prot_M-pyrifera_M_contig78611.18472.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78611.18472.1
Unique Nameprot_M-pyrifera_M_contig78611.18472.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: UPI001F003361 (phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Desulfoluna sp. ASN36 TaxID=2810562 RepID=UPI001F003361)

HSP 1 Score: 97.8 bits (242), Expect = 4.210e-23
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 0
Query:   29 MRFRPCIDLHDGVVKQIVGGTLRDGEE-PVTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            M+FRPCIDLH GVVKQIVGGTL+DG++ P TNFAAT  A+ FA LYR+DGLTGGH+IQLG
Sbjct:    1 MKFRPCIDLHQGVVKQIVGGTLKDGDDAPTTNFAATHPASWFAELYRKDGLTGGHIIQLG 60          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: A0A067G4P4_CITSI (Uncharacterized protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067G4P4_CITSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.230e-22
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    1 KTPNCSTHTPHSTQFRISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTLRD----GEEPVTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            K  N S + P S+   +S P+ L +R  +RFRPCID+H G VKQIVG TL+D    G + VTNF + KSAAEFA+LY+EDGLTGGH I LG
Sbjct:   29 KNNNSSFYAPSSS---LSRPSRLSVRCAVRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLG 116          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: A0A7J0FI15_9ERIC (Aldolase-type TIM barrel family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0FI15_9ERIC)

HSP 1 Score: 93.2 bits (230), Expect = 1.510e-22
Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   17 ISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTLRD----GEEPVTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            IS P ++ I+   RFRPCID+H G VKQIVG TL+D    G   VTNF + KSAAE+ASLY+EDGLTGGHVI LG
Sbjct:   36 ISRPRAMSIKCGARFRPCIDIHKGKVKQIVGSTLQDLKEGGSSLVTNFESDKSAAEYASLYKEDGLTGGHVIMLG 110          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: UPI00053F4502 (1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI00053F4502)

HSP 1 Score: 96.3 bits (238), Expect = 2.190e-22
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   17 ISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTLRDGEEP----VTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            IS P  L +R  +RFRPCID+H G VKQIVG TLRD +E     VTNF + KSAAEFA LY+EDGLTGGHVI LG
Sbjct:   44 ISKPLRLSVRCAVRFRPCIDIHKGKVKQIVGSTLRDTKEGGSTLVTNFESDKSAAEFAKLYKEDGLTGGHVIMLG 118          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: A0A834W076_9FABA (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W076_9FABA)

HSP 1 Score: 96.3 bits (238), Expect = 4.560e-22
Identity = 53/94 (56.38%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    4 NCSTHTPHSTQFRISSPTSLPIRPK------MRFRPCIDLHDGVVKQIVGGTLRD----GEEPVTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            N  T+  H   F IS P S   +P+      +RFRPCID+H G VKQIVG TL+D    G  PVTNF + KSAAE+A+LY+EDGLTGGHVI LG
Sbjct:   20 NAPTYGLHKRGFVISWPFSASRKPRSSIHCSVRFRPCIDIHKGKVKQIVGSTLQDLEGDGSNPVTNFVSDKSAAEYANLYKEDGLTGGHVIMLG 113          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: D7TJ73_VITVI (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=5 Tax=Vitis TaxID=3603 RepID=D7TJ73_VITVI)

HSP 1 Score: 96.3 bits (238), Expect = 4.900e-22
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   17 ISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTLRDGEEP----VTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            IS P  L +R  +RFRPCID+H G VKQIVG TLRD +E     VTNF + KSAAEFA LY+EDGLTGGHVI LG
Sbjct:   44 ISKPLRLSVRCAVRFRPCIDIHKGKVKQIVGSTLRDTKEGGSTLVTNFESDKSAAEFAKLYKEDGLTGGHVIMLG 118          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: V4S7H3_CITCL (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=5 Tax=Citrus TaxID=2706 RepID=V4S7H3_CITCL)

HSP 1 Score: 94.4 bits (233), Expect = 2.580e-21
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    1 KTPNCSTHTPHSTQFRISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTLRD----GEEPVTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            K  N S + P S+   +S P+ L +R  +RFRPCID+H G VKQIVG TL+D    G + VTNF + KSAAEFA+LY+EDGLTGGH I LG
Sbjct:   29 KNNNSSFYAPSSS---LSRPSRLSVRCAVRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLG 116          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: A0A7S2M401_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2M401_9DINO)

HSP 1 Score: 88.2 bits (217), Expect = 6.080e-21
Identity = 42/60 (70.00%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   29 MRFRPCIDLHDGVVKQIVGGTLRD-GEEPVTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            MRFRPCID+H G VKQIVGGTL+D G  PVTNF A + +  FA  YREDGLTGGHV+ LG
Sbjct:   13 MRFRPCIDIHQGQVKQIVGGTLKDEGAGPVTNFTAAQPSTYFAERYREDGLTGGHVVMLG 72          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: A0A2Z7CI81_9LAMI (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CI81_9LAMI)

HSP 1 Score: 93.2 bits (230), Expect = 6.300e-21
Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 0
Query:   11 HSTQFRISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTLRDGEEP----VTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            H+T   +S P  L ++  +RFRPCID+H G VKQIVG TL+D +E     +TNF + KSA E+A +YR+DGLTGGHVI LG
Sbjct:   29 HATPRLLSRPPKLAVKCGVRFRPCIDIHKGKVKQIVGSTLQDSKEDGPNLITNFVSDKSATEYAKMYRDDGLTGGHVIMLG 109          
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Match: A0A2R6QW08_ACTCC (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QW08_ACTCC)

HSP 1 Score: 93.2 bits (230), Expect = 6.480e-21
Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   17 ISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTLRD----GEEPVTNFAATKSAAEFASLYREDGLTGGHVIQLG 87
            IS P ++ I+   RFRPCID+H G VKQIVG TL+D    G   VTNF + KSAAE+ASLY+EDGLTGGHVI LG
Sbjct:   37 ISRPRAMSIKCGARFRPCIDIHKGKVKQIVGSTLQDLKEGGSSLVTNFESDKSAAEYASLYKEDGLTGGHVIMLG 111          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78611.18472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F0033614.210e-2376.67phosphoribosylformimino-5-aminoimidazole carboxami... [more]
A0A067G4P4_CITSI1.230e-2257.14Uncharacterized protein (Fragment) n=1 Tax=Citrus ... [more]
A0A7J0FI15_9ERIC1.510e-2264.00Aldolase-type TIM barrel family protein n=1 Tax=Ac... [more]
UPI00053F45022.190e-2266.671-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)me... [more]
A0A834W076_9FABA4.560e-2256.381-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met... [more]
D7TJ73_VITVI4.900e-2266.671-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met... [more]
V4S7H3_CITCL2.580e-2157.141-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met... [more]
A0A7S2M401_9DINO6.080e-2170.00Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A2Z7CI81_9LAMI6.300e-2155.561-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met... [more]
A0A2R6QW08_ACTCC6.480e-2164.001-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 29..87
e-value: 1.8E-16
score: 62.2
NoneNo IPR availablePANTHERPTHR43090FAMILY NOT NAMEDcoord: 28..87
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 29..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78611contigM-pyrifera_M_contig78611:1..342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78611.18472.1mRNA_M-pyrifera_M_contig78611.18472.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78611 1..342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78611.18472.1 ID=prot_M-pyrifera_M_contig78611.18472.1|Name=mRNA_M-pyrifera_M_contig78611.18472.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
KTPNCSTHTPHSTQFRISSPTSLPIRPKMRFRPCIDLHDGVVKQIVGGTL
RDGEEPVTNFAATKSAAEFASLYREDGLTGGHVIQLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR011060RibuloseP-bd_barrel