mRNA_M-pyrifera_M_contig78236.18393.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78236.18393.1
Unique NamemRNA_M-pyrifera_M_contig78236.18393.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: A0A2P6N9X2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N9X2_9EUKA)

HSP 1 Score: 172 bits (437), Expect = 5.300e-47
Identity = 105/257 (40.86%), Postives = 168/257 (65.37%), Query Frame = 1
Query:   25 PSPASFDFLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLF-LSAEDRLKSSYTSVGASYAPDLILQGLIKPEKVKDADVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRLPSDLREGIVLQSRRLLVRKAVLLIKYVEAR--KSDHATLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPAT-IEARFFELFFESF 783
            PS  + +F+++ V+SHLQTHGS++++G+D E I+  ID+L +F +S  +R +SS+    +++ PDL +QG++    + + +VIQS+LP+TV+DL T  + +T P+H + +LRK + + +L     KS  +  W +Q  +F  VK  +P V+ +L E++  P+ LR   ++QS +LLVRKA+ LI+YV+A   +S    L  + +KK+R  + +  ESDF ++L +AE   PGIY  LAGDPA  IE +F ELF ESF
Sbjct:  256 PSQYTPEFISRVVTSHLQTHGSTIIIGSDPERINTFIDSLCMFNISWNERHRSSHCRSPSTFIPDLAIQGVVTTT-ISEEEVIQSMLPSTVVDLNTFIVKQTPPFHEYNILRKNYLRSQLDSRD-KSLQENPWKAQ-ELFRVVKTGAPLVDKLLGELYGCPTYLRTPFLVQSVKLLVRKAIQLIRYVQAEIERSHVRQLEANTVKKIRVHMDLGQESDFYLLLGIAEKLFPGIYVMLAGDPAFFIELQFIELF-ESF 508          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: A7SJN8_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SJN8_NEMVE)

HSP 1 Score: 161 bits (407), Expect = 1.170e-42
Identity = 105/252 (41.67%), Postives = 150/252 (59.52%), Query Frame = 1
Query:   46 FLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYTSVGAS---YAPDLILQGLIKPEKVKDAD---------VIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRLP--SDLREGIVLQSRRLLVRKAVLLIKYVEAR-KSDHATLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPATIEAR 756
            FL + ++SHLQT GS++V+G  +  ++ MI++L+LFLS+ +R KS Y   GA    Y  DL LQG+IK     D D         VI S+ PTT++D+ T  + +T+PYH H V+RKEF  +EL  +    +    + S + +F P ++    V+  +N++  LP   D+R G V   RRLLVRK + LIKYVEAR K     L  +  ++LR DL +  E+DFGIVLA AE + PG+Y+ L GDP    AR
Sbjct:  254 FLRRVITSHLQTFGSTMVIGQSISRVNLMINSLALFLSSNERQKSRYAVDGADTDVYDTDLYLQGVIK-----DGDGNFTLPVKGVITSIYPTTLVDVDTCDVKKTYPYHEHSVIRKEFLDLELALMWEGHEGAPVYPS-IGLFHPAEDIGLLVQIFINDMNVLPFAPDVRAGFVETFRRLLVRKTLALIKYVEARSKRGRIALEYAAKRQLRHDLQLNTEADFGIVLACAEKHKPGLYTFLMGDPRHAVAR 499          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: A0A6P8IMX0_ACTTE (guanine nucleotide exchange C9orf72-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IMX0_ACTTE)

HSP 1 Score: 156 bits (394), Expect = 5.380e-41
Identity = 99/249 (39.76%), Postives = 150/249 (60.24%), Query Frame = 1
Query:   46 FLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYTSVGAS-----YAPDLILQGLIKPEKVKDA----DVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRLPS--DLREGIVLQSRRLLVRKAVLLIKYVEARKSDHA-TLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPATIEAR 756
            FL +A++SHLQT GS++V+G   E ++ M++TL LFLS E+R +S Y           Y PDL +QGL+K E    A     +I S  P+T+ID+   ++ +T PYH H V+R+EF  +EL  L    +    + S + +F P+ +   FV+ ++N+   LP+  D+R+G +    R+L RKA+ LIKYVEA+ S  + +L ++  ++LR DL +  E+DF IVL  AE + PG+YS L GDP    AR
Sbjct:  221 FLRRAITSHLQTFGSTLVIGLSAERVNLMVNTLGLFLSQEERNRSRYAVESKEKLHDVYDPDLYVQGLLKDEDGSFALPVKGIITSQFPSTLIDVDKMEVKQTCPYHEHCVIRQEFLDIELALLWENQEDAPVYPS-LGLFHPMDDIGLFVQTLMNDASLLPAVCDVRQGFISSFLRVLDRKALALIKYVEAKSSKGSVSLEHTTKRQLRHDLQLTTEADFFIVLVRAEKHKPGLYSFLMGDPTXSVAR 468          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: L8HER7_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HER7_ACACA)

