mRNA_M-pyrifera_M_contig78694.18490.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78694.18490.1
Unique NamemRNA_M-pyrifera_M_contig78694.18490.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: A0A7S4ML98_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ML98_9EUKA)

HSP 1 Score: 243 bits (619), Expect = 3.040e-74
Identity = 119/239 (49.79%), Postives = 171/239 (71.55%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKAVIAS-DQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLR--KREGWLEPSPVSSCESDAFGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNAQD 711
            GGH+S+  + + + I+S+A+ K+ +NP P+ FS+ SPF   LE+M P+  NF  K + SN W   P+ A +A+ D   + +VRTT A T++SGG K+NVLPT+  A +NHRIVPGD+VA+V++ D  +INDPRV +   K EG LEPSP+SS  S AF ++  S+++ F  + V+P++ +ANTD+RHYWD+A+DIYRFCPT +  S+LS FHGI+ERI+I NY   I FY++LI+N  D
Sbjct:  261 GGHASLSTKETTVDIVSKAVAKISDNPMPVQFSAASPFHKALEYMGPEFGNFALKAIFSNFWLFDPIIARLATMDSLASVNVRTTAAATMISGGIKSNVLPTKTTAIINHRIVPGDTVASVVQHDIDVINDPRVNVTIVKNEG-LEPSPISSEVSPAFKLLSQSIREVFPGTPVIPSLFVANTDTRHYWDIAKDIYRFCPTKMTPSDLSRFHGIDERISISNYFEFILFYFQLIQNHSD 498          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: CBPS2_DICDI (Probable carboxypeptidase S-like 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=CBPS2_DICDI)

HSP 1 Score: 206 bits (525), Expect = 4.120e-60
Identity = 105/237 (44.30%), Postives = 160/237 (67.51%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNP-HPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPM-KAVIASDQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVSSCESDAFGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNAQ 708
            GGHSSMP + SAIG+L++A++KLENNP  P L  +    R++ + +  +  +  Y+ L SNLW   P+   V+++   +    RTTTA+TI + G KANV+P +A AT+N R+VPGDS   +++    +IND RV++ K    +EP+PVSS  S +F +++ ++ Q F + +V P +MIANTD+RHYW++ E+I+RFCP VL  S+L   HGI+ER+ I NY  +++FYY LI+N +
Sbjct:  285 GGHSSMPRRESAIGVLAQAVSKLENNPPSPKLRET----RLLFDFVGRE-CSLPYRFLFSNLWLFEPIISRVLSTKPTLDALQRTTTALTIFNAGNKANVIPMEANATINFRVVPGDSTNDIIDHVNRVINDDRVKISKISNIIEPAPVSSTTSKSFNLLQSTILQEFPDVVVAPTIMIANTDTRHYWNLTENIFRFCPMVLENSDLQRLHGIDERLTIKNYKQLVDFYYHLIKNTE 516          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: A0A1S3ICY6_LINUN (N-fatty-acyl-amino acid synthase/hydrolase PM20D1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3ICY6_LINUN)

HSP 1 Score: 204 bits (519), Expect = 3.510e-59
Identity = 112/240 (46.67%), Postives = 154/240 (64.17%), Query Frame = 1
Query:    1 PGGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKA-VIASDQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWL--EPSPVSSCESDAFG--IVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNA 705
            PGGHSSMPP  ++IGILS+A+ +LE +PHP LF    P   M+EHMAP M+  G K +M+NLW   P+ +  +AS       VRTTTA+T+ + G K NVLP  A A VNHRI P  S+  V++ D A+IND RVQ++     +  EPSP+S    + FG  I+  SVKQ F +++ VP +++ NTD++HY D+ + +YRF P VL   +    HG NERIA+ N+  +I F+Y LI NA
Sbjct:  272 PGGHSSMPPPETSIGILSKALARLEASPHPDLFGY-GPEAAMMEHMAPHMSFLG-KFVMTNLWLFGPLVSRALASKPATNGQVRTTTAITVFNSGIKDNVLPPVATAYVNHRIHPAQSIQDVIDYDKAVINDERVQIKLSRSVMNREPSPISPTGPEDFGYQIIRSSVKQVFPDAVTVPGILMGNTDTKHYLDLTKSVYRFLPAVLVPEDSKRIHGFNERIAVQNFEQIINFFYHLILNA 509          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: A0A151ZHI6_9MYCE (Peptidase M20 family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZHI6_9MYCE)

