prot_M-pyrifera_M_contig7828.18399.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig7828.18399.1
Unique Name	prot_M-pyrifera_M_contig7828.18399.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	326

Homology

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: D7FRI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI3_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 2.560e-100
Identity = 190/296 (64.19%), Postives = 207/296 (69.93%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPP--------------------------------TDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPGSDTAAAXXXXXXXXXXGMGQA-LPGMSAXXXXXXXXXXXXXXXXXXXXGTGLVAQSPSAAANAALEAALSGTAYGAGA 263
            MKSLESVP+VLQLN+RVPDFQKFPVMVKASEAEKNYLAKQEEKAKNP G  +VILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTY+D EST ACLEKLDGLEVAGKAL+VS+CKADPK++P                                 + +AS+NW LDDDEG G +KMDS NRA +M+R GGA       A           M  A LPGMS                      TG+ +QSPSAAANAALEAALSGTA+GAGA
Sbjct:  143 MKSLESVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPTG--HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADTESTNACLEKLDGLEVAGKALSVSYCKADPKSIPKNLDANVTAXXXXXXXXXXXXXXXXXXTTAGQQSTAASSNWKLDDDEGAGGVKMDSTNRANIMSRFGGA-------AMNMGLAGIPGMMNHATLPGMSGTGMGGAMSTGM----------TGVASQSPSAAANAALEAALSGTAFGAGA 419

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A6H5L1B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1B8_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 2.140e-94
Identity = 197/308 (63.96%), Postives = 214/308 (69.48%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPP---------------------------------TDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG-----------SDTAAAXXXXXXXXXXGMGQA-LPGMSAXXXXXXXXXXXXXXXXXXXXGTGLVAQSPSAAANAALEAALSGTAYGAGA 263
            MK L+SVP+VLQLN+RVPDFQKFPVMVKASEAEKNYLAKQ +KAKNP G  +VILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTY+D EST ACLEKLDGLEVAGKALAVS+CKADPKT+P                                  + +AS+NW LDDDEG G +KMDS NRA +M+R GG  G           S T   XXXXXXXX   MG A +PGM                       TG+ AQSPSAAANAALEAALSGTA+GAGA
Sbjct:  485 MKDLDSVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPTG--HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADTESTNACLEKLDGLEVAGKALAVSYCKADPKTIPKNLDANANATXXXXXXXXXHAASLAXXXXAGQQSSTAASSNWKLDDDEGAGGVKMDSTNRANIMSRFGGGTGAGLPPASLGAASATXXXXXXXXXXXAMNMGFAGIPGMMNHVTLPGMSGTGMGGAMSTGM-TGVAAQSPSAAANAALEAALSGTAFGAGA 789

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A7S2MMP2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMP2_9STRA)

HSP 1 Score: 152 bits (383), Expect = 3.730e-38
Identity = 87/185 (47.03%), Postives = 122/185 (65.95%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEK-AKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGL--EVAGKALAVSFCKADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLG 182
            MK LES+P+VL LN  VPDFQKFP+++KASEAEKN+LAKQE    ++  G   V++ +       +L++GNLH +ITEDDL  + + FGE+  + LHRDE G SK +AFV +   +     ++K+ GL  E+ GKA+ V F   + ++      ASANW LDDDEG G ++M++ +R  LMARLG
Sbjct:  205 MKDLESIPLVLMLNGTVPDFQKFPILIKASEAEKNFLAKQEATPVQDQMGGTGVVVPSVQN----RLYVGNLHVHITEDDLRSVLQPFGEIESVHLHRDEVGTSKGYAFVKFLKADDANLAMQKIGGLGLELMGKAIKVGF--VNEQSGSGVTGASANWKLDDDEGSG-LQMNAQSRVALMARLG 382

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A7S2SFS3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFS3_9STRA)

HSP 1 Score: 143 bits (360), Expect = 8.580e-35
Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKL--DGLEVAGKALAVSFCK---------ADPKTVPPT-------DSASANWMLDDDEGEGSMKMDSANRATLMARLG 182
            MK L+S+P+VL LN  VPDFQ+FP++VKASEAEKN+LAKQE  A   A             A  +L++GNLH++I ED+L  + + FG++  + L RDEAG SK FA VT+   +  T  L K+  +GLE+ GKA+ V+F           A    VP +        +AS NW LDDDEG G ++M++ +RA LMARLG
Sbjct:  211 MKDLDSIPLVLMLNGTVPDFQRFPILVKASEAEKNFLAKQEAAAAEGAN------------AQTQLYVGNLHEHIGEDELRTVLQPFGQIEAVQLQRDEAGASKGFALVTFVRADDATTALNKISSEGLELMGKAIKVAFLSNNGNGQGAAAPGGNVPGSMGSGLGGANASGNWKLDDDEGTG-LQMNAQSRAALMARLG 397

