mRNA_M-pyrifera_M_contig7828.18399.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7828.18399.1
Unique NamemRNA_M-pyrifera_M_contig7828.18399.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: D7FRI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI3_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.900e-105
Identity = 196/303 (64.69%), Postives = 214/303 (70.63%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPP--------------------------------TDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPGSDTAAAXXXXXXXXXXGMGQA-LPGMSAXXXXXXXXXXXXXXXXXXXXGTGLVAQSPSAAANAALEAALSGTAYGAGA 810
            +GFAYVEMKSLESVP+VLQLN+RVPDFQKFPVMVKASEAEKNYLAKQEEKAKNP G  +VILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTY+D EST ACLEKLDGLEVAGKAL+VS+CKADPK++P                                 + +AS+NW LDDDEG G +KMDS NRA +M+R GGA       A           M  A LPGMS                      TG+ +QSPSAAANAALEAALSGTA+GAGA
Sbjct:  136 KGFAYVEMKSLESVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPTG--HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADTESTNACLEKLDGLEVAGKALSVSYCKADPKSIPKNLDANVTAXXXXXXXXXXXXXXXXXXTTAGQQSTAASSNWKLDDDEGAGGVKMDSTNRANIMSRFGGA-------AMNMGLAGIPGMMNHATLPGMSGTGMGGAMSTGM----------TGVASQSPSAAANAALEAALSGTAFGAGA 419
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A6H5L1B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1B8_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 2.250e-99
Identity = 203/315 (64.44%), Postives = 221/315 (70.16%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPP---------------------------------TDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG-----------SDTAAAXXXXXXXXXXGMGQA-LPGMSAXXXXXXXXXXXXXXXXXXXXGTGLVAQSPSAAANAALEAALSGTAYGAGA 810
            +GFAYVEMK L+SVP+VLQLN+RVPDFQKFPVMVKASEAEKNYLAKQ +KAKNP G  +VILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTY+D EST ACLEKLDGLEVAGKALAVS+CKADPKT+P                                  + +AS+NW LDDDEG G +KMDS NRA +M+R GG  G           S T   XXXXXXXX   MG A +PGM                       TG+ AQSPSAAANAALEAALSGTA+GAGA
Sbjct:  478 KGFAYVEMKDLDSVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPTG--HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADTESTNACLEKLDGLEVAGKALAVSYCKADPKTIPKNLDANANATXXXXXXXXXHAASLAXXXXAGQQSSTAASSNWKLDDDEGAGGVKMDSTNRANIMSRFGGGTGAGLPPASLGAASATXXXXXXXXXXXAMNMGFAGIPGMMNHVTLPGMSGTGMGGAMSTGM-TGVAAQSPSAAANAALEAALSGTAFGAGA 789
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A7S2MMP2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMP2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 4.850e-43
Identity = 93/192 (48.44%), Postives = 129/192 (67.19%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEK-AKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGL--EVAGKALAVSFCKADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLG 567
