prot_M-pyrifera_M_contig78294.18405.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78294.18405.1
Unique Nameprot_M-pyrifera_M_contig78294.18405.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length200
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78294.18405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR39299FAMILY NOT NAMEDcoord: 2..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..200
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..19
score: 0.624
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 150..167
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78294contigM-pyrifera_M_contig78294:5..604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78294.18405.1mRNA_M-pyrifera_M_contig78294.18405.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78294 5..604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78294.18405.1 ID=prot_M-pyrifera_M_contig78294.18405.1|Name=mRNA_M-pyrifera_M_contig78294.18405.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
SKWFLLAVWVESVLLGSLAIAILADPSNRDESVVYGALSLLSVVFWVYLA
THAVTTESRTEFWAASLLSVLFSIFIFWEYFLNPTGLGEVWFRLRLVVVI
VRGLFQLGHLVGFVFVDREFGWISYKVVGTDVGIQSLFSFLRATHSLLKI
DIFSFALLLILARYFLLDAASVEFISGLVATVFAVIFAVVGYYSLTYEHR
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