Homology
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A662YGA1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGA1_9STRA)
HSP 1 Score: 116 bits (290), Expect = 4.800e-31
Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
G HLYQT PSG ++EYK AIG+RSQ+ RTYLE H F LG+D L+QHAL+ +RGC +Q LT N TI VVG DQPF+ I+G ++ P++ A+
Sbjct: 52 GVHLYQTCPSGNYYEYKGIAIGARSQSARTYLEKHFESFPNLGKDELIQHALQGMRGCLQGDQELTATNITIAVVGVDQPFKIIEGAELQPYIDAV 147
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
K3WEQ8_GLOUD (Proteasome subunit alpha type n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WEQ8_GLOUD)
HSP 1 Score: 117 bits (294), Expect = 1.150e-30
Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
G HLYQT PSG ++EYKA AIG+RSQ+ RTYLE H F LG+D L+QHAL+ +RGC +Q LT + TI +VG DQPF+ I+GD++ P++ A+
Sbjct: 141 GVHLYQTCPSGNYYEYKAIAIGARSQSARTYLEKHFESFVNLGKDELIQHALQGIRGCLQGDQELTAASITIAIVGVDQPFKIIEGDELQPYIDAV 236
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A8K1FH57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH57_PYTOL)
HSP 1 Score: 115 bits (289), Expect = 6.430e-30
Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
G HLY+T PSG +FEYKAHAIG+RSQ+ RTYLE H F+ L D L+ H+L+A+RGC +Q LT +N + +VG +QPF+ I+G D+ P++ A+
Sbjct: 141 GVHLYETCPSGNYFEYKAHAIGARSQSARTYLEKHFESFANLSADELIHHSLQAIRGCLQGDQELTSENVAVAIVGVNQPFKIIEGTDLQPYIDAV 236
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
H3G8I4_PHYRM (Proteasome subunit alpha type n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G8I4_PHYRM)
HSP 1 Score: 113 bits (282), Expect = 4.960e-29
Identity = 52/93 (55.91%), Postives = 66/93 (70.97%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFL 279
G HLYQT PSG ++EYK AIG+RSQ+ RTYLE H F LG+D L+ HAL+ +RGC +Q LT N TI VVG DQPF+ I+G ++ P+L
Sbjct: 141 GVHLYQTCPSGNYYEYKGIAIGARSQSARTYLEKHFESFPTLGKDELIHHALQGVRGCLQGDQELTASNVTIAVVGVDQPFKIIEGAELQPYL 233
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A6S9F1R3_9STRA (Proteasome subunit alpha type n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9F1R3_9STRA)
HSP 1 Score: 113 bits (282), Expect = 1.130e-28
Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
GPHLYQT PSG +EY A AIG+RSQ+GRTYLE H + RD L+ HALRAL GC + LT DN +I VVGKD+ F I+GD++ P+L L
Sbjct: 141 GPHLYQTCPSGNLYEYYASAIGARSQSGRTYLEKHYETLNDASRDDLIMHALRALTGCVSGDVELTKDNGSIAVVGKDEKFTLIEGDELQPYLDRL 236
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A7S2XQH4_9STRA (Proteasome subunit alpha type n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQH4_9STRA)
HSP 1 Score: 109 bits (273), Expect = 2.220e-27
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
GPHLYQT PSG +EY A AIG+RSQ+GRTYLE H F +D L+ HALRAL GC + LT DN +I VVGK + F I+GD++ P+L L
Sbjct: 142 GPHLYQTCPSGNIYEYYASAIGARSQSGRTYLEKHYESFEEASKDDLIMHALRALAGCVTGDGELTRDNGSIAVVGKGESFILIEGDELQPYLDRL 237
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A067BZB1_SAPPC (Proteasome subunit alpha type n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BZB1_SAPPC)
HSP 1 Score: 107 bits (268), Expect = 8.070e-27
Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
