mRNA_M-pyrifera_M_contig7864.18479.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7864.18479.1 vs. uniprot
Match: D8LGM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM7_ECTSI) HSP 1 Score: 812 bits (2097), Expect = 7.020e-267 Identity = 545/1207 (45.15%), Postives = 682/1207 (56.50%), Query Frame = 3
Query: 1476 RYLEAWERWHDYDLYCVLAGQFWPLEAQEFRADSRPGKKLFLELDKPARKITKLWRTCWSSRKDRKRRGCLAVQALWRGHRVRRRWRPIVRLRLRHGRRSCLRPCFSSWLKLTRVHKRVRRRFDKLQGRWTRSCFEAWAGWTAHQAAEKLGKLERAGKTLRNIAAYRSXXXXXV-------------------------YTRRARRARTLFARAVGGPTLGAWIRYTAESKKDRQRGDHVVTVQRHTRGYLASFLARRRYRATRTIIRGFDRLVSAKRARQFLRKALAAAHRRAADEHLQTVRDFEVSAGLAKEDKRLARLQKEHRLVNTAVRKVVTKRLKRGWLSTARVVDATRGGGELQREIKAVREEWRALDAERDGPGAMNASG---------RNTWGGGVGXXXFGGVFSSSMSFSGLLNTEKLSGLTWG-KPDAGGSRSERSTR-EDTGTAKKPGALLKIETITPREEAAKLECKTSSPTSVSHGAEAAEREARRRILARDRDLAREIVTHNFDVRNPPPLKCCAPRCGCTFTQDEHYLSHWAAGRHQSSLCASSL----DPEALAGVCGAKDSTGMSTH-----------PITPTSDWASLSTIFDP----------------------------PTAKEDTALAEAGYPTLREGDVASFHLVLSGGAGWK-----------DVQEVGDDGDASTGFSLVSAYIARVWGHGPAHSTLLFWNAVNFWRRHL-TTDPGFIRDAAAMRDLYLDPGALLEARLPESTRKGLLSVMEALPE--LDDATTRERDGP-AVHVKAGGCDTDDGGGDQKEARVPTPSD----HSAILRESAAVDKGSWH--RTTGATIEQSWLELLGNRR-----HGETTFP----VAPSAAAXXXXXXXXVSTPTS-------------------------------LRPTSFDEAQWHALSFLCKTVGPGFWASDLGRRAALLRSKELKREREAAHESVRLERRSRMANEAAEVRKQLVHEREQKEDSLAEPALDAAFDSVIEAVLRSVAAKAELVAMQELEVTREEDMIAEAASVEAVWAVEPTFLDHLIFQEVESYFRERDEREMMSLEDYWTLSGFRTADDDEGNINLNGVVAMSFDLNTIPGGEEGACAASTTIQLAWRQRAARIEARRRLATVYVKRPAPG-GWVYYEHIVTGESQWERPTIAARLFPNSTW 4673
R+LEAWER HDYDLYCVLAGQFWPLEAQ FRA SRPG+KLFLE++ PAR I ++WRT W RKDRKR+GCL Q+LWRG+RVR+RW P++RLR+RHGRRS +RPCFSSW +L RV RRRF++++GRW RSCF AWA WTA+ AAE+ KLERAG+TLRNIAAYRS YTR AR+A L+ARAVGG ++ AW++Y +K+ R++ VT+QRH RGYLA R RYRAT+TIIRGF+RL++A+RARQFLR+ALAAAHR A +E LQ+ D E++ G+A+E+KRLA+LQKE + + AVR+ VTKRL GWL+ + A RGGGEL+RE +AV+EEW+AL+A + A G R++ XXX GG ++ LL K +T +PD G T A+K A R A+ K P S G AEREA RRILAR++ LAREI+ H+FDVRNPPPL CCAP CG TFTQDEHYL+HW AG ++ A L DP+AL + +G P PT D S++ P A+E A AEAG+ +ASFHLV++ A + E+ + +A GF LVSAY+ RVWGHG A++TLLF +AV+ WRR DP F AA +R +L PGA EA LP TR+ L+ ++ LP+ LD DG + AGG + G G +A +P + + + + + D+G RT G + G R +T F PSA VS P LRPTSFDEAQ+ AL+ L + VGPGFWASDLGR AA L +ELKR REAA E VRLERR R+ANEAAE A+LRS A AE++ QELEV REEDM+AEAA+VEAVW VEP L++L+ E+++ E +ERE MS+ED W R AD G L+ +A D N+IPGGEEGA A+TTIQLAWRQR+AR+EARRRLA VYVKR G G V+YE+ VTGESQWERP IA RLFP S W
Sbjct: 135 RFLEAWERRHDYDLYCVLAGQFWPLEAQAFRACSRPGRKLFLEIEAPARVIMRMWRTYWPFRKDRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWKAVRSVGVAVALVRLDFEASFRCTSQSYTRTARQAHRLYARAVGGTSMAAWVQYVGMAKRQRRQKSAAVTIQRHARGYLA----RGRYRATQTIIRGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITVGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWLT---IRPAFRGGGELRREARAVQEEWKALEAAQIAAATTTAPGTTLANASVERDSKDXXXXXXXLGGTLPKTVFPGLLLRKGKPKDITRAARPDGGXXXXXXXXXXRPTTEAEKKAAPASGGVRGGRTGGAQAPAKACVPPSSRGGTAEAEREAWRRILAREKLLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDAGA--AAAAARKLLVRDDPDALLSRPSSPPFSGTPQRQDRGCQKSPLRPTMPTDDQQSVAPSIGSITGSTSTVAWQQQQLRAPAEQQQLRHGFPAAEEAEAEAEAGHSERGGKGIASFHLVVADKADIRRGXXXXXXXXXXXSEIANHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFIDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLPDDVLDGTAGGWDDGDESGDDDAGGGEEVGGDGRAPDAELPFADEKRPRETRVDLDLSDGDEGGRRSIRTAGNAATRDISGGSGGPRAIAKSKAQTKFSRNKIARPSATLQPQQQRRPVSAPGGAXXXXXXXXXXXXXXXXXXXXXXXXARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRLAASLHQQELKRRREAAREIVRLERRGRLANEAAE------------------------------ALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVWVVEPPLLENLLDLEIDALISEGEEREFMSIEDDWVPPEVRLADFRNG---LSTAMACVIDFNSIPGGEEGAHRAATTIQLAWRQRSARVEARRRLAQVYVKRAGAGPGEVFYENTVTGESQWERPLIAYRLFPYSNW 1299
BLAST of mRNA_M-pyrifera_M_contig7864.18479.1 vs. uniprot
Match: A0A6H5L2U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U9_9PHAE) HSP 1 Score: 795 bits (2052), Expect = 1.200e-256 Identity = 546/1224 (44.61%), Postives = 676/1224 (55.23%), Query Frame = 3
Query: 1476 RYLEAWERWHDYDLYCVLAGQFWPLEAQEFRADSRPGKKLFLELDKPARKITKLWRTCWSSRKDRKRRGCLAVQALWRGHRVRRRWRPIVRLRLRHGRRSCLRPCFSSWLKLTRVHKRVRRRFDKLQGRWTRSCFEAWAGWTAHQAAEKLGKLERAGKTLRNIAAYRSXXXXXV----------------------------------------------YTRRARRARTLFARAVGGPTLGAWIRYTAESKKDRQRGDHVVTVQRHTRGYLASFLARRRYRATRTIIRGFDRLVSAKRARQFLRKALAAAHRRAADEHLQTVRDFEVSAGLAKEDKRLARLQKEHRLVNTAVRKVVTKRLKRGWLSTARVVDATRGGGELQREIKAVREEWRALDAERDGPGAMNASGRNTWGGGVGXXXFGGVFSSSMSFSGLLNTEKLSGLTWGKPDAGGSRSERSTREDTGT----------------AKKPGALLKIETITPREEAAKLECKTSSPTSVSHGAEAAEREARRRILARDRDLAREIVTHNFDVRNPPPLKCCAPRCGCTFTQDEHYLSHW-AAG----------RHQSSLCASSLDPEALAGVCGAKDSTGMSTHPITPT--------------SDWASLSTI-----------------FDPPTAKEDTALAEAGYPTLREGDVASFHLVLSGGAGWK-----DVQEVGDDGDASTGFSLVSAYIARVWGHGPAHSTLLFWNAVNFWRRHL-TTDPGFIRDAAAMRDLYLDPGALLEARLPESTRKGLLSVMEALPELDDATTRERDGPAVHVKAGGCDTDDG---GGDQK---------------EARVPTPSDHSAILRESAAVDKGSWHRTTGATIEQSWLELLGNRRHGETTFPVAPSAAAXXXXXXXXVSTP-----------------------------TSLRPTSFDEAQWHALSFLCKTVGPGFWASDLGRRAALLRSKELKREREAAHESVRLERRSRMANEAAEVRKQLVHEREQKEDSLAEPALDAAFDSVIEAVLRSVAAKAELVAMQELEVTREEDMIAEAASVEAVWAVEPTFLDHLIFQEVESYFRERDEREMMSLEDYWTLSGFRTADDDEGNINLNGVVAMSFDLNTIPGGEEGACAASTTIQLAWRQRAARIEARRRLATVYVKRP-APGGWVYYEHIVTGESQWERPTIAARLFPNSTW 4673
R+LEAWER HDYDLYCVLAGQFWPLEA FRA SRPG+KLFL+++ PAR DRKR+GCL Q+LWRG+RVR+RW P++RLR+RHGRRS +RPCFSSW +L RV RRRF++++GRW RSCF AWA WTA+ AAE+ KLERAG TLRNIAAYRS XXXX Y R R+A L+ARAVGG ++ AW++Y +K+ R + VT+QRH RGYLA R RYRAT+TII GF+ L++A+RARQF+R+ALAAAHR+A +E LQ+ D E++AG+A+E+KRLA+LQKE + + AVR+ VTKRL GWL+ + A+RGGGEL+RE +AV+EEW+AL+A + A A+ V S G L G W K G + R+D ++ A E R E A+ K + P S G AEREA RRILAR+R LAREI+ H+FDVRNPPPL CCAP CG TFTQ+EHYLSHW AAG RH S L +D G P PT S S STI P A+E AEAG+P +ASFHLV++ A + EV D +A GF LVSAY+ RVWGHG A++TLLF +AV+ WRR DP F AA +R +L PGA EA LP TR+ L+ ++ LP DD G + G D G GGD + E RV R + + ++G + R PSA VS P LRPTSFDEAQ+ AL+ L + VGPGF+ASDLGRRAA L +ELKR REAAH+ RLERRSR+ANEAAEVR+QL R+ + +S+A+ ALD A SV+EA+LRS A AE++ QELEV REEDM+AEAA+VEAVW VEP L+ L+ E+++ E +ERE MSLED W R A+ G L+ +A D N+IPGGEEGA A+ TIQLAWRQR+AR+EARRRLA VYVKR A G V+YE+ VTGESQWERP IA RLFP S+W
Sbjct: 408 RFLEAWERRHDYDLYCVLAGQFWPLEAHVFRACSRPGRKLFLDIEAPAR--------------DRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGSTLRNIAAYRSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASLFLPFWNTFWQSYIRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLA----RSRYRATQTIIHGFNHLMAARRARQFVRQALAAAHRKATEELLQSGYDAEITAGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWLT---IRPASRGGGELRREARAVQEEWKALEAAQTASAAATAT--------VPGTTPANASVERDSKDGXXXXXXLGGA-WPKTVFPGRLLGKGRRKDXXXXXXXXXXXXXXXXXXXSRPKAAPAGGEVRGGRTEGAQAPAKAAVPPSSRGGTAEAEREAWRRILARERRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQNEHYLSHWDAAGAADAARKLLLRHVPDPLLSRPSSPPLFETPKRQDR-GCQKSPSRPTMPTDDQQSVAPSTVSTTGSTSTIAWRQQQLRAPVEQQQLRHGCPAAEEAKLEAEAGHPERGGKGIASFHLVVADKADVRRGXXXXXSEVTDHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLP--DDVLDGTAGGRGDGDEGGDDDAVGGEEVGGDGRAPDAELPFTDEKRRPETRVDLSDGDEGGRRSISTAGNAATRDSSGGSGGPRATAKSNARTKFSRNKIARPSATRQPQQQRRPVSVPGXXXXXXXXXXXXXXXXXXXXXXXXARDPDGLRPTSFDEAQFQALAHLSRVVGPGFFASDLGRRAAALHQEELKRRREAAHDIARLERRSRLANEAAEVRRQLSRGRDVEIESIAQSALDVASGSVVEALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVWVVEPPLLEDLLDLEIDALISEGEEREHMSLEDDWVPPEVRLANFRNG---LSTAMACVIDFNSIPGGEEGAHRAANTIQLAWRQRSARVEARRRLAQVYVKRAGAAPGEVFYENTVTGESQWERPLIAYRLFPYSSW 1595