HSP 1 Score: 159 bits (401), Expect = 5.540e-41
Identity = 94/263 (35.74%), Postives = 154/263 (58.56%), Query Frame = 1
Query:   40 FDFLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYTSVGASYAPDLILQGLIKPEKVKDADVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGS----------------------WASQVSIFSPVKESSPFVENMLNEVFRLPSDLREGIVLQSRRLLVRKAVLLIKYVEA--RKSDHATLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPATIEAR 756
            ++FL +A++SHLQTHGS+VV+G+D ++++                +S   + GA+Y PDLILQG+ +   +   DVI S+LPTT+ID+  + +  T  YH +  +R+E+   E+ +L  ++ + G                         S  ++FS +KE++P V+ ML E F+LP  LREG ++Q  R++ R+AV LIKY EA  ++ +   L    I+++R DL ++ ++DF ++L +AE  SPGIY++LAGDP  +E R
Sbjct:  271 YEFLARAITSHLQTHGSTVVIGSDEDSVNTK--------------RSRRAADGAAYIPDLILQGITRRTSILREDVILSMLPTTLIDVDRQTVKHTRVYHEYIHMRREYMSGEIERLGAETRSGGEDGRRRIIPIRXXXXXXXXXXXXXXSLPNLFSQLKEAAPCVDQMLLEAFKLPPALREGYIVQWIRVISRRAVTLIKYAEAETKRLNATVLELETIQRIRQDLKLSADADFLVILGVAEKLSPGIYTTLAGDPLLMEER 519          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: L8HH35_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HH35_ACACA)

HSP 1 Score: 150 bits (378), Expect = 2.600e-38
Identity = 101/272 (37.13%), Postives = 159/272 (58.46%), Query Frame = 1
Query:    1 KTYFSFNKPSPASFD--FLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYTSVGASYAPDLILQGLIKPEKVKDADVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKE-FQKMELRKLSGKSDAKGSWASQVSIFSPVK--------ESSPFVENMLNEVFRLPSDLREGIVLQSRRLLVRKAVLLIKYVEARKSDHATLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPATIEARFFELFFESF 783
            +T+F  + P  A++D  FL +A++SHL T   +VV+G+D+E ++  +D+LSLFL   +   S+    GA + PDL+LQGL   E +KD  VI    P TVIDL  +++ ++ P H H  LR++ F  +   +      A  +   +     P +        E S +V  ++ E +RLP   REG V Q+ R+L R+A LL+KYV+ + +  + +    ++ +RA+L +  E DF +VLA+AE  SPGIY++L G+PA +E +F ELF ESF
Sbjct:  268 RTFFCRDHPRFAAYDPTFLHRAITSHLVTQHHTVVMGSDLELVNAWVDSLSLFLRKSELRLSARAGPGAVFVPDLVLQGLPHQE-LKDEAVIWCRGPLTVIDLDQERVRQSLPRHQHAALRRDYFDALRFGQGPAPLAASPTPLDKPRPLLPEEGLLRDFGGEWSGWVAEVMEEAWRLPVSTREGFVRQAMRILTRRAALLVKYVDYQLARTSFVDMGLVQSMRAELELEPEQDFLVVLAVAERLSPGIYTTLVGNPAALEDKFIELF-ESF 537          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: UPI00077AC964 (protein C9orf72-like isoform X2 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077AC964)