            +GFAYVEMK LES+P+VL LN  VPDFQKFP+++KASEAEKN+LAKQE    ++  G   V++ +       +L++GNLH +ITEDDL  + + FGE+  + LHRDE G SK +AFV +   +     ++K+ GL  E+ GKA+ V F   + ++      ASANW LDDDEG G ++M++ +R  LMARLG
Sbjct:  198 KGFAYVEMKDLESIPLVLMLNGTVPDFQKFPILIKASEAEKNFLAKQEATPVQDQMGGTGVVVPSVQN----RLYVGNLHVHITEDDLRSVLQPFGEIESVHLHRDEVGTSKGYAFVKFLKADDANLAMQKIGGLGLELMGKAIKVGF--VNEQSGSGVTGASANWKLDDDEGSG-LQMNAQSRVALMARLG 382
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A7S2SFS3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFS3_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.310e-39
Identity = 96/207 (46.38%), Postives = 129/207 (62.32%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKL--DGLEVAGKALAVSFCK---------ADPKTVPPT-------DSASANWMLDDDEGEGSMKMDSANRATLMARLG 567
            +GFAYVEMK L+S+P+VL LN  VPDFQ+FP++VKASEAEKN+LAKQE  A   A             A  +L++GNLH++I ED+L  + + FG++  + L RDEAG SK FA VT+   +  T  L K+  +GLE+ GKA+ V+F           A    VP +        +AS NW LDDDEG G ++M++ +RA LMARLG
Sbjct:  204 KGFAYVEMKDLDSIPLVLMLNGTVPDFQRFPILVKASEAEKNFLAKQEAAAAEGAN------------AQTQLYVGNLHEHIGEDELRTVLQPFGQIEAVQLQRDEAGASKGFALVTFVRADDATTALNKISSEGLELMGKAIKVAFLSNNGNGQGAAAPGGNVPGSMGSGLGGANASGNWKLDDDEGTG-LQMNAQSRAALMARLG 397
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: I2CP96_NANGC (Rna binding motif protein 39b (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP96_NANGC)

HSP 1 Score: 150 bits (378), Expect = 5.970e-38
Identity = 94/203 (46.31%), Postives = 123/203 (60.59%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKN---PAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCK-------ADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG 579
            +GFAYVEM  LE++P VL +ND+VPDFQKFP+ VKASEAEKNYLAKQE  AK    P G     +G        K+ +GNLH NITE+DL ++ + FGEV  L L ++E G SK FAF T+S  E     + +L G+ +A + + V           A   +VP +  A+ NW LDD    G + MD+A RA LM++LG A G
Sbjct:  124 KGFAYVEMADLETIPNVLLMNDQVPDFQKFPIAVKASEAEKNYLAKQEAIAKGTVRPDGGRKRNVGQPN-----KVFLGNLHPNITEEDLMDLLKPFGEVQGLALAKNEEGVSKGFAFATFSKVEEAQTVMTQLGGVPLADRPIKVGPVNDRGVEAVAMASSVPASGPATGNWRLDD---AGVLPMDAAARAELMSKLGAAAG 318
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A7S2US71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US71_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.570e-37
Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAA---ALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG 579
            +GFAYVEM  LES+P  L +N +VPDFQ+FP++VKASEAEKN+LAK+E        +A  +    A   A  G ++++GNLH NI EDDL  +    G+V  + L RDE G+SK FAF  +         +++L GLE+ G+ L V F        P   +A+ NW LDDD G+G + M   +RA LMA+LG A G
