prot_M-pyrifera_M_contig779.18320.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig779.18320.1
Unique Nameprot_M-pyrifera_M_contig779.18320.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
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BLAST of mRNA_M-pyrifera_M_contig779.18320.1 vs. uniprot
Match: D7FUA9_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUA9_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.370e-16
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0 
Query:    6 VNPDGTPEEMPDMDEMARSYDAEKFMFKDGDFSEEELSKYA---------ASVMSADGDGAPGSGIDIDDADVRAAFGLD 76
             NPDGTP +MPDM+EMAR+Y+ E FMFK+GDFSEEELSKY           + ++ D D  PG  ID+DD   R+AFGLD
Sbjct:  517 TNPDGTPAKMPDMEEMARAYETEGFMFKEGDFSEEELSKYMDMXXXXXXXXAGLALDDD-LPGGDIDLDDPATRSAFGLD 595
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig779.18320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUA9_ECTSI2.370e-1656.25CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig779contigM-pyrifera_M_contig779:1200..3698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig779.18320.1mRNA_M-pyrifera_M_contig779.18320.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig779 1136..3793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig779.18320.1 ID=prot_M-pyrifera_M_contig779.18320.1|Name=mRNA_M-pyrifera_M_contig779.18320.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
MMQVGVNPDGTPEEMPDMDEMARSYDAEKFMFKDGDFSEEELSKYAASVM
SADGDGAPGSGIDIDDADVRAAFGLD*
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