HSP 1 Score: 203 bits (516), Expect = 7.120e-59
Identity = 105/237 (44.30%), Postives = 163/237 (68.78%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKAVIASDQFMAPSV-RTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVSSCESDAFGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNAQD 711
            GGHSSMPP+ +AIGILS+A++K+E+NP   +    +  R +++ +  +  +  Y+ + SNLW   P+   I S++    ++ RTTTA+TIV GG K NVLP  A A VN R+ PGD+  +V+    ++I D RV+LR++   L+PSP+S  ES +F +++ ++ Q F +++V  ++MIANTD+R +W + E+I+RFCP +L  S+LS FHGINERI+I NY  +I+FYY LI+N+ +
Sbjct:  276 GGHSSMPPRETAIGILSKALSKIESNP---VTPQTTHSRRIIDFLGRE-ASLPYRFVFSNLWLFEPLIVRIFSNKPTLDALQRTTTAITIVQGGQKPNVLPYHASAIVNFRVAPGDTTESVMNHIRSVIQDDRVKLREQSLSLDPSPISPTESKSFKLLQSTILQEFPDTIVSASLMIANTDTRWFWPLTENIFRFCPLILENSDLSRFHGINERISIKNYKQIIDFYYHLIKNSDN 508          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: UPI000644A84E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A84E)

HSP 1 Score: 202 bits (515), Expect = 1.310e-58
Identity = 105/234 (44.87%), Postives = 156/234 (66.67%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKAVIAS-DQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVSSCESDAFGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRN 702
            GGHSSMPP+++AIGIL++A+ KLE NP P  F+  +   ++L+ +  + T   Y+ + SNLW   P+ + + S +  M P  RTTTAVT+ +GGTK NVLP +A AT+N RI P  SV  +L+     IND R+     E + EPSP+SS +S +F +++ +V Q F   +V P +M+ANTD++ YWD++ +IYRFCP  L  S+L  FHG++ER++  +Y  +++FYY LIRN
Sbjct:  288 GGHSSMPPKNTAIGILAQAVAKLEANPLPAAFNEVA---LLLDFVGREAT-LPYRFVFSNLWLFRPLISYVLSLNPGMDPLQRTTTAVTMFNGGTKPNVLPNEANATINFRISPSQSVQDILDHIKNTINDDRIVTIIPEEFTEPSPISSADSPSFRLIQATVLQEFPEVIVAPGLMVANTDTKWYWDLSNNIYRFCPQELSHSDLKRFHGMDERLSSSDYRQLVDFYYHLIRN 517          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: A0A8J1XGQ3_OWEFU (Ofus.G012326 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XGQ3_OWEFU)

HSP 1 Score: 200 bits (508), Expect = 1.750e-58
Identity = 108/239 (45.19%), Postives = 159/239 (66.53%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKAVIASDQFMAPS-VRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVSSCESDAFGI--VEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNAQD 711
            GGHSSMP + S+IGIL+ AI +LEN+P P +F +  P R + E +AP M   G+K LMSNLW   P+  ++ S +  + + VRTTTAVT    G K+NVL  +A ATVNHR+ PG ++  V+E D  +INDPRV++R  +  +E  PVS  ++ A G   ++ S++Q F  ++V P +MI NTD++HY  ++++IYRF PT +   +L  FHG+NERI++ NY   I +YY L++N+ D
Sbjct:  180 GGHSSMPGKESSIGILANAIARLENSPQPSMFGT-GPERGLFEQLAPHM-KLGFKTLMSNLWLFSPLVTMVLSWKPSSNAMVRTTTAVTEFHAGIKSNVLAPKATATVNHRVHPGQTLQQVIEHDRYVINDPRVEIRTVKS-VEAHPVSPYDTKAKGYQTIKKSIRQVFHKAVVAPGLMIGNTDTKHYLKLSKNIYRFSPTYMYPEDLPRFHGVNERISVKNYEQAINYYYHLMKNSDD 415          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: UPI001F4F1765 (N-fatty-acyl-amino acid synthase/hydrolase PM20D1-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F1765)