Sbjct:   73 KGFAYVEMTELESIPACLLMNGQVPDFQRFPILVKASEAEKNFLAKKEATMAAAQAEAAKVAEEEAKGPATDG-RVYVGNLHLNIGEDDLKSVLEQVGDVEYVKLQRDEMGQSKGFAFAKFRRASHAQDAIDRLAGLELVGQNLKVGFVND-----PGMGAATGNWRLDDDSGQG-LAMSGQSRAALMAKLGQAAG 261
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A8K1FSA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FSA1_PYTOL)

HSP 1 Score: 145 bits (367), Expect = 7.470e-36
Identity = 80/190 (42.11%), Postives = 120/190 (63.16%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGG 570
            +GFAYVEM +LE +P VL LN +VPDFQ FP+M+KASEAEKN+ A++ +   N A +  +  G  +  A  +++ GNLH NITEDDL  + ++FGEV  + ++RDE G S+ F F+ ++  +     L K +G+E+AG  L +     +        ++S  W LDDDEG  ++ M+S +R+ LMA+L G
Sbjct:  207 KGFAYVEMSNLEDIPKVLMLNGQVPDFQSFPIMIKASEAEKNFAARK-DSVMNSAAKGGI--GGGSLSAASRIYCGNLHTNITEDDLRAVFQAFGEVLSVNINRDEMGRSRGFGFIQFNTPQEANFALSKGNGIELAGNYLKLGCVNENAGE----STSSGGWRLDDDEG--NLSMNSQSRSALMAKLAG 387
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A067BR78_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BR78_SAPPC)

HSP 1 Score: 143 bits (361), Expect = 5.470e-35
Identity = 85/228 (37.28%), Postives = 122/228 (53.51%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEE----------KAKNPAGQANVILGNAAAL---AGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCK----------------------ADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGGAPG 579
            +GFAYVE  +LE +P VL +N +VP FQ FP+M+KASEAEKN+ AK++            A   +G A+   G    L   A  +++ GNLH NITE+DL  +  +FG+V  +I++RD+ G SK F+F+ +S  E     L K +GLE+AG  + V   K                      A P      +    NW L+D+EG G M ++S +R+ LMA+L G  G
Sbjct:  172 KGFAYVEFSNLEDIPKVLTMNGQVPSFQSFPIMIKASEAEKNFAAKKDAVFSSGPTTKASASGYSGGASAYTGGGTGLSLAAASRVYCGNLHNNITEEDLKAVFSAFGDVVNVIINRDDMGRSKGFSFIQFSSPEEANLALTKANGLELAGNFIKVGPVKEGEGVGGXXXXXXXXSYQSHRDAPPSAFNNKNYGGNNWKLEDEEGTGGMALNSVSRSQLMAKLAGGAG 399
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: K3X3I5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3I5_GLOUD)

HSP 1 Score: 143 bits (361), Expect = 7.450e-35
Identity = 91/209 (43.54%), Postives = 119/209 (56.94%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPA--------GQANVILGNAAALAGLKL------HIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCK-----ADPKTVPPTDSASANWMLDDDEGEGSMKMDSANRATLMARLGG 570
            +GFAYVEM +LE VP VL LN ++PDFQ FP+M+KASEAEKN+ AK++    N A        G     LG A  L+G  L      + GNLH NITEDDL  + +SFGEV  + ++RDE G SK F F+ +S  E     L K +GLE+AG  L +                   S + +W L+DDEG G + M+S +R  LMA+L G
Sbjct:  210 KGFAYVEMSNLEDVPKVLILNGQIPDFQVFPIMIKASEAEKNFAAKKDSVMNNVAAATTGPLSGAFGGGLGFAGGLSGASLSAAARIYCGNLHTNITEDDLRCVFQSFGEVVSVNINRDEMGRSKGFGFIQFSAPEEANFALSKGNGLELAGNYLKLGTVNDHSGXXXXXXXXXXXSGAGSWKLEDDEGTG-LSMNSQSRTALMAKLAG 417