GPHL+QT PSG ++EY A AIG+RSQ+ RTYLE H F +D L++HAL+ +RGC + Q L+ N TI VVG DQ F I+G D+ P++ A+
Sbjct: 142 GPHLFQTCPSGNYYEYNAIAIGARSQSARTYLEKHFETFPNSSKDDLIKHALQGIRGCLEGSQELSASNVTIAVVGADQKFILIEGADLQPYIDAV 237
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A813CUP1_9DINO (PsmA1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CUP1_9DINO)
HSP 1 Score: 108 bits (269), Expect = 1.030e-26
Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
GPHLYQT+P+GEFFE+KA AIG+RSQ ++YLE H F + L+QH L+AL GCT++++ LT + TI VG F +DG VAPFL L
Sbjct: 142 GPHLYQTDPAGEFFEWKAMAIGARSQTAKSYLEKHFETFEDASLEELIQHGLKALNGCTEADKELTAASVTIAFVGAGTKFTLVDGVGVAPFLQTL 237
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A6G0W585_9STRA (Proteasome subunit alpha type n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W585_9STRA)
HSP 1 Score: 107 bits (267), Expect = 1.160e-26
Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
GPHL+QT PSG ++EY AIG+RSQ+ RTYLE H F LG+D L++HAL+ +RGC + Q L+ N I VVG + PF I+G D+ P++ A+
Sbjct: 142 GPHLFQTCPSGNYYEYHGIAIGARSQSARTYLEKHFESFPPLGKDDLIKHALQGIRGCLEGNQELSSSNVAIAVVGANHPFTLIEGADLQPYIDAV 237
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Match:
A0A4D9CTI6_9STRA (Proteasome subunit alpha type n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTI6_9STRA)
HSP 1 Score: 107 bits (268), Expect = 1.210e-26
Identity = 50/96 (52.08%), Postives = 73/96 (76.04%), Query Frame = 1
Query: 1 GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQHALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAAL 288
GPHLYQT+PSG ++EY A AIGSR+Q+G+TYLE + +EF LG+D L++HAL+AL G T ++ L+ DN ++ VVGKD P + I+G+ + +L A+
Sbjct: 141 GPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSG-TAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAI 235
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77237.18201.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 25
0 1 Expect = 4.80e-31 / Id = 55.21 Expect = 1.15e-30 / Id = 55.21 Expect = 6.43e-30 / Id = 52.08 Expect = 4.96e-29 / Id = 55.91 Expect = 1.13e-28 / Id = 56.25 Expect = 2.22e-27 / Id = 55.21 Expect = 8.07e-27 / Id = 51.04 Expect = 1.03e-26 / Id = 52.08 Expect = 1.16e-26 / Id = 50.00 Expect = 1.21e-26 / Id = 52.08 Sequence A0A662YGA1_9STRA K3WEQ8_GLOUD A0A8K1FH57_PYTOL H3G8I4_PHYRM A0A6S9F1R3_9STRA A0A7S2XQH4_9STRA A0A067BZB1_SAPPC A0A813CUP1_9DINO A0A6G0W585_9STRA A0A4D9CTI6_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 120.2
Seed ortholog evalue 5.5e-25
Seed eggNOG ortholog 115417.EPrPW00000016062
Preferred name PSMA1
KEGG ko ko:K02725,ko:K13141
KEGG Pathway ko03050,map03050
KEGG Module M00337,M00340
Hectar predicted targeting category other localisation
GOs GO:0000003,GO:0000502,GO:0001530,GO:0001673,GO:0001703,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005839,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0006997,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007290,GO:0007291,GO:0007346,GO:0007349,GO:0007369,GO:0007370,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009506,GO:0009653,GO:0009790,GO:0009896,GO:0009987,GO:0010004,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030054,GO:0030071,GO:0030154,GO:0030163,GO:0031331,GO:0031347,GO:0031348,GO:0031597,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0043073,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046685,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055044,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0071944,GO:0080134,GO:0090068,GO:0097159,GO:0097367,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
EggNOG free text desc. Proteasome subunit alpha type
EggNOG OGs 1MCPB@121069,COG0638@1,KOG0863@2759
Ec32 ortholog description Nucleophile aminohydrolases, N-terminal
Ec32 ortholog Ec-18_004030.1
EC 3.4.25.1
COG Functional cat. O
Best tax level Pythiales
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko03051,ko04147
Exons 1
Model size 294
Cds size 294
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816673.579961-CDS-M-pyrifera_M_contig77237:176..470 1622816673.579961-CDS-M-pyrifera_M_contig77237:176..470 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig77237 177..470 +
1692278111.6987927-CDS-M-pyrifera_M_contig77237:176..470 1692278111.6987927-CDS-M-pyrifera_M_contig77237:176..470 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig77237 177..470 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77237.18201.1
>prot_M-pyrifera_M_contig77237.18201.1 ID=prot_M-pyrifera_M_contig77237.18201.1|Name=mRNA_M-pyrifera_M_contig77237.18201.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
GPHLYQTEPSGEFFEYKAHAIGSRSQAGRTYLESHVSEFSGLGRDALVQH ALRALRGCTDSEQTLTVDNTTIGVVGKDQPFQRIDGDDVAPFLAALAE back to top mRNA from alignment at M-pyrifera_M_contig77237:177..470+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77237.18201.1 ID=mRNA_M-pyrifera_M_contig77237.18201.1|Name=mRNA_M-pyrifera_M_contig77237.18201.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig77237:177..470+ (Macrocystis pyrifera P11B4 male)GGTCCTCACTTGTACCAGACGGAGCCTAGCGGCGAGTTTTTCGAGTACAA
GGCGCATGCAATCGGGAGCCGGTCCCAGGCCGGTCGGACGTATTTGGAGA
GCCACGTGTCTGAGTTTTCCGGTCTGGGTCGGGATGCGTTGGTGCAACAC
GCGCTGCGGGCATTGCGGGGGTGCACCGACTCGGAGCAGACGCTGACGGT
GGACAACACCACCATTGGGGTGGTGGGCAAGGACCAGCCCTTCCAGAGAA
TCGACGGAGACGACGTGGCCCCATTCCTCGCAGCGCTTGCCGAA back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77237:177..470+
>mRNA_M-pyrifera_M_contig77237.18201.1 ID=mRNA_M-pyrifera_M_contig77237.18201.1|Name=mRNA_M-pyrifera_M_contig77237.18201.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig77237:177..470+ (Macrocystis pyrifera P11B4 male) GGTCCTCACTTGTACCAGACGGAGCCTAGCGGCGAGTTTTTCGAGTACAA GGCGCATGCAATCGGGAGCCGGTCCCAGGCCGGTCGGACGTATTTGGAGA GCCACGTGTCTGAGTTTTCCGGTCTGGGTCGGGATGCGTTGGTGCAACAC GCGCTGCGGGCATTGCGGGGGTGCACCGACTCGGAGCAGACGCTGACGGT GGACAACACCACCATTGGGGTGGTGGGCAAGGACCAGCCCTTCCAGAGAA TCGACGGAGACGACGTGGCCCCATTCCTCGCAGCGCTTGCCGAAGGTCCT CACTTGTACCAGACGGAGCCTAGCGGCGAGTTTTTCGAGTACAAGGCGCA TGCAATCGGGAGCCGGTCCCAGGCCGGTCGGACGTATTTGGAGAGCCACG TGTCTGAGTTTTCCGGTCTGGGTCGGGATGCGTTGGTGCAACACGCGCTG CGGGCATTGCGGGGGTGCACCGACTCGGAGCAGACGCTGACGGTGGACAA CACCACCATTGGGGTGGTGGGCAAGGACCAGCCCTTCCAGAGAATCGACG GAGACGACGTGGCCCCATTCCTCGCAGCGCTTGCCGAA back to top