HSP 1 Score: 139 bits (349), Expect = 1.700e-34
Identity = 92/258 (35.66%), Postives = 151/258 (58.53%), Query Frame = 1
Query:    1 KTYFSFNKPSPASFDFLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYT-----SVGASYAPDLILQGLIK----PEKVKDADVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRLPS--DLREGIVLQSRRLLVRKAVLLIKYVEARKSDHAT-LHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDP 738
            +T F   K +     FL + ++SHLQT GS++V+G  ++ ++ M++TL+L L  E+R +S Y      S    Y  DL +QGL++    P+++    +I S LP+T++DL T ++ +THP++ H ++RKEF  +EL  L  +      + + + +F   +E    V++ ++++  LP    +REG +    RLL RKA+ LIKYVEA+ S  A  L  +  ++LR D  +A E+D+ I+L  AE   PGIY+ L GDP
Sbjct:  210 ETAFGLGKANIFDNIFLMRVITSHLQTFGSTLVVGKALDKVNMMVNTLALLLPVEERRRSRYAVETLKSDPNLYESDLFVQGLLRSSKEPDRLPVKGIITSSLPSTLVDLDTNEVKQTHPFNEHVIIRKEFIDIELALLLEEVQDAPMFPA-LGLFHNSEEVGTLVQSFIHDLSLLPCVCGVREGFIDNFLRLLDRKALALIKYVEAKSSFGAVPLDQTAKRQLRQDQQLATEADYCIILTRAEKLHPGIYTFLTGDP 466          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: A0A0D2WTW9_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WTW9_CAPO3)

HSP 1 Score: 137 bits (344), Expect = 2.100e-33
Identity = 87/242 (35.95%), Postives = 147/242 (60.74%), Query Frame = 1
Query:   52 TKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSY-TSVGASYAPDLILQGLI-KPEK---VKDADVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRL-PSDLREGIVLQSRRLLVRKAVLLIKYVEARKSDHATL-HNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPATIEAR 756
            ++ ++SHLQT   SVV+G+D++ ++ MI+TL+LF+   DR +    T +   Y P+L++QGL  KP +    +D ++I + LP+T+IDL T+++ RT+ +H ++  R EF   E+ +L  K      W    ++F  VK+++P V++ L+E+ R+ P  L+E    Q +RLL R+A+ LIKY+EA  +        + +K +++DL +  E+DF IVLA+AE    G +    GDP   EA+
Sbjct:  317 SRVLTSHLQTCMCSVVVGSDLDQVNAMINTLALFMPGNDRQRCRLSTDLNEKYNPELMIQGLFYKPGESWVARDEEIILNRLPSTIIDLNTQEVHRTNLFHQYKTQRNEFLDSEINRLKDKI-----WT-PTALFRSVKDAAPSVKSFLHEISRIRPGFLQEAFAQQFQRLLTRRAMGLIKYLEAELNSGTRFDRENSMKLIKSDLGLNAENDFFIVLAIAERLRAGTFVDAMGDPRLTEAK 552          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: UPI0009E4CFEE (protein C9orf72-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4CFEE)

HSP 1 Score: 131 bits (330), Expect = 7.950e-32
Identity = 94/255 (36.86%), Postives = 149/255 (58.43%), Query Frame = 1
Query:   46 FLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYTSVGAS-----YAPDLILQGLIKPEKVKDA----DVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRLP--SDLREGIVLQSRRLLVRKAVLLIKYVEARKSDHATLHNSEIKK--LRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPATIEARFFELF 771
            FL + ++SHLQT GS++V+G  ++ ++ M++TL+L LS+E+R +S Y     S     Y  DL +QGL+K  K   +     +I S LP+T++D+ T ++ +T P++ H V+R+EF  +EL  L  +++    + + + +F    E +  V+ ++ ++  LP    +REG +    RLL RKA+ LIKY+EA KS   T+    + K  LR DL +  E+D+ IVL  AE   PGIY+ L GDP    AR   LF
Sbjct:  219 FLRRVITSHLQTFGSTLVVGKALDKVNLMVNTLALLLSSEERQRSRYAVETLSNDSDLYDSDLFVQGLLKSSKESFSLPVKGIITSSLPSTLVDMDTGEVKQTCPFNEHTVIRREFIDIELALLLEEAEDVPVFPA-LGLFHNSDEIALLVQTLMLDLNLLPYVCGVREGFIDNFLRLLDRKALALIKYLEA-KSSCGTVPLDYVAKRQLRQDLQLGTEADYSIVLTRAEKLHPGIYTFLQGDPRQNVARVQALF 471          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: UPI000719A8EC (protein C9orf72-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719A8EC)