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BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Match: A0A0W8DEW4_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DEW4_PHYNI)

HSP 1 Score: 140 bits (352), Expect = 1.120e-34
Identity = 90/212 (42.45%), Postives = 128/212 (60.38%), Query Frame = 1 
Query:    1 QGFAYVEMKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAK------------NPAGQANVILG---NAAAL-AGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPK-----TVPPTDSASAN-WMLDDDEGEGSMKMDSANRATLMARLGG 570
            +GFAYVE+ +LE VP VL LN +VPDFQ FP+M+KASEAEKN+ AK++                + AG A  I G   +A+AL A  +++ GNLH NITEDDL  + +SFGEV  + ++RDE G SK F+F+ +S  +     L K +GLE+AG  L +     +       T    +SA+   W L+D+EG G + M++ +R+ LMA+L G
Sbjct:   25 KGFAYVELSNLEDVPKVLLLNGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNATVASSGSLTDASGAGLAGAIAGGGMSASALSAASRIYCGNLHTNITEDDLRIVFQSFGEVLSVTINRDEMGRSKGFSFIQFSSPQEANFALSKGNGLELAGNYLRLGPVNENAVSNRAGTASMDNSATGGRWKLEDEEGAG-LSMNAQSRSALMAKLAG 235
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7828.18399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRI3_ECTSI1.900e-10564.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1B8_9PHAE2.250e-9964.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2MMP2_9STRA4.850e-4348.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SFS3_9STRA1.310e-3946.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I2CP96_NANGC5.970e-3846.31Rna binding motif protein 39b (Fragment) n=1 Tax=N... [more]
A0A7S2US71_9STRA4.570e-3744.39Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8K1FSA1_PYTOL7.470e-3642.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067BR78_SAPPC5.470e-3537.28Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
K3X3I5_GLOUD7.450e-3543.54Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0W8DEW4_PHYNI1.120e-3442.45Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7828contigM-pyrifera_M_contig7828:6818..11944 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.2
Seed ortholog evalue4.6e-84
Seed eggNOG ortholog2880.D7FRI3
KEGG koko:K13091
Hectar predicted targeting categoryother localisation
EggNOG free text desc.mRNA processing
EggNOG OGsKOG0147@1,KOG0147@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons5
Model size999
Cds size978
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7828.18399.1prot_M-pyrifera_M_contig7828.18399.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7828 6839..11944 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816684.265888-UTR-M-pyrifera_M_contig7828:6817..68381622816684.265888-UTR-M-pyrifera_M_contig7828:6817..6838Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7828 6818..6838 +
1692278118.0553546-UTR-M-pyrifera_M_contig7828:6817..68381692278118.0553546-UTR-M-pyrifera_M_contig7828:6817..6838Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7828 6818..6838 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816684.276625-CDS-M-pyrifera_M_contig7828:6838..69581622816684.276625-CDS-M-pyrifera_M_contig7828:6838..6958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 6839..6958 +
1692278118.0653896-CDS-M-pyrifera_M_contig7828:6838..69581692278118.0653896-CDS-M-pyrifera_M_contig7828:6838..6958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 6839..6958 +
1622816684.2868927-CDS-M-pyrifera_M_contig7828:8162..83091622816684.2868927-CDS-M-pyrifera_M_contig7828:8162..8309Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 8163..8309 +
1692278118.0734165-CDS-M-pyrifera_M_contig7828:8162..83091692278118.0734165-CDS-M-pyrifera_M_contig7828:8162..8309Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 8163..8309 +
1622816684.2991729-CDS-M-pyrifera_M_contig7828:8953..90911622816684.2991729-CDS-M-pyrifera_M_contig7828:8953..9091Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 8954..9091 +
1692278118.0820572-CDS-M-pyrifera_M_contig7828:8953..90911692278118.0820572-CDS-M-pyrifera_M_contig7828:8953..9091Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 8954..9091 +
1622816684.3148043-CDS-M-pyrifera_M_contig7828:10292..104941622816684.3148043-CDS-M-pyrifera_M_contig7828:10292..10494Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 10293..10494 +
1692278118.092411-CDS-M-pyrifera_M_contig7828:10292..104941692278118.092411-CDS-M-pyrifera_M_contig7828:10292..10494Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 10293..10494 +
1622816684.3258703-CDS-M-pyrifera_M_contig7828:11573..119441622816684.3258703-CDS-M-pyrifera_M_contig7828:11573..11944Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 11574..11944 +
1692278118.109864-CDS-M-pyrifera_M_contig7828:11573..119441692278118.109864-CDS-M-pyrifera_M_contig7828:11573..11944Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7828 11574..11944 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7828.18399.1

>prot_M-pyrifera_M_contig7828.18399.1 ID=prot_M-pyrifera_M_contig7828.18399.1|Name=mRNA_M-pyrifera_M_contig7828.18399.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=326bp
MKSLESVPMVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPAGQ
ANVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEA
GESKRFAFVTYSDKESTTACLEKLDGLEVAGKALAVSFCKADPKTVPPTD
SASANWMLDDDEGEGSMKMDSANRATLMARLGGAPGSDTAAAAAAAAAAA
AAGMGQALPGMSALPGMPTLPGMSGMGMMGSMGGTGLVAQSPSAAANAAL
EAALSGTAYGAGAGTLGGGGAGVGAMGGAGMGIGGVSGGGAMAGGGVSGA
ALGAGGVGMGAMGIGAIGTGVSMGLP
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mRNA from alignment at M-pyrifera_M_contig7828:6818..11944+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7828.18399.1 ID=mRNA_M-pyrifera_M_contig7828.18399.1|Name=mRNA_M-pyrifera_M_contig7828.18399.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5127bp|location=Sequence derived from alignment at M-pyrifera_M_contig7828:6818..11944+ (Macrocystis pyrifera P11B4 male)
CAGGGATTTGCATACGTGGAAATGAAGAGCCTGGAGTCCGTGCCCATGGT
GCTGCAGCTGAACGATCGTGTCCCCGACTTCCAGAAGTTCCCGGTGATGG
TCAAGGCTAGCGAAGCTGAGAAGAACTACCTTGCCAAGCAGGTATTGTAT
TTAGATCTATTGCGGGGGACCATAGTAAATAGGACCAAACATTTTCAGTA
AAAATAGGTAAACATGTACCGGTAGGTTTTTGTGTGTACCATAGGTCCTA
CCTGGTATTTACTATGGCCCCCCATAATAGTGCATCTTAACCTATCCTTT
CGGGGATAATTCGCTCAAATTGTAGGTAGTTTGTCCCCATAACCGGACTG
CAGTCCTAAACGGGGTGACGCTGCTGCATACTACTCTGTCCCGAAATATA
ATTACCTTTGGTTTAACAGTTAGTTGTAAAATTTATTATTCTTATATTAT
AGGACAGTGATGTCGAGTAGTATTTATTAATAGAACCCAGACTCTAAACC
CCTCTATGATCCTCCCTATATCCCCCTATCTTGGCTACCGTTATTAATAA
TCATGTATCACTCTGACTGGAAATATAAGCACCTTTTGGACTGTAATATG
AATATCAAACGGAGCTTATATTCCCCGTCAGAGTGGTACAAGGTTTTGGT
TCTGATGACTATTAATAGTATATATGAAGAAAAGTAAACAATAAACCGAA
GCTGCGAGATGGATTTTTTTTAATCAAAGCTCATGTTTTGCGAGCTTGGT
GTGATTGTGCGATCGCGCGTCCTATATAATGCTCGAGTTGACGTTTTGAC
TCGATTGTTGTAACTGGTTGGGTAGCTATTTGGGTTGGTTGGAAAACGGA
GCAATTTTGGGCGATAACCAATCAGCTCTCCGTGTTTGTCGGTTTCATTT
TTTTTGTATTCTACCGGAACTGGATTTTACCGCACCCTACCTACTATCAT
GGGTTGTAGGCTATTCTGCAAGTAGCTGTGATGGGCTATTCTAAGACTCT
TTCGTTTACTGATGTACTGGTATCTATCGAGTACATGTGTGATTCAAACG
TCGTTCAACTGTACTGGCTGGTGTTATGTACGTGTGGCCTGATACTTGTG
AACACACATATATATATATAATAGTATAGTAGGGCTAAAACACCCATCCA
TAATACTGGAAACCGCTGTGAATGCAGGAGATTATATTTGTACTTTGTAT
AGTTCGACTTCGTCACTAAACATCCCTCCATACAACTGAAAACCTCTGTA
GGTGCAGGAGGCAATTACACTATTCATAGGATGGTGCATACGATTTTAGT
ACTTGAAACATCCATCCATAATACTGAAAACCGCTGTGACTGCAGGAGGA
GAAGGCCAAGAACCCCGCGGGACAGGCCAATGTCATCCTCGGGAACGCCG
CCGCCCTGGCAGGCCTCAAGCTGCACATCGGGAACCTGCACCAGAACATC
ACGGAGGATGACCTCGGGGAGATTTGCCGCTCCTTCGGAGAGGTGAGAAG
AAATAGGGAGTTTCATACACTAGGAAGGCGGCTTTCTCCTTTTTGCTTTC
ACGAAATTCGATCGGACTCCAATCGCTGCTGTTCGTCGGGGAGATCTGCG
ACGCTCCTTTCGAAGAGATCAGTAACGGGAGGAGGGGCGGGAGTTCATGA
GTTGTGAAGGCGGTTTTTATGCCTTTCACGTCCCCGAAAACGGTCCGACT
CCAATTTGTTTATTGTAGCTTTCGTTGTGGCCGTGACCATCCACCCCACC
CACCGCTTCTGATCTCGTGGCAGATGACCCAGCTCCTAAGTTTTTCTTGC
TTTTCAGTCTGTTGTTTTTGTTGTCGCTCTGCCCCCCCCCCCTACCGGCC
CGGCTTCTGTTGGCGCGAACGTGTGACCCACGCCCTGAAAAACGGCGCGG
AACACGTGACCCAGCTCTTGAGTTCGTTCTTGTTTTGTTGTTGTCGCTGT
GTCGCTGTGCCCGTCCCACCGCACGGACCAAGTGACCGACCAGATCTTTG
TTTTCGTTCTTTTCGTTGCTTCATCTGGTCGTTGCTGTGAAATCACCAGC
CACCGCACCGACCTCTTCTGCTAGCATATCAGGAGACCCAGCTCCTAATT
ATTTTGATGTTGTTGTTGTTCTTTTTGTTGATATAGGTGACCCAGCTGAT
ACTTCACCGCGACGAGGCGGGCGAGAGCAAGCGCTTCGCGTTCGTCACCT
ACTCGGACAAGGAGAGCACTACTGCCTGCCTTGAAAAGCTGGACGGTCTG
GAGGTGGCCGGCAAGGCCTTAGCGGTGAGGGGGAACGGGAGTTTTTTTTT
TCCTGGGATGGGAGTGCAGGAGGGGGCGCGGGGGGGGGGGGGGGGAGACT
GGGACGGCCCAGCCGGAGTACTCTTTGTGCGTGGTTTGTGTGGTTTTTCT
TTTTTACTCGTTTGTTTCTTGCCATCGCCAATTGACTACTGACCACGCAT
ATCTTTCGAGACTGATCGAGGGGAATCTTGAGTTTTTTTTAGAGGGGAGG
GGGGCGAAATTTAGGTATATGTTTGTGTCAAAGGGAAATCTGGGTCAGAG
GGGGGTTCTGTTTCCTGTACGTTTGGTTGGGTTTGCCTTTCTTGCGTCTG
TGTCTGGGCAGGGATATCAACCCACCAACTAGTCTACCCATCCCATGTTG
TCACATCAACCCACCCCATGGAATCCCAGCAACCCGTCCCATCAAATCCC
ATAACCCATCCCATCAAATCCCATCAACCCATCCCATATTACCCCGTCAA
TCCATCCGACATTTATCCCATTGACCCATCCCATCGACTCCCATCAACCC
ATCCTATCGTTTATATGGGAAAAACGTAGTGATCGCCCGAATGTTGGAGA
TGTCTTTGTTAGGAGTAGGAACTGTGCTCCATCTCGAAATGGACCCGTGG
TCAATGGTCAAATTACCAAAGGCAAGTAACAATTGAGCACACCTCCCCCC
CCCCCCGTCACCGAATCCCATCAATCTATCATATCTTATCCCATCAGTCC
TACCCCGTTGATCCAATGAACCTGTCCCATATTTTACGATGAGTTCATCC
CATATATTCTCATGAACCCATCCCACGTTATGCCTGCAACTTATCCCGTA
GTATCCTACCAACCCATCCCATAATATTCATCAACATATCCCGTAGTATA
TCAGATCATGCCATCTTATCCTATCGACCCATCGCATCTTATCCCATCAA
CCTAATATTATACCATCAATCCGTTCCATCTTATCGCATGAACCCGTCCC
ATATTATACCATCAACCATCCCATCTTATCCCGTCAAACAACCCATCTTA
TCCCTTCTAACCATCCCGTAGATTCGCATCAACCCATCCCGTCTTATCCC
ATCACATTTGATCCCATCAATGCTATCTATGTTATCCCATGAATCCATCC
CATATTTTATCCCGTGAGCCCATCCCATCTTATCCTATCACCCCTTCCCA
TATTATCCCATCAACCCTAACCAAGGTCTCGTTCTGCAAGGCGGACCCCA
AGACGGTACCCCCCACCGACTCGGCCTCCGCAAACTGGATGCTGGATGAC
GATGAAGGGGAGGGGAGCATGAAGATGGACAGCGCTAACCGCGCCACTCT
GATGGCTCGTCTAGGTGGAGCACCGGGCAGTGACACTGCTGCTGCTGCCG
CTGCTGCTGCTGCTGCTGCTGCTGCTGGTGGCGGCGGCGTTGGTTTTGGG
GGCGGTCAAGTTGCCCCCCCCGCGTCTACTGCTGCTTCTGCTTCTGCTTC
TGCTGCTGCTGCTTCCGCTGCGACTGCTGCTGCTGCTACCTCGGCTGCAA
TGGCAGCGGGCATGGGAGGCATTCCAGGTGGGGATGGAGAGGAGGGAGGG
GGGCGGCGGGTGTGTACTCGATATCATGCATTGCCGTAGTCATATGACCA
TAGACCCTCGCATCCCTACGTTGCCGGGGCGGAGCACGTCAGGTTTTCAC
CGCCCAGGCAGACGTTGCTTGCACCAAGCGCCCGAAGCGTCGTCAGGTGT
TGGTCGGGGACCTTCGCACCCCTACAATGCCCGGACGGAGCACGGGAGAG
GGAGTTGGGGACGGGGGGGGGAGGGGGGGGGTAGAGAGGTGGTTGCCATG
ATGGTGCGAGGGAATAGTGGAAATATGGTGTTTAGTTTCTGCTTCTCTGT
GGGTTGTGCACCGCTTATTCGATTAAATGGTTGACACACACTGTGTACTA
GACGACTAAAGCTAATCCTAACCTTCAAACTCAAACCAATCAGAGGAGCC
CTAACCCTGGCCCTGAGCCAATCCGACACAATCTAGAGAAGTGGGAAGCT
CTCCTGGCTTTTCTTGGTGGTGGTGTTGTTGGTGATAGTGGTGGTGTTGC
TGATAGTGGTGGTGTTGATGTTTTGTGGGGTGGTTTTGTTGCTGATGTTG
GTGTTGGAGTTGGTGTTGGTGATGACGGTATACTGGTGGCAGGGGTGATC
CTTGCTTCTGCGTCGGGGGCATGTATGGCCCGGTCCGTTCAGGCGAGCAT
TAGCCCCTTGAAGCATAATGGACTGCACTCCCATTTTGCTGACAAATTTG
CGTTTTTCGATTCAAATTTCTGTTTGTGTGCAACGCAGTACCAATAGGGT
TAAGAGCTTCGTGCGAAAATTTAGTCAATGGGTGCTAACGAAAGACATGG
CTCCTGCTCACGCCACCCCGCCGCTCTTCCTCTCTGCCCCCCCCCTCCCC
TTTCCTCTCCTCCACTCACTCCTCTCCCCTCCCCCCCCCCTTCCCCCGCC
CCTCAGGAATGGGGCAAGCGCTCCCCGGTATGTCCGCCCTGCCTGGTATG
CCTACCCTGCCCGGAATGTCTGGGATGGGCATGATGGGTAGCATGGGGGG
GACAGGGCTAGTGGCCCAATCCCCCTCCGCTGCCGCTAACGCCGCTCTGG
AAGCAGCTCTAAGCGGCACTGCGTATGGAGCAGGCGCGGGAACACTAGGT
GGAGGGGGGGCGGGGGTGGGAGCTATGGGCGGGGCGGGCATGGGTATTGG
AGGCGTGTCTGGGGGGGGGGCTATGGCCGGAGGGGGGGTGAGTGGGGCCG
CATTGGGCGCGGGTGGGGTGGGTATGGGAGCTATGGGAATTGGTGCTATT
GGCACCGGCGTGAGCATGGGATTGCCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7828:6818..11944+

>mRNA_M-pyrifera_M_contig7828.18399.1 ID=mRNA_M-pyrifera_M_contig7828.18399.1|Name=mRNA_M-pyrifera_M_contig7828.18399.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1956bp|location=Sequence derived from alignment at M-pyrifera_M_contig7828:6818..11944+ (Macrocystis pyrifera P11B4 male)
ATGAAGAGCCTGGAGTCCGTGCCCATGGTGCTGCAGCTGAACGATCGTGT
CCCCGACTTCCAGAAGTTCCCGGTGATGGTCAAGGCTAGCGAAGCTGAGA
AGAACTACCTTGCCAAGCAGATGAAGAGCCTGGAGTCCGTGCCCATGGTG
CTGCAGCTGAACGATCGTGTCCCCGACTTCCAGAAGTTCCCGGTGATGGT
CAAGGCTAGCGAAGCTGAGAAGAACTACCTTGCCAAGCAGGAGGAGAAGG
CCAAGAACCCCGCGGGACAGGCCAATGTCATCCTCGGGAACGCCGCCGCC
CTGGCAGGCCTCAAGCTGCACATCGGGAACCTGCACCAGAACATCACGGA
GGATGACCTCGGGGAGATTTGCCGCTCCTTCGGAGAGGAGGAGAAGGCCA
AGAACCCCGCGGGACAGGCCAATGTCATCCTCGGGAACGCCGCCGCCCTG
GCAGGCCTCAAGCTGCACATCGGGAACCTGCACCAGAACATCACGGAGGA
TGACCTCGGGGAGATTTGCCGCTCCTTCGGAGAGGTGACCCAGCTGATAC
TTCACCGCGACGAGGCGGGCGAGAGCAAGCGCTTCGCGTTCGTCACCTAC
TCGGACAAGGAGAGCACTACTGCCTGCCTTGAAAAGCTGGACGGTCTGGA
GGTGGCCGGCAAGGCCTTAGCGGTGACCCAGCTGATACTTCACCGCGACG
AGGCGGGCGAGAGCAAGCGCTTCGCGTTCGTCACCTACTCGGACAAGGAG
AGCACTACTGCCTGCCTTGAAAAGCTGGACGGTCTGGAGGTGGCCGGCAA
GGCCTTAGCGGTCTCGTTCTGCAAGGCGGACCCCAAGACGGTACCCCCCA
CCGACTCGGCCTCCGCAAACTGGATGCTGGATGACGATGAAGGGGAGGGG
AGCATGAAGATGGACAGCGCTAACCGCGCCACTCTGATGGCTCGTCTAGG
TGGAGCACCGGGCAGTGACACTGCTGCTGCTGCCGCTGCTGCTGCTGCTG
CTGCTGCTGCTGGTCTCGTTCTGCAAGGCGGACCCCAAGACGGTACCCCC
CACCGACTCGGCCTCCGCAAACTGGATGCTGGATGACGATGAAGGGGAGG
GGAGCATGAAGATGGACAGCGCTAACCGCGCCACTCTGATGGCTCGTCTA
GGTGGAGCACCGGGCAGTGACACTGCTGCTGCTGCCGCTGCTGCTGCTGC
TGCTGCTGCTGCTGGAATGGGGCAAGCGCTCCCCGGTATGTCCGCCCTGC
CTGGTATGCCTACCCTGCCCGGAATGTCTGGGATGGGCATGATGGGTAGC
ATGGGGGGGACAGGGCTAGTGGCCCAATCCCCCTCCGCTGCCGCTAACGC
CGCTCTGGAAGCAGCTCTAAGCGGCACTGCGTATGGAGCAGGCGCGGGAA
CACTAGGTGGAGGGGGGGCGGGGGTGGGAGCTATGGGCGGGGCGGGCATG
GGTATTGGAGGCGTGTCTGGGGGGGGGGCTATGGCCGGAGGGGGGGTGAG
TGGGGCCGCATTGGGCGCGGGTGGGGTGGGTATGGGAGCTATGGGAATTG
GTGCTATTGGCACCGGCGTGAGCATGGGATTGCCTGAATGGGGCAAGCGC
TCCCCGGTATGTCCGCCCTGCCTGGTATGCCTACCCTGCCCGGAATGTCT
GGGATGGGCATGATGGGTAGCATGGGGGGGACAGGGCTAGTGGCCCAATC
CCCCTCCGCTGCCGCTAACGCCGCTCTGGAAGCAGCTCTAAGCGGCACTG
CGTATGGAGCAGGCGCGGGAACACTAGGTGGAGGGGGGGCGGGGGTGGGA
GCTATGGGCGGGGCGGGCATGGGTATTGGAGGCGTGTCTGGGGGGGGGGC
TATGGCCGGAGGGGGGGTGAGTGGGGCCGCATTGGGCGCGGGTGGGGTGG
GTATGGGAGCTATGGGAATTGGTGCTATTGGCACCGGCGTGAGCATGGGA
TTGCCT
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