HSP 1 Score: 201 bits (511), Expect = 6.240e-58
Identity = 111/236 (47.03%), Postives = 151/236 (63.98%), Query Frame = 1
Query:    7 GHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLW-FSFPMKAVIASDQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVSSCESDA--FGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNA 705
            GHSS PP  SAIGIL+ A+ +LE NP P L   + P     +++AP ++ FGYK+L SNLW FS  M   +A        VRTTTA+T+  GG K NV+P  A A +NHR+ P   VA V+  D  II+DPRV +R +    E  PVS  + D   F +V  S+KQ F +S+VVP V IANTD+R Y D+  ++YRF PT++  ++++ +HG NERI+ID+Y   I FYYR+I+NA
Sbjct:  281 GHSSFPPAESAIGILAAAVARLEKNPQPALLG-QGPEAATFQYLAPHVS-FGYKILYSNLWLFSGLMAREVALKPIANAIVRTTTAITVFHGGIKENVVPPSATAVINHRVHPAQRVADVISYDREIIDDPRVHIRVKTS-REAHPVSPFDRDCIPFQMVATSIKQVFHDSIVVPGVFIANTDTRWYLDLTSNLYRFLPTIVTPTDITRYHGNNERISIDSYHQAINFYYRIIKNA 513          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: C3XPE1_BRAFL (M20_dimer domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XPE1_BRAFL)

HSP 1 Score: 196 bits (499), Expect = 2.480e-56
Identity = 111/240 (46.25%), Postives = 155/240 (64.58%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKA-VIASDQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVSSCESDA--FGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNAQDP 714
            GGH+SMP   SAIGILS AI+KLE+NPHP LF +  P    LE++A +MT   Y++L +NLW   P+ A V A         RTTTAVT  + G K NV+  +AVA ++HRI P  SV  V+E D  +INDPRV++      LEP+P S    D+  + +++ +++Q + ++LV P  MIANTD+RHYW+++  IYRF P V+  S+L  FHG+NERI++ +Y  ++ FYY LI N   P
Sbjct:  265 GGHASMPRSESAIGILSRAISKLEDNPHPNLFGT-GPEMRTLEYVATEMT-LPYRILTANLWLFSPLVAWVYARKPQTNAFARTTTAVTRFNAGVKDNVISPEAVAVIDHRIHPMSSVEEVMEHDLKVINDPRVKINVINS-LEPAPTSPYGKDSPTYMLLQETIQQIYPDALVTPTFMIANTDTRHYWNLSSAIYRFNPCVMTPSDLPRFHGLNERISVRDYERVMNFYYHLIVNMDKP 501          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: A0A150SAR8_SORCE (M20_dimer domain-containing protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SAR8_SORCE)

HSP 1 Score: 195 bits (495), Expect = 7.860e-56
Identity = 104/240 (43.33%), Postives = 156/240 (65.00%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKAV-IASDQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWL--EPSPVSSCESDAFGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNAQDP 714
            GGHSS+PP+ + +GIL+ AI +LE+  HPI  S + P R++ E +AP+M     ++++SNLW   P+  + +A +   A  +RTTTA T++ GG K NVLP +  A VN RI PGDSV  VL+  A  ++DPRV+++   G    EPSPVSS E   +  +E +++Q F +++V P++++  TDS HY  VA+ +YRFCPT L   + + FHG NERI++ N+  +  FY +LI+NA  P
Sbjct:  266 GGHSSVPPRPTGVGILARAIDRLES--HPIPASLDGPARLLFETLAPEMPLLPNRLILSNLWLLEPIATLSLAGNPATAAMIRTTTAPTMLDGGIKDNVLPKRVRAVVNFRIRPGDSVEAVLDHVARTVDDPRVKVQILGGGKGKEPSPVSSVEGFGYRSIERTIRQVFPDAIVAPSLVLGGTDSAHYQRVADGVYRFCPTRLMDEDRARFHGTNERISVKNFAEVARFYAQLIKNADAP 503          
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Match: C3YEZ1_BRAFL (M20_dimer domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YEZ1_BRAFL)

HSP 1 Score: 195 bits (495), Expect = 9.440e-56
Identity = 111/240 (46.25%), Postives = 154/240 (64.17%), Query Frame = 1
Query:    4 GGHSSMPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYKVLMSNLWFSFPMKA-VIASDQFMAPSVRTTTAVTIVSGGTKANVLPTQAVATVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVS--SCESDAFGIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSELSMFHGINERIAIDNYVSMIEFYYRLIRNAQDP 714
            GGH SMP + SAIGIL+ A+ KLE+NPHP +F +  P   MLE++A +MT   Y++L SNLW   P+ A V A         RTTTA+T  + G K NV+  +A A V+HRI P  +V  VLE D  +I+D RV L  + G L PSPVS    +S  + +++ +++Q F ++LV P  M+ANTD+RHYW+++  IYRF P V+  S+L  FHG+NERI++ NY  ++ FYY LI N   P
Sbjct:  264 GGHGSMPARKSAIGILARAVQKLEDNPHPSMFGT-GPEARMLEYVATEMT-LPYRMLASNLWLFSPLVAWVYAKKPQTNAFARTTTALTSFTAGVKDNVIAPEAEAVVDHRIHPMQTVEEVLEFDRKVIDDARVMLEVK-GSLPPSPVSPHGKDSPTYTVLQETIQQIFPDALVTPTFMVANTDTRHYWNLSSAIYRFNPYVMTPSDLPRFHGLNERISVRNYERVMNFYYHLIVNMDKP 500          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78694.18490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4ML98_9EUKA3.040e-7449.79Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
CBPS2_DICDI4.120e-6044.30Probable carboxypeptidase S-like 2 n=1 Tax=Dictyos... [more]
A0A1S3ICY6_LINUN3.510e-5946.67N-fatty-acyl-amino acid synthase/hydrolase PM20D1 ... [more]
A0A151ZHI6_9MYCE7.120e-5944.30Peptidase M20 family protein n=1 Tax=Tieghemosteli... [more]
UPI000644A84E1.310e-5844.87hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A8J1XGQ3_OWEFU1.750e-5845.19Ofus.G012326 protein n=1 Tax=Owenia fusiformis Tax... [more]
UPI001F4F17656.240e-5847.03N-fatty-acyl-amino acid synthase/hydrolase PM20D1-... [more]
C3XPE1_BRAFL2.480e-5646.25M20_dimer domain-containing protein n=1 Tax=Branch... [more]
A0A150SAR8_SORCE7.860e-5643.33M20_dimer domain-containing protein n=1 Tax=Sorang... [more]
C3YEZ1_BRAFL9.440e-5646.25M20_dimer domain-containing protein n=2 Tax=Branch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78694contigM-pyrifera_M_contig78694:1..773 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.1
Seed ortholog evalue1.9e-47
Seed eggNOG ortholog44689.DDB0233064
Preferred namePM20D1
KEGG koko:K13049
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005615,GO:0006082,GO:0006520,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009987,GO:0010155,GO:0010941,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0022898,GO:0032409,GO:0032501,GO:0032879,GO:0034641,GO:0034762,GO:0034765,GO:0042592,GO:0043269,GO:0043436,GO:0043603,GO:0043604,GO:0043605,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044271,GO:0044281,GO:0044421,GO:0048519,GO:0048523,GO:0048871,GO:0050789,GO:0050794,GO:0051049,GO:0060548,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0097009,GO:1901214,GO:1901215,GO:1901564,GO:1904062,GO:1990845,GO:2000275
EggNOG free text desc.Peptidase dimerisation domain
EggNOG OGs3XEYQ@554915,COG0624@1,KOG2275@2759
Ec32 ortholog descriptionPeptidase M20, dimerisation domain
Ec32 orthologEc-09_000030.1
COG Functional cat.E
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons2
Model size726
Cds size708
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78694.18490.1prot_M-pyrifera_M_contig78694.18490.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78694 19..773 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816689.6266365-UTR-M-pyrifera_M_contig78694:0..181622816689.6266365-UTR-M-pyrifera_M_contig78694:0..18Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig78694 1..18 +
1692278121.3531666-UTR-M-pyrifera_M_contig78694:0..181692278121.3531666-UTR-M-pyrifera_M_contig78694:0..18Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig78694 1..18 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816689.648567-CDS-M-pyrifera_M_contig78694:18..1231622816689.648567-CDS-M-pyrifera_M_contig78694:18..123Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78694 19..123 +
1692278121.3648121-CDS-M-pyrifera_M_contig78694:18..1231692278121.3648121-CDS-M-pyrifera_M_contig78694:18..123Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78694 19..123 +
1622816689.6654863-CDS-M-pyrifera_M_contig78694:170..7731622816689.6654863-CDS-M-pyrifera_M_contig78694:170..773Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78694 171..773 +
1692278121.3739336-CDS-M-pyrifera_M_contig78694:170..7731692278121.3739336-CDS-M-pyrifera_M_contig78694:170..773Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78694 171..773 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78694.18490.1

