prot_M-pyrifera_M_contig78300.18409.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78300.18409.1
Unique Nameprot_M-pyrifera_M_contig78300.18409.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A8J4S4B3_9STRA (Homeobox domain-containing protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4S4B3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.350e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:    1 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 45          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A2P4YHL4_9STRA (Homeobox domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHL4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 3.890e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:   50 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 94          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A8J5MG20_9STRA (Homeobox_KN domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MG20_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.410e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  148 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 192          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: D0P1Y7_PHYIT (Homeobox domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0P1Y7_PHYIT)

HSP 1 Score: 56.2 bits (134), Expect = 6.140e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  148 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 192          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A421FJD3_9STRA (Homeobox domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FJD3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.380e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  116 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 160          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A2P4XQT1_9STRA (Homeobox domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQT1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.470e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  129 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 173          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A225VPZ8_9STRA (Homebox and aldo/keto reductase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VPZ8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.490e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  135 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 179          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A6A3QGY5_9STRA (Homeobox domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3QGY5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.590e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  140 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 184          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: H3GDP4_PHYRM (Homeobox domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDP4_PHYRM)

HSP 1 Score: 56.2 bits (134), Expect = 6.710e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  142 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 186          
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Match: A0A0P1B4M7_PLAHL (Homebox domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4M7_PLAHL)

HSP 1 Score: 56.2 bits (134), Expect = 6.810e-8
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGP 45
            MFS +H+ HPYP   E+ +LA+ A + V+Q++ WFTNARKR+W P
Sbjct:  147 MFSPEHFAHPYPSEEEKEELANEAGIEVKQLSNWFTNARKRLWQP 191          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78300.18409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4S4B3_9STRA2.350e-853.33Homeobox domain-containing protein n=1 Tax=Phytoph... [more]
A0A2P4YHL4_9STRA3.890e-853.33Homeobox domain-containing protein n=1 Tax=Phytoph... [more]
A0A8J5MG20_9STRA4.410e-853.33Homeobox_KN domain-containing protein n=1 Tax=Phyt... [more]
D0P1Y7_PHYIT6.140e-853.33Homeobox domain-containing protein n=13 Tax=Phytop... [more]
A0A421FJD3_9STRA6.380e-853.33Homeobox domain-containing protein n=2 Tax=Phytoph... [more]
A0A2P4XQT1_9STRA6.470e-853.33Homeobox domain-containing protein n=1 Tax=Phytoph... [more]
A0A225VPZ8_9STRA6.490e-853.33Homebox and aldo/keto reductase n=1 Tax=Phytophtho... [more]
A0A6A3QGY5_9STRA6.590e-853.33Homeobox domain-containing protein n=3 Tax=Phytoph... [more]
H3GDP4_PHYRM6.710e-853.33Homeobox domain-containing protein n=1 Tax=Phytoph... [more]
A0A0P1B4M7_PLAHL6.810e-853.33Homebox domain-containing protein n=1 Tax=Plasmopa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 1..50
e-value: 1.3E-11
score: 45.7
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 5..41
e-value: 7.1E-12
score: 45.0
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 1..45
score: 9.815
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 5..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78300contigM-pyrifera_M_contig78300:737..892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78300.18409.1mRNA_M-pyrifera_M_contig78300.18409.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78300 716..892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78300.18409.1 ID=prot_M-pyrifera_M_contig78300.18409.1|Name=mRNA_M-pyrifera_M_contig78300.18409.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
MFSDDHYHHPYPIPWEQLDLAHTAQMSVRQVTFWFTNARKRMWGPSRHSR
KL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008422Homeobox_KN_domain
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf