mRNA_M-pyrifera_M_contig78182.18381.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A2D6HK49_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HK49_9BACT) HSP 1 Score: 147 bits (372), Expect = 1.010e-41 Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 4 VRAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREA 510
+ AGTA+ M + +LV S+LV+E RV++ + + G IET Y +A +R FWGP +R VRIPGGVLPDGRG+LL G+ ++ GED LLFLS G +R+PVGLAQG++RV T LDGSR + R G L LV+ +G + +A+ Y++ VA + AA A+R+A
Sbjct: 27 IDAGTAVHMDITELVDQSDLVLEGRVIDRNVRQDSRGRIETTYRIAVERTFWGPDQI--LRRVRIPGGVLPDGRGLLLPGMPGIDKGEDVLLFLSRAGATGIRVPVGLAQGKFRVLTSLDGSRRLVRDQGELSLVDPTSGTIHEAERRAYFGYSETVAAIHAAAALRKA 193
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A2D5W5K6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5K6_9BACT) HSP 1 Score: 136 bits (342), Expect = 3.460e-37 Identity = 75/162 (46.30%), Postives = 107/162 (66.05%), Query Frame = 1
Query: 7 RAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAA 492
RAGTALR+ + +LV S+LV+E RVL A A G +ET Y + DR WG + G R +R+PGGVLPDG G++L+G+ RL GE+ +L L++ G LR+PVGLAQGR+ + LDG+R + R G L LV+ ++G ++ AD + DYA+ + +EAA
Sbjct: 31 RAGTALRLDIEELVERSDLVLEGRVLSATPVMGASGRLETDYLMTVDRTLWGQ-HEG-TRVLRLPGGVLPDGSGLMLAGMPRLAAGEELVLMLTEAGRGELRVPVGLAQGRFTLHHGLDGTRTLVREQGSLQLVDQSSGRVQSADSRSILDYAETMGRIEAA 190
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A7C8D2K6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D2K6_9BACT) HSP 1 Score: 130 bits (328), Expect = 3.750e-35 Identity = 79/172 (45.93%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 1 EVRAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREASG 516
+V AGTA+R+ + LV+ S+LV E RV R + A G +ET + + +R FWG R R+PGGVLPDGRG++L G+ L VGEDA+LFLS EG RMPVGL QG+ V T L G R ++R L +A +G LE DYA+ VAE+ AA A R G
Sbjct: 26 DVAAGTAVRLDIDQLVSESDLVFEGRVRSMRTIQPAPGRLETEFEVVVERTFWGSDEP--TRSFRLPGGVLPDGRGLMLPGMPSLLVGEDAILFLSSEGASGARMPVGLGQGKLGVLTTLQGQRSLSRQHSQLTFADAKSGNLEHQGFEQRFDYAETVAEIWAAAARRSREG 195
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A2E5X6X8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X6X8_9BACT) HSP 1 Score: 129 bits (325), Expect = 1.560e-34 Identity = 78/169 (46.15%), Postives = 103/169 (60.95%), Query Frame = 1
Query: 7 RAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREAS 513
RAGTALR+ + LV S+L++E RVL A G ET Y L +R WG + G R +R+PGG+ PDG G++L G+ RL GED +L LS+ G LR+PVGLAQGR+ T LDG+R + R G L L++ TG AD V DYA+ +A +EAA R A+
Sbjct: 31 RAGTALRLDLEQLVERSDLIIEGRVLSALPVLGESGRPETDYLLTVERTLWGE-HEG-TRILRLPGGLRPDGSGLVLPGMPRLSSGEDLVLLLSEAGRGGLRVPVGLAQGRFTRHTSLDGTRTLERDQGQLSLLDPRTGRTRPADARSVLDYAETMARIEAAANQRRAA 197
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A800KMA8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800KMA8_9BACT) HSP 1 Score: 129 bits (324), Expect = 2.090e-34 Identity = 78/170 (45.88%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 1 EVRAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREA 510
++ AGTALRM + LV GS+LV+EARVL GL+ T + L R FWG R VR+PGG L GR L+ G+ L VGE+ALL LS EGP+ +R+ GL+QGRYR+ T L GSRV +R L++A TG L V +YAD +A AAV+ + A
Sbjct: 32 DLNAGTALRMDMEQLVEGSDLVLEARVLSQTPLLGTDGLVYTDFELEVQRTFWGEDRPS--RRVRLPGGALSTGRATLIPGMGTLRVGEEALLMLSPEGPQGVRVFCGLSQGRYRILTPLTGSRVASREASAEALLDATTGMLVPGTQSEVLEYADLIARCTAAVSAKRA 199
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A518EXY5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EXY5_9BACT) HSP 1 Score: 128 bits (322), Expect = 5.440e-34 Identity = 72/168 (42.86%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 7 RAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREA 510
+AGTALRM + + + S+LV+E V+ + E A G I T +T+ +R FWGP + R +RIPGGVL +G+G ++ G+ RL +GE+ +LFL++ +R+PVGL+QG+YR+ T DGSR+ ++G + L++A T DG + DYAD VA +EAA R A
Sbjct: 31 QAGTALRMDLDEAFSRSDLVLEGTVVNGMSGETAKGEIYTDWTIDVERTFWGP--SEPQRTIRIPGGVLANGKGTMIPGMPRLALGEEVVLFLTEPSSEGIRVPVGLSQGKYRIVTGSDGSRMAVQTGDHVTLISART--TRSIDGFEMLDYADLVARIEAASQKRVA 194
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A7C2BCV1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2BCV1_9BACT) HSP 1 Score: 124 bits (312), Expect = 9.320e-33 Identity = 77/170 (45.29%), Postives = 107/170 (62.94%), Query Frame = 1
Query: 1 EVRAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREA 510
+V AGTA+RM + +L ++L++E RVL A A EV G IET Y + DR F G R VR+PGGVLPDGRG++L+G+ R+ GE+ LLFLS EGP +R+PVGLAQG+ + DGS+ + G+ LV+ G + + G DYA+ VA +EA +A + A
Sbjct: 26 DVEAGTAVRMDIAELTEHADLILEGRVLLANAFEV-DGRIETEYLIQVDRTFEGEDQP--YRTVRMPGGVLPDGRGLILAGMPRIVPGEEELLFLSAEGPTGVRVPVGLAQGKLSLVRNADGSKSLLSDMAGVVLVSE-DGSVSEGAGAMRVDYAEVVARIEATLAEKAA 191
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A2D6QCA3_9ARCH (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2D6QCA3_9ARCH) HSP 1 Score: 123 bits (308), Expect = 1.420e-31 Identity = 75/170 (44.12%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 1 EVRAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREA 510
++ AGTALRM + LV GS+LV+EARVL + + GL+ T + L R FWG R VR+PGG + GR L+ G+ L VGE+ALL LS +GP+ R+ GL+QG YR+ T L GSRV +R L++A TG L V +YAD +A AAV+ + A
Sbjct: 71 DLNAGTALRMDLEQLVEGSDLVLEARVLSEKPLLGSDGLVYTDFELEVQRTFWGEDRPS--RRVRLPGGAMSTGRVTLIPGMGTLRVGEEALLMLSPKGPQGARVFCGLSQGCYRILTPLTGSRVASREASAEALLDATTGTLVPGMQSEVLEYADLIARCTAAVSAKRA 238
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A2D5AYC9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AYC9_9BACT) HSP 1 Score: 110 bits (274), Expect = 4.210e-27 Identity = 66/165 (40.00%), Postives = 97/165 (58.79%), Query Frame = 1
Query: 4 VRAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVA 498
V AGTA+R+ V +L + L+VE RVL A+ E+ G L+ T Y + G A R V +PGGV DG GMLL+G+ + G+ +L FL++E LRMPVGLAQG++ + DG++ + R + L+N TG ++++ G V DYA E+EA +A
Sbjct: 26 VSAGTAIRLEVSELAYNASLIVEGRVLSAQTVEIEG-LVATEYLIEVGETLAGTDLA--YRAVCVPGGVREDGSGMLLAGMPMVLPGDTSLFFLTEESSNGLRMPVGLAQGKFDIVLLADGNKRLARDASDVTLINPQTGMVQNSGGRAVYDYAQVRTEIEAGLA 187
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Match: A0A521KQ75_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KQ75_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 2.020e-21 Identity = 71/169 (42.01%), Postives = 85/169 (50.30%), Query Frame = 1
Query: 4 VRAGTALRMSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGEVREVRIPGGVLPDGRGMLLSGVSRLEVGEDALLFLSDEGPRSLRMPVGLAQGRYRVETRLDGSRVVTRSGGGLGLVNAATGELEDADGLYVRDYADFVAEVEAAVAVREA 510
VRA T +RM LV G+EL+V+ARV ARA E G I T TL R + G + R VR+PGGVL DG G+LL+GV GE +LFLS G LR+PVGLAQG RV G L LV+ TG + Y E+E V R A
Sbjct: 27 VRASTVVRMDTAALVDGAELIVDARVRSARAIEQPGRRILTELTLDVGRTWLGEPL--QERVVRLPGGVLDDGSGLLLAGVPIPGPGERCVLFLSAAGADGLRLPVGLAQGCARVHVDAQGHAFAYTDTSSLALVDPRTGVASEGARGAPLSYERLAREIERGVKARAA 193 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78182.18381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78182.18381.1 >prot_M-pyrifera_M_contig78182.18381.1 ID=prot_M-pyrifera_M_contig78182.18381.1|Name=mRNA_M-pyrifera_M_contig78182.18381.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp MSVPDLVAGSELVVEARVLEARAEEVAGGLIETVYTLATDRVFWGPGYAGback to top mRNA from alignment at M-pyrifera_M_contig78182:432..956- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78182.18381.1 ID=mRNA_M-pyrifera_M_contig78182.18381.1|Name=mRNA_M-pyrifera_M_contig78182.18381.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig78182:432..956- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78182:432..956- >mRNA_M-pyrifera_M_contig78182.18381.1 ID=mRNA_M-pyrifera_M_contig78182.18381.1|Name=mRNA_M-pyrifera_M_contig78182.18381.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig78182:432..956- (Macrocystis pyrifera P11B4 male)back to top |