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: I2CP96_NANGC (Rna binding motif protein 39b (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP96_NANGC)

HSP 1 Score: 136 bits (343), Expect = 4.920e-33
Identity = 88/196 (44.90%), Postives = 116/196 (59.18%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKN---PAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCK-------ADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG 186
            M  LE++P VL +ND+VPDFQKFP+ VKASEAEKNYLAKQE  AK    P G     +G        K+ +GNLH NITE+DL ++ + FGEV  L L ++E G SK FAF T+S  E     + +L G+ +A + + V           A   +VP +  A+ NW LDD    G + MD+A RA LM++LG A G
Sbjct:  131 MADLETIPNVLLMNDQVPDFQKFPIAVKASEAEKNYLAKQEAIAKGTVRPDGGRKRNVGQPN-----KVFLGNLHPNITEEDLMDLLKPFGEVQGLALAKNEEGVSKGFAFATFSKVEEAQTVMTQLGGVPLADRPIKVGPVNDRGVEAVAMASSVPASGPATGNWRLDD---AGVLPMDAAARAELMSKLGAAAG 318

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A7S2US71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US71_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.400e-32
Identity = 81/189 (42.86%), Postives = 111/189 (58.73%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAA---ALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG 186
            M  LES+P  L +N +VPDFQ+FP++VKASEAEKN+LAK+E        +A  +    A   A  G ++++GNLH NI EDDL  +    G+V  + L RDE G+SK FAF  +         +++L GLE+ G+ L V F        P   +A+ NW LDDD G+G + M   +RA LMA+LG A G
Sbjct:   80 MTELESIPACLLMNGQVPDFQRFPILVKASEAEKNFLAKKEATMAAAQAEAAKVAEEEAKGPATDG-RVYVGNLHLNIGEDDLKSVLEQVGDVEYVKLQRDEMGQSKGFAFAKFRRASHAQDAIDRLAGLELVGQNLKVGFVND-----PGMGAATGNWRLDDDSGQG-LAMSGQSRAALMAKLGQAAG 261

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A8K1FSA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FSA1_PYTOL)

HSP 1 Score: 132 bits (332), Expect = 4.710e-31
Identity = 74/183 (40.44%), Postives = 113/183 (61.75%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGG 183
            M +LE +P VL LN +VPDFQ FP+M+KASEAEKN+ A++ +   N A +  +  G  +  A  +++ GNLH NITEDDL  + ++FGEV  + ++RDE G S+ F F+ ++  +     L K +G+E+AG  L +     +        ++S  W LDDDEG  ++ M+S +R+ LMA+L G
Sbjct:  214 MSNLEDIPKVLMLNGQVPDFQSFPIMIKASEAEKNFAARK-DSVMNSAAKGGI--GGGSLSAASRIYCGNLHTNITEDDLRAVFQAFGEVLSVNINRDEMGRSRGFGFIQFNTPQEANFALSKGNGIELAGNYLKLGCVNENAGE----STSSGGWRLDDDEG--NLSMNSQSRSALMAKLAG 387

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A2D4CE82_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE82_PYTIN)

HSP 1 Score: 128 bits (321), Expect = 2.770e-30
Identity = 78/193 (40.41%), Postives = 112/193 (58.03%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKAL---AVSFCKADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPGSDTA 190
            M +LE VP VL L+  VP FQ+FP++VKASEAEKN+ A+++    N A          ++ A  +++ GNLH N+TEDDL  + ++FGEV  + ++RDE G S+ F F+ +   +     L K +GLE+AG  L    VS   AD        S + +W L+D+EG G + M+S NR  LMA+L G     TA
Sbjct:   56 MSNLEDVPKVLMLSGHVPPFQRFPILVKASEAEKNFAARKDSVMNNAAKAQGGGDAGLSSSAASRIYCGNLHTNLTEDDLRAVFQAFGEVVSVNINRDEMGRSRGFGFIQFRSPQEANFALSKGNGLELAGNYLKLGGVSETGADQ-------SGNGSWKLEDEEGYG-LSMNSHNRTALMAKLAGTKNIPTA 240

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A067BR78_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BR78_SAPPC)