BLAST of mRNA_M-pyrifera_M_contig7864.18479.1 vs. uniprot
Match: A0A482S9F4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9F4_9ARCH) HSP 1 Score: 76.3 bits (186), Expect = 3.180e-10 Identity = 55/226 (24.34%), Postives = 97/226 (42.92%), Query Frame = 3
Query: 1479 YLEAWERWHDYDLYCVLAGQFWPLEAQEFRADSRPGKKLFLELDKPARKITKLWRTCWSSRKDRKRRGCLAVQALWRGHRVRRRWRPIVRLRLRHGRRSCLRPCFSSWLKLTRVHKRVRRRFDKLQGRWTRSCFEAWAGWTAHQAAEKLGKLERAGKTLRNIAAYRSXXXXXVYTRRARRARTLFARAVGGPTLGAWIRYTAESKKDRQRGDHVVTVQRHTRGYLA 2156
Y +A R DY+ Y +LA ++ P+ +E+ D+RPGK+ + ++ K A K+ LW ++ K R+ R C VQ WR V R+ PI++LR++ G+R+ CF+ W + + + +R + K+ + +N Y S + + + + R G P W+ + K ++ VQ H R +LA
Sbjct: 170 YHDALLRLKDYERYYILANRYGPMSEEEYFIDARPGKRYYTKVVKGAIKLQLLWDRYYAMAKLRRYRACRMVQKHWRRFIVYRKLHPIIKLRMKFGKRTYFYFCFALWKRYNHLCRTIREAIVYYRSNXXXXXXXXXXXXXXXXXXXXHAKVRKMMIRSQNSGTYNSFHRWVKFLAQNKALKRKLKRYFGFPYFDLWLEHVGWVKHVKRLNIAAKRVQSHIRCFLA 395 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7864.18479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7864.18479.1 >prot_M-pyrifera_M_contig7864.18479.1 ID=prot_M-pyrifera_M_contig7864.18479.1|Name=mRNA_M-pyrifera_M_contig7864.18479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1069bp MIRYLEAWERWHDYDLYCVLAGQFWPLEAQEFRADSRPGKKLFLELDKPAback to top mRNA from alignment at M-pyrifera_M_contig7864:3674..11174- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7864.18479.1 ID=mRNA_M-pyrifera_M_contig7864.18479.1|Name=mRNA_M-pyrifera_M_contig7864.18479.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7501bp|location=Sequence derived from alignment at M-pyrifera_M_contig7864:3674..11174- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7864:3674..11174- >mRNA_M-pyrifera_M_contig7864.18479.1 ID=mRNA_M-pyrifera_M_contig7864.18479.1|Name=mRNA_M-pyrifera_M_contig7864.18479.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=6414bp|location=Sequence derived from alignment at M-pyrifera_M_contig7864:3674..11174- (Macrocystis pyrifera P11B4 male)back to top |