HSP 1 Score: 125 bits (315), Expect = 8.220e-30
Identity = 85/239 (35.56%), Postives = 131/239 (54.81%), Query Frame = 1
Query:   46 FLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYTSVGA--SYAPDLILQGLIKPEK----VKDADVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKL-SGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRLPSD--LREGIVLQSRRLLVRKAVLLIKYVEARKSDHATLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGD 735
            F+ KA++SH+QT G +VV+G + + +++MI+TL +FL  E+R  S Y    +   Y P L LQGL+   +    +   DV+ S  PTTV+D+ T ++ ++ P H H   R +    E+  + +GK + +      V +F PV      V+N L E+F+L     +RE  +    RLL RKA+ LIKYVE   +       + ++KL+ DL +  E DF IVLA AE   PG +  L G+
Sbjct:  206 FIAKAIASHMQTFGCTVVIGQNAQTVNEMINTLGIFLLPEERQCSRYVLEDSLWPYHPSLFLQGLLMERQGETNISARDVLCSRYPTTVVDVTTSEVRQSPPLHEHVHRRCDALAQEIHCIWTGKREDE--LYPTVGVFQPVDYPDTLVQNFLYELFQLSGSNGVRETYIQNFIRLLSRKALALIKYVETHTNFGRDPLKTSMRKLKHDLDLGQEGDFRIVLAQAEKLKPGFFCFLIGN 442          
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Match: A0A8B7Z3J4_ACAPL (guanine nucleotide exchange C9orf72-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z3J4_ACAPL)

HSP 1 Score: 125 bits (313), Expect = 1.930e-29
Identity = 93/240 (38.75%), Postives = 132/240 (55.00%), Query Frame = 1
Query:   43 DFLTK-AVSSHLQTHGSSVVLGADVEAIDKMIDTLSLFLSAEDRLKSSYTS-VGASYAPDLILQGLIKPEKVKD---ADVIQSLLPTTVIDLVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPVKESSPFVENMLNEVFRLPSD--LREGIVLQSRRLLVRKAVLLIKYVEARKSDHATLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPA 741
            D  TK A++SHLQT G S++LG     ++ MI TL+LFLS  +R    Y   V   Y  D+++QG +K     D     ++ S  PTT+IDLVT ++ +T  Y+ H   R E    EL+ L   SD    + S V  FS   E+   V+    E+ RL  +  +RE  + +  RLL RKAV LIKYVE   +         +K+L++DLH+  E DF IV+AMAE   PG+Y+ + G+PA
Sbjct:  219 DQFTKIAIASHLQTCGCSIILGNTAADVNMMISTLALFLSPTERHCCLYLDDVPRVYQKDVLIQGFLKNSISLDDYLRVIMTSQYPTTLIDLVTLEVKQTLHYNQHAYRRHEATSQELQCLWLNSDEPLRY-SPVVHFSNKPEAETIVQKFWKEINRLQDNCRIRETYIEEFLRLLDRKAVSLIKYVEEETNRGTKPSRLVLKRLKSDLHLIPEGDFRIVIAMAEKLQPGVYTLVCGNPA 457          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78236.18393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6N9X2_9EUKA5.300e-4740.86Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A7SJN8_NEMVE1.170e-4241.67Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A6P8IMX0_ACTTE5.380e-4139.76guanine nucleotide exchange C9orf72-like n=1 Tax=A... [more]
L8HER7_ACACA5.540e-4135.74Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
L8HH35_ACACA2.600e-3837.13Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
UPI00077AC9641.700e-3435.66protein C9orf72-like isoform X2 n=3 Tax=Acropora T... [more]
A0A0D2WTW9_CAPO32.100e-3335.95Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
UPI0009E4CFEE7.950e-3236.86protein C9orf72-like n=1 Tax=Orbicella faveolata T... [more]
UPI000719A8EC8.220e-3035.56protein C9orf72-like n=1 Tax=Priapulus caudatus Ta... [more]
A0A8B7Z3J4_ACAPL1.930e-2938.75guanine nucleotide exchange C9orf72-like n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78236contigM-pyrifera_M_contig78236:205..990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score165.2
Seed ortholog evalue4e-38
Seed eggNOG ortholog45351.EDO36091
Preferred nameC9orf72
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0000902,GO:0000904,GO:0000932,GO:0001932,GO:0001933,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005764,GO:0005768,GO:0005773,GO:0005776,GO:0006810,GO:0006897,GO:0006914,GO:0006996,GO:0007034,GO:0007041,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0008152,GO:0009056,GO:0009653,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009987,GO:0010494,GO:0010506,GO:0010508,GO:0010563,GO:0010605,GO:0010646,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016239,GO:0016241,GO:0017016,GO:0017137,GO:0019220,GO:0019222,GO:0019899,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0030030,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031331,GO:0031399,GO:0031400,GO:0031410,GO:0031965,GO:0031967,GO:0031975,GO:0031982,GO:0032006,GO:0032045,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033267,GO:0034063,GO:0034622,GO:0035770,GO:0036464,GO:0036477,GO:0040007,GO:0042325,GO:0042326,GO:0042995,GO:0043005,GO:0043025,GO:0043204,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044087,GO:0044088,GO:0044092,GO:0044237,GO:0044248,GO:0044295,GO:0044297,GO:0044304,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045936,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0051020,GO:0051098,GO:0051100,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051493,GO:0060255,GO:0060560,GO:0061564,GO:0061919,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071826,GO:0071840,GO:0080090,GO:0097447,GO:0097458,GO:0097708,GO:0098657,GO:0110053,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0150034,GO:1902115,GO:1902531,GO:1902774,GO:1902903,GO:1903432,GO:1904424,GO:1904425,GO:1990138,GO:1990904,GO:2000785
EggNOG free text desc.late endosome to lysosome transport
EggNOG OGs28KBU@1,2QSST@2759,38DYE@33154,3BI9R@33208
COG Functional cat.S
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size786
Cds size786
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816684.0367742-CDS-M-pyrifera_M_contig78236:204..9901622816684.0367742-CDS-M-pyrifera_M_contig78236:204..990Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78236 205..990 -
1692278117.9597094-CDS-M-pyrifera_M_contig78236:204..9901692278117.9597094-CDS-M-pyrifera_M_contig78236:204..990Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78236 205..990 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78236.18393.1prot_M-pyrifera_M_contig78236.18393.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78236 205..990 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78236.18393.1