HSP 1 Score: 130 bits (326), Expect = 3.310e-30
Identity = 79/219 (36.07%), Postives = 115/219 (52.51%), Query Frame = 0

Query:    3 SLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEE----------KAKNPAGQANVILGNAAAL---AGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCK----------------------ADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG 186
            +LE +P VL +N +VP FQ FP+M+KASEAEKN+ AK++            A   +G A+   G    L   A  +++ GNLH NITE+DL  +  +FG+V  +I++RD+ G SK F+F+ +S  E     L K +GLE+AG  + V   K                      A P      +    NW L+D+EG G M ++S +R+ LMA+L G  G
Sbjct:  181 NLEDIPKVLTMNGQVPSFQSFPIMIKASEAEKNFAAKKDAVFSSGPTTKASASGYSGGASAYTGGGTGLSLAAASRVYCGNLHNNITEEDLKAVFSAFGDVVNVIINRDDMGRSKGFSFIQFSSPEEANLALTKANGLELAGNFIKVGPVKEGEGVGGXXXXXXXXSYQSHRDAPPSAFNNKNYGGNNWKLEDEEGTGGMALNSVSRSQLMAKLAGGAG 399

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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: K3X3I5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3I5_GLOUD)

HSP 1 Score: 130 bits (326), Expect = 4.160e-30
Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 0

Query:    1 MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPA--------GQANVILGNAAALAGLKL------HIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCK-----ADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGG 183
            M +LE VP VL LN ++PDFQ FP+M+KASEAEKN+ AK++    N A        G     LG A  L+G  L      + GNLH NITEDDL  + +SFGEV  + ++RDE G SK F F+ +S  E     L K +GLE+AG  L +                   S + +W L+DDEG G + M+S +R  LMA+L G
Sbjct:  217 MSNLEDVPKVLILNGQIPDFQVFPIMIKASEAEKNFAAKKDSVMNNVAAATTGPLSGAFGGGLGFAGGLSGASLSAAARIYCGNLHTNITEDDLRCVFQSFGEVVSVNINRDEMGRSKGFGFIQFSAPEEANFALSKGNGLELAGNYLKLGTVNDHSGXXXXXXXXXXXSGAGSWKLEDDEGTG-LSMNSQSRTALMAKLAG 417

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRI3_ECTSI	2.560e-100	64.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L1B8_9PHAE	2.140e-94	63.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2MMP2_9STRA	3.730e-38	47.03	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2SFS3_9STRA	8.580e-35	45.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
I2CP96_NANGC	4.920e-33	44.90	Rna binding motif protein 39b (Fragment) n=1 Tax=N...	[more]
A0A7S2US71_9STRA	4.400e-32	42.86	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A8K1FSA1_PYTOL	4.710e-31	40.44	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A2D4CE82_PYTIN	2.770e-30	40.41	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
A0A067BR78_SAPPC	3.310e-30	36.07	Uncharacterized protein n=3 Tax=Saprolegniaceae Ta...	[more]
K3X3I5_GLOUD	4.160e-30	42.08	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 65..137 e-value: 2.5E-20 score: 83.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 67..134 e-value: 6.5E-17 score: 61.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 64..141 score: 16.176
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 25..146 e-value: 1.1E-22 score: 82.6
None	No IPR available	PANTHER	PTHR23139:SF101	RNA-BINDING PROTEIN 39	coord: 4..189
None	No IPR available	PANTHER	PTHR23139	RNA-BINDING PROTEIN	coord: 4..189
None	No IPR available	TMHMM	TMhelix		coord: 295..317
None	No IPR available	TMHMM	TMhelix		coord: 266..288
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 63..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig7828	contig	M-pyrifera_M_contig7828:6839..11944 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig7828.18399.1	mRNA_M-pyrifera_M_contig7828.18399.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig7828 6818..11944 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig7828.18399.1 ID=prot_M-pyrifera_M_contig7828.18399.1|Name=mRNA_M-pyrifera_M_contig7828.18399.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=326bp
MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQ
ANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEA
GESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPPTD
SASANWMLDDDEGEGSMKMDSANRATLMARLGGAPGSDTAAAAAAAAAAA
AAGMGQALPGMSALPGMPTLPGMSGMGMMGSMGGTGLVAQSPSAAANAAL
EAALSGTAYGAGAGTLGGGGAGVGAMGGAGMGIGGVSGGGAMAGGGVSGA
ALGAGGVGMGAMGIGAIGTGVSMGLP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf