mRNA_M-pyrifera_M_contig78247.18397.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: A0A7S1CFM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFM2_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.990e-33 Identity = 70/149 (46.98%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAATALLH RD ++AA V+DSPFADLR+L E+V + G +P W VSA + +++++L+ LD LKPI + FVPALF G+ D+ I P HS A+ AY G+ L +P HN RP F +A FLR +MR+
Sbjct: 183 GRSMGAATALLHGHRDPSIAAFVLDSPFADLRQLALEMVEMGKAEAGYRVPGWVVSAAIKMVRSSVLKKAALDIDKLKPIENVGTCFVPALFAAGEDDSFISPAHSQAIHDAYAGDKNLVLLPGD-HNSPRPRFFHDSAAIFLRTAMRV 330
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: A0A5A8CZM0_CAFRO (Hydrolase_4 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CZM0_CAFRO) HSP 1 Score: 128 bits (321), Expect = 4.930e-32 Identity = 64/149 (42.95%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAAT+LLH PRD + +++DSPFADL++LI+E+V Q GV +P+W V+ +Q ++ + TG+D LKP A+A V AL G DT + PHH++A+ Y G +L + Q HN RP FQ A FLR+++ +
Sbjct: 199 GRSMGAATSLLHCPRDPLIDGMILDSPFADLQQLIEEIVERFRSQAGVTVPSWVTGTVIRMVQNSVFKRTGMDILRLKPAATAYLCHVRALITAGRDDTFVAPHHATAIYEEYRGAKELVLLDGQDHNSQRPRWFQDRAGIFLRQALHI 347
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: A0A5A8DL89_CAFRO (Rab-GAP TBC domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DL89_CAFRO) HSP 1 Score: 128 bits (321), Expect = 1.880e-31 Identity = 64/149 (42.95%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAAT+LLH PRD + +++DSPFADL++LI+E+V Q GV +P+W V+ +Q ++ + TG+D LKP A+A V AL G DT + PHH++A+ Y G +L + Q HN RP FQ A FLR+++ +
Sbjct: 929 GRSMGAATSLLHCPRDPLIDGMILDSPFADLQQLIEEIVERFRSQAGVTVPSWVTGTVIRMVQNSVFKRTGMDILRLKPAATAYLCHVRALITAGRDDTFVAPHHATAIYEEYRGAKELVLLDGQDHNSQRPRWFQDRAGIFLRQALHI 1077
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: A0A5A8EKF1_CAFRO (Hydrolase_4 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EKF1_CAFRO) HSP 1 Score: 127 bits (319), Expect = 2.540e-31 Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAAT+LLH PRD + +++DSPFADL++LI+E+V Q GV P+W V+ +Q ++ + TG+D LKP A+A V AL G DT + PHH++A+ Y G +L + Q HN RP FQ A FLR+++ +
Sbjct: 199 GRSMGAATSLLHCPRDPLIDGMILDSPFADLQQLIEEIVERFRSQAGVTAPSWVTGTVIRMVQNSVFKRTGMDILRLKPAATAYLCHVRALITAGRDDTFVAPHHATAIYEEYRGAKELVLLDGQDHNSQRPRWFQDRAGIFLRQALHI 347
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: H3H0I5_PHYRM (RanBP2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0I5_PHYRM) HSP 1 Score: 117 bits (292), Expect = 1.060e-27 Identity = 66/149 (44.30%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAATALLHA RD ++A +VVDS FA L +L++EVV + RQ G+ LP + V VL +++++ + D L PI AP FVPALF + D+ I PHHS + AYGG+ L + D HN RP +A FL+ ++++
Sbjct: 250 GRSMGAATALLHADRDPSIAGIVVDSAFASLEQLVEEVV-ERGRQEGLTLPGFLVKIVLKFIRSSVKKRAHFDLRRLAPIDHAPVSFVPALFVAAEHDSFIAPHHSDQIYAAYGGDKNLVKV-DGDHNSSRPQFLLDSAAIFLQTALQV 396
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: M4BGZ5_HYAAE (RanBP2-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGZ5_HYAAE) HSP 1 Score: 117 bits (292), Expect = 1.070e-27 Identity = 66/149 (44.30%), Postives = 90/149 (60.40%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAATALLHA RD ++A +VVDS FA L +L++EVV D RQ G+ LP + V VL ++ ++ + D L PI AP FVPALF + D+ I PHHS + YGG+ L + D HN RP +A FL+ ++++
Sbjct: 243 GRSMGAATALLHADRDPSIAGIVVDSAFASLEQLVEEVV-DRGRQEGLTLPGFLVKIVLKFIRLSVKKRAHFDLQQLAPIDHAPVSFVPALFVAAEHDSFITPHHSDQIFAVYGGDKNLVKV-DGDHNSSRPQFLLDSAAIFLQTALQV 389
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: A0A0W8DHP2_PHYNI (RanBP2-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DHP2_PHYNI) HSP 1 Score: 115 bits (288), Expect = 3.240e-27 Identity = 65/149 (43.62%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAATALLHA RD ++A +VVDS FA L +L++EVV + RQ G+ LP + V VL +++++ + + L PI AP FVPALF + D+ I PHHS + AYGG+ L + D HN RP +A FL+ ++++
Sbjct: 221 GRSMGAATALLHADRDPSIAGIVVDSAFASLEQLVEEVV-ERGRQEGLTLPGFLVKIVLKFIRSSVKKRAHFNLRRLAPIDHAPVSFVPALFVAAEHDSFIAPHHSDQIFAAYGGDKNLVKV-DGDHNSSRPQFLLDSAAIFLQTALQV 367
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: V9DZ57_PHYPR (RanBP2-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=V9DZ57_PHYPR) HSP 1 Score: 115 bits (288), Expect = 3.750e-27 Identity = 65/149 (43.62%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAATALLHA RD ++A +VVDS FA L +L++EVV + RQ G+ LP + V VL +++++ + + L PI AP FVPALF + D+ I PHHS + AYGG+ L + D HN RP +A FL+ ++++
Sbjct: 255 GRSMGAATALLHADRDPSIAGIVVDSAFASLEQLVEEVV-ERGRQEGLTLPGFLVKIVLKFIRSSVKKRAHFNLRRLAPIDHAPVSFVPALFVAAEHDSFIAPHHSDQIFAAYGGDKNLVKV-DGDHNSSRPQFLLDSAAIFLQTALQV 401
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: A0A3M6VAZ2_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAZ2_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.940e-27 Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLRRSMRL 447
GRSMGAATALLHA RD ++A +VVDS FA L +L++EVV D RQ G+ LP + V VL +++++ + D + PI A FVP LF + D+ I PHHS + AYGG+ L + D HN RP +A FL+ ++++
Sbjct: 255 GRSMGAATALLHADRDPSIAGIVVDSAFASLGQLVEEVV-DRGRQEGLTLPGFLVKIVLKFIRSSVKKRAHFDLQRISPIDHAAMSFVPVLFVAAEHDSFIAPHHSDQIFAAYGGDKNLVKV-DGDHNSSRPQFLLDSAAIFLQTALQV 401
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Match: A0A7S0IS30_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IS30_9EUKA) HSP 1 Score: 112 bits (279), Expect = 4.340e-27 Identity = 61/146 (41.78%), Postives = 91/146 (62.33%), Query Frame = 1
Query: 1 GRSMGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQL-GVP-LPAWGVSAVLTALQATMLRSTGLDFSGLKPIASAPRMFVPALFCVGDKDTLIRPHHSSALMHAYGGETQLFSIPDQGHNEMRPATFQGTAKEFLR 432
GRSMGA++A+LH RDA++A +V+DSPFA L ++ E+V D + + G+P P++ V L + +++ G D L+PI AP F+PALF G +D+L+RPHH+ + AY G+ L S HNE+RP F +A FL+
Sbjct: 34 GRSMGASSAVLHGARDASLAGMVLDSPFASLEQVALELVADAATRFEGLPNFPSFMVRGALRVVASSVKSRAGFDLYKLRPIDFAPTCFIPALFGAGQEDSLVRPHHAKQIADAYAGDKNLVSFGGD-HNELRPGFFIDSACIFLK 178 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78247.18397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78247.18397.1 >prot_M-pyrifera_M_contig78247.18397.1 ID=prot_M-pyrifera_M_contig78247.18397.1|Name=mRNA_M-pyrifera_M_contig78247.18397.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp MGAATALLHAPRDATVAALVVDSPFADLRELIQEVVLDVSRQLGVPLPAWback to top mRNA from alignment at M-pyrifera_M_contig78247:439..885- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78247.18397.1 ID=mRNA_M-pyrifera_M_contig78247.18397.1|Name=mRNA_M-pyrifera_M_contig78247.18397.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig78247:439..885- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78247:439..885- >mRNA_M-pyrifera_M_contig78247.18397.1 ID=mRNA_M-pyrifera_M_contig78247.18397.1|Name=mRNA_M-pyrifera_M_contig78247.18397.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig78247:439..885- (Macrocystis pyrifera P11B4 male)back to top |