>prot_M-pyrifera_M_contig78694.18490.1 ID=prot_M-pyrifera_M_contig78694.18490.1|Name=mRNA_M-pyrifera_M_contig78694.18490.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
MPPQHSAIGILSEAITKLENNPHPILFSSESPFRMMLEHMAPDMTNFGYK
VLMSNLWFSFPMKAVIASDQFMAPSVRTTTAVTIVSGGTKANVLPTQAVA
TVNHRIVPGDSVATVLERDAAIINDPRVQLRKREGWLEPSPVSSCESDAF
GIVEVSVKQSFGNSLVVPAVMIANTDSRHYWDVAEDIYRFCPTVLRKSEL
SMFHGINERIAIDNYVSMIEFYYRLIRNAQDPAATV
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mRNA from alignment at M-pyrifera_M_contig78694:1..773+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78694.18490.1 ID=mRNA_M-pyrifera_M_contig78694.18490.1|Name=mRNA_M-pyrifera_M_contig78694.18490.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=773bp|location=Sequence derived from alignment at M-pyrifera_M_contig78694:1..773+ (Macrocystis pyrifera P11B4 male)
CCAGGTGGTCACTCAAGCATGCCTCCTCAACACTCAGCTATTGGCATTCT GTCAGAGGCTATCACCAAGTTGGAGAACAACCCTCACCCTATCCTCTTCT CATCAGAGTCGCCGTTTCGCATGGTAAGCAATCGCGCTACTGGCTGTTTG CACGGTGCTGACAGCAGCAGATGCTGGAGCACATGGCGCCTGACATGACC AACTTTGGTTACAAGGTGCTGATGTCAAACCTTTGGTTCTCCTTTCCGAT GAAGGCAGTCATTGCAAGTGACCAGTTCATGGCTCCATCGGTTCGCACCA CCACTGCTGTCACTATTGTGAGTGGCGGCACCAAAGCCAACGTGCTCCCA ACGCAAGCAGTGGCTACCGTCAACCACCGCATCGTACCCGGCGACTCGGT TGCCACTGTTCTGGAGCGGGATGCTGCCATCATCAACGATCCGAGGGTGC AACTGCGGAAGAGGGAGGGATGGTTGGAGCCTTCTCCAGTGAGCAGCTGT GAGTCAGATGCGTTCGGCATTGTTGAAGTCAGTGTCAAGCAGTCTTTCGG GAACTCCCTGGTGGTCCCTGCAGTCATGATTGCCAACACTGATAGCCGCC ACTACTGGGATGTTGCAGAGGACATCTACCGCTTTTGTCCCACCGTTCTC CGCAAGTCCGAGCTCTCGATGTTTCATGGCATCAACGAGCGAATCGCTAT CGATAACTACGTCTCAATGATTGAGTTCTACTACCGCCTCATCAGAAACG CACAGGACCCTGCTGCTACTGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78694:1..773+

