Homology
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
D8LIJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ2_ECTSI)
HSP 1 Score: 156 bits (394), Expect = 1.740e-42
Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 1
Query: 1 SDGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
+DGRGYLARTYYAEIEYVLP AVMQPVW+SV+ DGSVDFGLSYHRAFYS DYDDYHD+Y+QRWRMEDLPW+VTCVNRIT
Sbjct: 1753 ADGRGYLARTYYAEIEYVLPGAVMQPVWSSVEHPDGSVDFGLSYHRAFYSPDYDDYHDIYIQRWRMEDLPWKVTCVNRIT 1832
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
A0A6H5JBJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ3_9PHAE)
HSP 1 Score: 149 bits (375), Expect = 6.350e-40
Identity = 70/88 (79.55%), Postives = 76/88 (86.36%), Query Frame = 1
Query: 1 SDGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQR--------WRMEDLPWQVTCVNRIT 240
+DGRGYLARTYYAEIEYVLP AVMQPVW+SV+ DGSVDFGLSYHRAFYS DYDDYHD+Y+QR WRMEDLPW+VTCVNRIT
Sbjct: 1821 ADGRGYLARTYYAEIEYVLPGAVMQPVWSSVEHPDGSVDFGLSYHRAFYSPDYDDYHDIYIQRYGEQSGSRWRMEDLPWKVTCVNRIT 1908
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
A0A835YHE6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHE6_9STRA)
HSP 1 Score: 134 bits (337), Expect = 8.530e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1 SDGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
+DG G LARTYY EYV+P VMQP+W SVK DGS DFGLSYHRAFY+ YDDYHD++LQRWRMED+PW + CVNRIT
Sbjct: 1719 ADGHGVLARTYYDTTEYVMPGPVMQPIWESVKAPDGSTDFGLSYHRAFYNSSYDDYHDIFLQRWRMEDVPWNIVCVNRIT 1798
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
A0A7S4DA20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA20_HETAK)
HSP 1 Score: 130 bits (327), Expect = 4.140e-34
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 7 GRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
GR YLARTYY ++EYVLPE +M P+W SVK +GSV FGL+YHRAFY +YD+YHD+YLQRWR ED PWQV CVNRIT
Sbjct: 167 GRAYLARTYYQDVEYVLPEPLMMPIWESVKDENGSVLFGLNYHRAFYEPEYDNYHDIYLQRWRKEDKPWQVICVNRIT 244
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
A0A7S2GBC0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBC0_9STRA)
HSP 1 Score: 131 bits (329), Expect = 1.010e-33
Identity = 56/85 (65.88%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 4 DGRGYLARTYYAEIEYVLPEAVMQPVWNSVKT------SDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
DGR +L RTYY ++EY+LPEAVMQP+W++VKT DG DF LSYHR FYS DYD+YHD+YLQRWR ED+PW+V CVNR+T
Sbjct: 650 DGRAFLGRTYYTDVEYILPEAVMQPLWSAVKTPTDDPLKDGETDFSLSYHRTFYSSDYDNYHDIYLQRWRDEDIPWKVKCVNRVT 734
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
A0A7S0CJZ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CJZ5_9STRA)
HSP 1 Score: 120 bits (301), Expect = 4.860e-33
Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 SDGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
SDG +L RTYYA +EY+LP +MQP+W SVK DG+ ++ L+YHRA Y YDDYHD+YLQRWR E PW+VTCVN IT
Sbjct: 24 SDGNAFLVRTYYATVEYILPSPIMQPMWESVKNDDGTTNYPLNYHRAHYEPGYDDYHDIYLQRWRTESKPWKVTCVNVIT 103
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
A0A7S4T1F0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T1F0_9STRA)
HSP 1 Score: 123 bits (309), Expect = 5.120e-32
Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 1
Query: 4 DGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
DG YL RTYYA IEYVLP VMQP+W SVK DG+ +F LS+HRA Y YDDYHD+YLQRWRMED PW++ CVN T
Sbjct: 60 DGAAYLIRTYYATIEYVLPSPVMQPIWESVKNVDGTTNFALSHHRAVYEPGYDDYHDIYLQRWRMEDKPWKIICVNHFT 138
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
B5YLR0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLR0_THAPS)
HSP 1 Score: 121 bits (304), Expect = 2.420e-30
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 4 DGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
DG YL +TYY +YV+PEAVMQP W SVK +DGS++F LSYHRA Y YDDY+D+YLQRWR ED PW+V CVNR+T
Sbjct: 1577 DGTAYLLKTYYDTTDYVVPEAVMQPTWESVKNADGSINFALSYHRAEYDPGYDDYYDIYLQRWRAEDKPWKVICVNRLT 1655
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
A0A7S2LHA4_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHA4_9STRA)
HSP 1 Score: 120 bits (302), Expect = 4.510e-30
Identity = 56/85 (65.88%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 4 DGRG------YLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
DG G YL RTYYA IEYVLP AVMQP+W SVK DGS FGL+YHRA Y YD+YHD+YLQRWR ED+PW+V CV+R T
Sbjct: 1562 DGEGRLNSTAYLVRTYYATIEYVLPAAVMQPMWESVKNIDGSTHFGLTYHRANYEPGYDNYHDIYLQRWRKEDIPWKVVCVDRST 1646
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Match:
K0SJH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJH8_THAOC)
HSP 1 Score: 115 bits (287), Expect = 4.770e-28
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 4 DGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYSKDYDDYHDVYLQRWRMEDLPWQVTCVNRIT 240
+G YL RT+Y +E+V+PE VMQP W SVK +DG+ + L+YHRA Y YDDYHD+++QRWR ED+PWQV CVNR+T
Sbjct: 1122 NGTAYLFRTFYDTVEFVVPEKVMQPTWESVKNADGTTNHPLTYHRAVYEPGYDDYHDIFIQRWRTEDMPWQVICVNRLT 1200
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7743.18232.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.74e-42 / Id = 87.50 Expect = 6.35e-40 / Id = 79.55 Expect = 8.53e-35 / Id = 71.25 Expect = 4.14e-34 / Id = 71.79 Expect = 1.01e-33 / Id = 65.88 Expect = 4.86e-33 / Id = 62.50 Expect = 5.12e-32 / Id = 67.09 Expect = 2.42e-30 / Id = 65.82 Expect = 4.51e-30 / Id = 65.88 Expect = 4.77e-28 / Id = 59.49 Sequence D8LIJ2_ECTSI A0A6H5JBJ3_9PHAE A0A835YHE6_9STRA A0A7S4DA20_HETAK A0A7S2GBC0_9STRA A0A7S0CJZ5_9STRA A0A7S4T1F0_9STRA B5YLR0_THAPS A0A7S2LHA4_9STRA K0SJH8_THAOC
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7743.18232.1
>prot_M-pyrifera_M_contig7743.18232.1 ID=prot_M-pyrifera_M_contig7743.18232.1|Name=mRNA_M-pyrifera_M_contig7743.18232.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp
SDGRGYLARTYYAEIEYVLPEAVMQPVWNSVKTSDGSVDFGLSYHRAFYS KDYDDYHDVYLQRWRMEDLPWQVTCVNRIT back to top mRNA from alignment at M-pyrifera_M_contig7743:579..1573+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7743.18232.1 ID=mRNA_M-pyrifera_M_contig7743.18232.1|Name=mRNA_M-pyrifera_M_contig7743.18232.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=995bp|location=Sequence derived from alignment at M-pyrifera_M_contig7743:579..1573+ (Macrocystis pyrifera P11B4 male)TCTGACGGCAGGGGATACCTGGCTCGCACATACTACGCCGAGATCGAGTA
CGTGTTGCCCGAGGCCGTCATGCAACCAGTTTGGAACTCCGTCAAGACCT
CCGATGGATCAGTGGACTTTGGGCTGAGCTATCACAGGGCCTTCTACTCC
AAAGACTACGACGATTACCACGATGTTTACTTGCAGAG GTAAGCGGAGGG
GGGGGTGTAACAGTTTTACTTTACCGGTACTGCCAGCCAGCCCGGCAGAA
AGAACTCCGCGTCGAAAAGTGTGCTAGTTTGTCGAGAGTGTCGAGACATT
TGTTGATAGTCAGCTAGTGAATGAACACAACGTATCGTAGGGCAAGGGTT
TCTTCTGCACGTGTGGAAGTCTATTCGAGCCTCGAGCCGAAGCCCCTTGC
AAGCGGCCGGATACACTGCAAATAGCCCGTGAGAGTCGTGGCGGATACCT
TAAAAGCATCCCACGTCCCCCATCCCCCCTCCCCCTTCCCACGTGCACCT
AAAAGCACCGACCGGCGAAGCATAAAGTATGTGTGGTTGTTGCCATTGCT
GTTGTTGTTTTTGTTGCTGCTGTTCCGGCATGAACTCATCGGCACAATCT
AGCCCGACACGCCAGGCTCCAAACATTCTTGCGGAGAGAAATAAAACAGA
CCACAGGGAAAAACTGGTGGTGAAAAGCGAACGCAAACCCGACGTCAGAG
AAGCGTGCAGAGCATCAGCCAAAGGAATTGATAGGTTCATCGTTCGTATC
AGATACGTTGTGTTCTATGTACGACCTTTGGAAACGCAAACGTGAACAAC
AATAAAATTGTAGAAGAAAATGAAAGAGAGTGCGTACGCAGTTCCTCATA
CCAACACAAAAACATCAACAACATATGCGAACCCTTTCCGCCGTGCCTGC
TTTATCGTCCCTCTTTTCCGTCGAACCCAAAATCATACACAAGATGGCGT
ATGGAGGACTTGCCTTGGCAAGTGACCTGCGTGAACCGCATAACG back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7743:579..1573+
>mRNA_M-pyrifera_M_contig7743.18232.1 ID=mRNA_M-pyrifera_M_contig7743.18232.1|Name=mRNA_M-pyrifera_M_contig7743.18232.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig7743:579..1573+ (Macrocystis pyrifera P11B4 male) TCTGACGGCAGGGGATACCTGGCTCGCACATACTACGCCGAGATCGAGTA CGTGTTGCCCGAGGCCGTCATGCAACCAGTTTGGAACTCCGTCAAGACCT CCGATGGATCAGTGGACTTTGGGCTGAGCTATCACAGGGCCTTCTACTCC AAAGACTACGACGATTACCACGATGTTTACTTGCAGAGTCTGACGGCAGG GGATACCTGGCTCGCACATACTACGCCGAGATCGAGTACGTGTTGCCCGA GGCCGTCATGCAACCAGTTTGGAACTCCGTCAAGACCTCCGATGGATCAG TGGACTTTGGGCTGAGCTATCACAGGGCCTTCTACTCCAAAGACTACGAC GATTACCACGATGTTTACTTGCAGAGATGGCGTATGGAGGACTTGCCTTG GCAAGTGACCTGCGTGAACCGCATAACGATGGCGTATGGAGGACTTGCCT TGGCAAGTGACCTGCGTGAACCGCATAACG back to top