43.68%), Postives = 47/87 (54.02%), Query Frame = 1 Query: 1 FLGALPNYDAV--PCSDAPGTCCFGTGLCSAIGHDGCCPAHKRNPFGE---AVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDP 246 F+ +PN D V PCS PGT FG +GH + RNPFGE A G A WT DL + D DGDG+++G E+GDP Sbjct: 20 FINLIPNGDKVTNPCS--PGTVWFG------VGHYNSSGSGPRNPFGEDFAAAGHA-------WTQDLCQKDSDGDGKTNGQELGDP 91
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: A0A6A3Y1C7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Y1C7_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.860e-8 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 1 FLGALPNYDAVPCSDAPGTCCFGTGLCSAIGHDGCCPAHKRNPFG---EAVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDPCGEFDGTPGSIREKWD--ISHPGEKSSTTRRA 336 F+ LPN D V +G+ AIGH RN FG +A+G+A WT+ L + D DGDG+++G+E+GDPC E+D S +W +S+PG+ SST+ ++ Sbjct: 66 FVAKLPNGDNV------------SGV-EAIGHVNVNGGGPRNAFGVDFDAMGQA-------WTMKLCEADSDGDGQTNGEELGDPCCEWDDETAST-PRWTEGVSNPGDDSSTSDKS 161
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: A0A6A3JJK4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3JJK4_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 6.570e-8 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 1 FLGALPNYDAVPCSDAPGTCCFGTGLCSAIGHDGCCPAHKRNPFG---EAVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDPCGEFDGTPGSIREKWD--ISHPGEKSSTTRRA 336 F+ LPN D V +G+ AIGH RN FG +A+G+A WT+ L + D DGDG+++G+E+GDPC E+D S +W +S+PG+ SST+ ++ Sbjct: 87 FVAKLPNGDNV------------SGV-EAIGHVNVNGGGPRNAFGVDFDAMGQA-------WTMKLCEADSDGDGQTNGEELGDPCCEWDDETAST-PRWTEGVSNPGDDSSTSDKS 182
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: A0A7S1P551_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1P551_9ALVE) HSP 1 Score: 59.3 bits (142), Expect = 8.660e-8 Identity = 40/107 (37.38%), Postives = 50/107 (46.73%), Query Frame = 1 Query: 79 CSAIGHDGCCPAHKRNPFGEAVGEARLGDEVV------WTLDLVKGDPDGDGRSSGDEMGDPCGEFDGT----PGSIREKWD-ISHPGEKSSTTRRASCSLVHPSDP 366 C I H C N FG V GD WT L + D DGD +++GDE+GDPC F P IR+ D ISHP E+ TT + SC+ P+ P Sbjct: 39 CRGITHPSCGSGPNFNDFGNDVVSLSCGDVEPLSCVPSWTTALCEKDTDGDLKTNGDELGDPCCVFQSNGGRNPAYIRDATDDISHPSERDDTTPKPSCTFDDPAVP 145
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: A0A0G4H3T9_VITBC (FAD-binding FR-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3T9_VITBC) HSP 1 Score: 59.3 bits (142), Expect = 1.080e-7 Identity = 40/107 (37.38%), Postives = 50/107 (46.73%), Query Frame = 1 Query: 79 CSAIGHDGCCPAHKRNPFGEAVGEARLGDEVV------WTLDLVKGDPDGDGRSSGDEMGDPCGEFDGT----PGSIREKWD-ISHPGEKSSTTRRASCSLVHPSDP 366 C I H C N FG V GD WT L + D DGD +++GDE+GDPC F P IR+ D ISHP E+ TT + SC+ P+ P Sbjct: 41 CRGITHPSCGSGPNFNDFGNDVVSLSCGDVEPLSCVPSWTTALCEKDTDGDLKTNGDELGDPCCVFQSNGGRNPAYIRDATDDISHPSERDDTTPKPSCTFDDPAVP 147
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: A0A7J7JLK9_BUGNE (Uncharacterized protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JLK9_BUGNE) HSP 1 Score: 57.0 bits (136), Expect = 1.480e-7 Identity = 41/108 (37.96%), Postives = 52/108 (48.15%), Query Frame = 1 Query: 1 FLGALPNYDAVP--CSDAPGTCCFGTGLCSAIGHDGCCPAHKRNPFGEAVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDP-C--GEFDGTPGSIREKWDISHPG 309 F +PN D VP C D L +GH RN FG+A G WT DL + D DGDG+++G+E+GDP C E D PG + D+SHPG Sbjct: 24 FQSKIPNGDKVPSPCDD---------NLWGGVGHLVPGGGGVRNSFGKAFGNG-----TSWTKDLCEADSDGDGKTNGEELGDPDCTWSEGDPAPGDVA---DLSHPG 114
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: G4Z4S4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z4S4_PHYSP) HSP 1 Score: 57.8 bits (138), Expect = 1.630e-7 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 1 FLGALPNYDAVPCSDAPGTCCFGTGLCSAIGH-DGCCPAHKRNPFGEAVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDPCGEFDGTPGSIREKWD-ISHPGEKSSTT 327 F+ LPN VP D P AIGH DG + N FG+A EA G++ WT +L D DGDG+++G E+GDPC E+D + + D +SHP + + T+ Sbjct: 31 FVAMLPNGGNVP--DTP-----------AIGHPDGTGDSAATNAFGDAFAEA--GNK--WTTELCMADTDGDGQTNGQELGDPCCEWDMDTNPVVQWTDGVSHPDDATKTS 124
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Match: A0A6A3T6U8_9STRA (ABC transporter domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3T6U8_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.010e-7 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 1 FLGALPNYDAVPCSDAPGTCCFGTGLCSAIGHDGCCPAHKRNPFG---EAVGEARLGDEVVWTLDLVKGDPDGDGRSSGDEMGDPCGEFDGTPGSIREKWD--ISHPGEKSSTTRRA 336 F+ LPN D V +G+ AIGH RN FG +A+G+A WT+ L + D DGDG+++G+E+GDPC E+D S +W +S+PG+ SST+ ++ Sbjct: 711 FVAKLPNGDNV------------SGV-EAIGHVNVNGGGPRNAFGVDFDAMGQA-------WTMKLCEADSDGDGQTNGEELGDPCCEWDDETAST-PRWTEGVSNPGDDSSTSDKS 806 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78699.18493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78699.18493.1 >prot_M-pyrifera_M_contig78699.18493.1 ID=prot_M-pyrifera_M_contig78699.18493.1|Name=mRNA_M-pyrifera_M_contig78699.18493.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp FLGALPNYDAVPCSDAPGTCCFGTGLCSAIGHDGCCPAHKRNPFGEAVGEback to top mRNA from alignment at M-pyrifera_M_contig78699:591..974- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78699.18493.1 ID=mRNA_M-pyrifera_M_contig78699.18493.1|Name=mRNA_M-pyrifera_M_contig78699.18493.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig78699:591..974- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78699:591..974- >mRNA_M-pyrifera_M_contig78699.18493.1 ID=mRNA_M-pyrifera_M_contig78699.18493.1|Name=mRNA_M-pyrifera_M_contig78699.18493.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig78699:591..974- (Macrocystis pyrifera P11B4 male)back to top |