>mRNA_M-pyrifera_M_contig78694.18490.1 ID=mRNA_M-pyrifera_M_contig78694.18490.1|Name=mRNA_M-pyrifera_M_contig78694.18490.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig78694:1..773+ (Macrocystis pyrifera P11B4 male)
ATGCCTCCTCAACACTCAGCTATTGGCATTCTGTCAGAGGCTATCACCAA
GTTGGAGAACAACCCTCACCCTATCCTCTTCTCATCAGAGTCGCCGTTTC
GCATGATGCCTCCTCAACACTCAGCTATTGGCATTCTGTCAGAGGCTATC
ACCAAGTTGGAGAACAACCCTCACCCTATCCTCTTCTCATCAGAGTCGCC
GTTTCGCATGATGCTGGAGCACATGGCGCCTGACATGACCAACTTTGGTT
ACAAGGTGCTGATGTCAAACCTTTGGTTCTCCTTTCCGATGAAGGCAGTC
ATTGCAAGTGACCAGTTCATGGCTCCATCGGTTCGCACCACCACTGCTGT
CACTATTGTGAGTGGCGGCACCAAAGCCAACGTGCTCCCAACGCAAGCAG
TGGCTACCGTCAACCACCGCATCGTACCCGGCGACTCGGTTGCCACTGTT
CTGGAGCGGGATGCTGCCATCATCAACGATCCGAGGGTGCAACTGCGGAA
GAGGGAGGGATGGTTGGAGCCTTCTCCAGTGAGCAGCTGTGAGTCAGATG
CGTTCGGCATTGTTGAAGTCAGTGTCAAGCAGTCTTTCGGGAACTCCCTG
GTGGTCCCTGCAGTCATGATTGCCAACACTGATAGCCGCCACTACTGGGA
TGTTGCAGAGGACATCTACCGCTTTTGTCCCACCGTTCTCCGCAAGTCCG
AGCTCTCGATGTTTCATGGCATCAACGAGCGAATCGCTATCGATAACTAC
GTCTCAATGATTGAGTTCTACTACCGCCTCATCAGAAACGCACAGGACCC
TGCTGCTACTGTGATGCTGGAGCACATGGCGCCTGACATGACCAACTTTG
GTTACAAGGTGCTGATGTCAAACCTTTGGTTCTCCTTTCCGATGAAGGCA
GTCATTGCAAGTGACCAGTTCATGGCTCCATCGGTTCGCACCACCACTGC
TGTCACTATTGTGAGTGGCGGCACCAAAGCCAACGTGCTCCCAACGCAAG
CAGTGGCTACCGTCAACCACCGCATCGTACCCGGCGACTCGGTTGCCACT
GTTCTGGAGCGGGATGCTGCCATCATCAACGATCCGAGGGTGCAACTGCG
GAAGAGGGAGGGATGGTTGGAGCCTTCTCCAGTGAGCAGCTGTGAGTCAG
ATGCGTTCGGCATTGTTGAAGTCAGTGTCAAGCAGTCTTTCGGGAACTCC
CTGGTGGTCCCTGCAGTCATGATTGCCAACACTGATAGCCGCCACTACTG
GGATGTTGCAGAGGACATCTACCGCTTTTGTCCCACCGTTCTCCGCAAGT
CCGAGCTCTCGATGTTTCATGGCATCAACGAGCGAATCGCTATCGATAAC
TACGTCTCAATGATTGAGTTCTACTACCGCCTCATCAGAAACGCACAGGA
CCCTGCTGCTACTGTG
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