>prot_M-pyrifera_M_contig78236.18393.1 ID=prot_M-pyrifera_M_contig78236.18393.1|Name=mRNA_M-pyrifera_M_contig78236.18393.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp
KTYFSFNKPSPASFDFLTKAVSSHLQTHGSSVVLGADVEAIDKMIDTLSL
FLSAEDRLKSSYTSVGASYAPDLILQGLIKPEKVKDADVIQSLLPTTVID
LVTKQITRTHPYHVHRVLRKEFQKMELRKLSGKSDAKGSWASQVSIFSPV
KESSPFVENMLNEVFRLPSDLREGIVLQSRRLLVRKAVLLIKYVEARKSD
HATLHNSEIKKLRADLHVAHESDFGIVLAMAETYSPGIYSSLAGDPATIE
ARFFELFFESF*
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mRNA from alignment at M-pyrifera_M_contig78236:205..990-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78236.18393.1 ID=mRNA_M-pyrifera_M_contig78236.18393.1|Name=mRNA_M-pyrifera_M_contig78236.18393.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig78236:205..990- (Macrocystis pyrifera P11B4 male)
AAGACGTACTTCTCCTTCAACAAGCCGAGCCCAGCCAGCTTTGATTTCCT CACAAAGGCTGTCAGCTCCCATCTACAGACTCACGGGTCTTCCGTGGTGC TTGGCGCAGACGTTGAGGCGATCGACAAGATGATTGACACTCTGTCTCTC TTCCTGTCGGCAGAAGACCGACTCAAGTCATCGTACACAAGTGTGGGTGC TTCGTATGCGCCCGACCTCATTCTGCAAGGCCTCATCAAGCCAGAGAAGG TGAAGGATGCAGACGTCATCCAGTCTCTTCTGCCCACGACTGTGATCGAC CTTGTCACCAAGCAGATCACCAGGACACATCCCTACCACGTCCATAGGGT GCTGAGGAAGGAGTTCCAGAAGATGGAGCTTCGAAAACTCTCTGGAAAGA GCGATGCGAAGGGTTCGTGGGCCTCGCAAGTGAGCATCTTCTCTCCTGTG AAGGAGAGCTCTCCCTTTGTAGAGAACATGCTCAACGAAGTGTTTCGTCT GCCCAGTGACCTGAGGGAGGGCATAGTGCTCCAGTCGAGGCGGCTCCTCG TGAGGAAGGCTGTACTCCTCATCAAGTACGTCGAGGCGAGGAAGTCTGAC CATGCCACGCTTCACAACAGCGAAATCAAGAAGCTGCGGGCAGACCTCCA CGTCGCACACGAGAGCGATTTCGGTATCGTTCTTGCCATGGCTGAGACGT ACTCGCCAGGAATCTACTCCTCCCTCGCCGGGGACCCCGCCACCATAGAG GCGCGGTTCTTTGAGCTGTTCTTCGAGAGCTTCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78236:205..990-

>mRNA_M-pyrifera_M_contig78236.18393.1 ID=mRNA_M-pyrifera_M_contig78236.18393.1|Name=mRNA_M-pyrifera_M_contig78236.18393.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig78236:205..990- (Macrocystis pyrifera P11B4 male)
AAGACGTACTTCTCCTTCAACAAGCCGAGCCCAGCCAGCTTTGATTTCCT
CACAAAGGCTGTCAGCTCCCATCTACAGACTCACGGGTCTTCCGTGGTGC
TTGGCGCAGACGTTGAGGCGATCGACAAGATGATTGACACTCTGTCTCTC
TTCCTGTCGGCAGAAGACCGACTCAAGTCATCGTACACAAGTGTGGGTGC
TTCGTATGCGCCCGACCTCATTCTGCAAGGCCTCATCAAGCCAGAGAAGG
TGAAGGATGCAGACGTCATCCAGTCTCTTCTGCCCACGACTGTGATCGAC
CTTGTCACCAAGCAGATCACCAGGACACATCCCTACCACGTCCATAGGGT
GCTGAGGAAGGAGTTCCAGAAGATGGAGCTTCGAAAACTCTCTGGAAAGA
GCGATGCGAAGGGTTCGTGGGCCTCGCAAGTGAGCATCTTCTCTCCTGTG
AAGGAGAGCTCTCCCTTTGTAGAGAACATGCTCAACGAAGTGTTTCGTCT
GCCCAGTGACCTGAGGGAGGGCATAGTGCTCCAGTCGAGGCGGCTCCTCG
TGAGGAAGGCTGTACTCCTCATCAAGTACGTCGAGGCGAGGAAGTCTGAC
CATGCCACGCTTCACAACAGCGAAATCAAGAAGCTGCGGGCAGACCTCCA
CGTCGCACACGAGAGCGATTTCGGTATCGTTCTTGCCATGGCTGAGACGT
ACTCGCCAGGAATCTACTCCTCCCTCGCCGGGGACCCCGCCACCATAGAG
GCGCGGTTCTTTGAGCTGTTCTTCGAGAGCTTCTAGAAGACGTACTTCTC
CTTCAACAAGCCGAGCCCAGCCAGCTTTGATTTCCTCACAAAGGCTGTCA
GCTCCCATCTACAGACTCACGGGTCTTCCGTGGTGCTTGGCGCAGACGTT
GAGGCGATCGACAAGATGATTGACACTCTGTCTCTCTTCCTGTCGGCAGA
AGACCGACTCAAGTCATCGTACACAAGTGTGGGTGCTTCGTATGCGCCCG
ACCTCATTCTGCAAGGCCTCATCAAGCCAGAGAAGGTGAAGGATGCAGAC
GTCATCCAGTCTCTTCTGCCCACGACTGTGATCGACCTTGTCACCAAGCA
GATCACCAGGACACATCCCTACCACGTCCATAGGGTGCTGAGGAAGGAGT
TCCAGAAGATGGAGCTTCGAAAACTCTCTGGAAAGAGCGATGCGAAGGGT
TCGTGGGCCTCGCAAGTGAGCATCTTCTCTCCTGTGAAGGAGAGCTCTCC
CTTTGTAGAGAACATGCTCAACGAAGTGTTTCGTCTGCCCAGTGACCTGA
GGGAGGGCATAGTGCTCCAGTCGAGGCGGCTCCTCGTGAGGAAGGCTGTA
CTCCTCATCAAGTACGTCGAGGCGAGGAAGTCTGACCATGCCACGCTTCA
CAACAGCGAAATCAAGAAGCTGCGGGCAGACCTCCACGTCGCACACGAGA
GCGATTTCGGTATCGTTCTTGCCATGGCTGAGACGTACTCGCCAGGAATC
TACTCCTCCCTCGCCGGGGACCCCGCCACCATAGAGGCGCGGTTCTTTGA
GCTGTTCTTCGAGAGCTTCTAG
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