prot_M-pyrifera_M_contig7691.18125.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7691.18125.1
Unique Nameprot_M-pyrifera_M_contig7691.18125.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length43
Homology
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: D8LJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJN8_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 3.260e-7
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    5 CSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTS 42
            C+PNPC N GSC +D  GG  C+C+S +GG+ C+TDT+
Sbjct:  383 CNPNPCLNEGSCEVDPNGGYSCSCSSSYGGMNCETDTT 420          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: UPI0013902961 (neurogenic locus notch homolog protein 1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013902961)

HSP 1 Score: 51.2 bits (121), Expect = 2.910e-6
Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    3 SACSPNPCQNGGSCAMDVG--GGSICTCTSGFGGLFCQTD 40
            S CSPNPC+NGG CA D+G   G  C C SGF G  CQ+D
Sbjct:  756 SPCSPNPCENGGKCADDLGQDSGYRCVCRSGFSGARCQSD 795          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: G3N5G0_GASAC (FAT atypical cadherin 3a n=9 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3N5G0_GASAC)

HSP 1 Score: 49.7 bits (117), Expect = 1.020e-5
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    1 DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTS 42
            +++AC PNPCQNGG+C   +G   +C+C  GF GL C+ D +
Sbjct: 4098 EITACIPNPCQNGGAC-RPIGNAFLCSCRRGFKGLICEEDVN 4138          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: A0A821E1S3_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A821E1S3_9BILA)

HSP 1 Score: 47.0 bits (110), Expect = 1.070e-5
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 0
Query:    5 CSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQ 38
            C PNPC+NGGSCA+  GGG  C C +GF G  C+
Sbjct:   12 CLPNPCRNGGSCAVVPGGGFRCICGAGFTGARCE 45          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: UPI000F4EA386 (inactive serine protease PAMR1 n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4EA386)

HSP 1 Score: 49.3 bits (116), Expect = 1.400e-5
Identity = 21/38 (55.26%), Postives = 25/38 (65.79%), Query Frame = 0
Query:    1 DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQ 38
            +LS CSPNPC NGG CA+D      C C +GF GL C+
Sbjct:  251 ELSVCSPNPCMNGGICALDTVQTFHCACQAGFTGLLCE 288          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: A0A7N8WJ68_9TELE (FAT atypical cadherin 3a n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8WJ68_9TELE)

HSP 1 Score: 48.1 bits (113), Expect = 3.580e-5
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTS 42
            +++AC PNPCQNGG C   +G   +C+C  GF GL C+ D +
Sbjct: 4062 EITACVPNPCQNGGMC-KPIGNAFLCSCRRGFKGLTCEEDVN 4102          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: A0A7N8XVU5_9TELE (FAT atypical cadherin 3a n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8XVU5_9TELE)

HSP 1 Score: 48.1 bits (113), Expect = 3.580e-5
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTS 42
            +++AC PNPCQNGG C   +G   +C+C  GF GL C+ D +
Sbjct: 4058 EITACVPNPCQNGGMC-KPIGNAFLCSCRRGFKGLTCEEDVN 4098          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: A0A7N8X7Q2_9TELE (FAT atypical cadherin 3a n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8X7Q2_9TELE)

HSP 1 Score: 48.1 bits (113), Expect = 3.580e-5
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTS 42
            +++AC PNPCQNGG C   +G   +C+C  GF GL C+ D +
Sbjct: 4042 EITACVPNPCQNGGMC-KPIGNAFLCSCRRGFKGLTCEEDVN 4082          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: A0A4W6CNF7_LATCA (FAT atypical cadherin 3a n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6CNF7_LATCA)

HSP 1 Score: 47.8 bits (112), Expect = 4.900e-5
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTS 42
            +++AC PNPCQNGG C   +G   +C+C  GF GL C+ D +
Sbjct: 4057 EITACVPNPCQNGGVC-KPIGNAFLCSCRRGFKGLTCEEDVN 4097          
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Match: A0A8D3CRY4_SCOMX (Uncharacterized protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3CRY4_SCOMX)

HSP 1 Score: 47.8 bits (112), Expect = 4.900e-5
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTS 42
            +++AC PNPCQNGG C   +G   +C+C  GF GL C+ D +
Sbjct: 4076 EITACVPNPCQNGGVC-KPIGNAFLCSCRRGFKGLTCEEDVN 4116          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7691.18125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LJN8_ECTSI3.260e-755.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00139029612.910e-660.00neurogenic locus notch homolog protein 1 n=1 Tax=N... [more]
G3N5G0_GASAC1.020e-547.62FAT atypical cadherin 3a n=9 Tax=Gasterosteus acul... [more]
A0A821E1S3_9BILA1.070e-558.82Hypothetical protein (Fragment) n=1 Tax=Rotaria ma... [more]
UPI000F4EA3861.400e-555.26inactive serine protease PAMR1 n=1 Tax=Tachysurus ... [more]
A0A7N8WJ68_9TELE3.580e-547.62FAT atypical cadherin 3a n=1 Tax=Mastacembelus arm... [more]
A0A7N8XVU5_9TELE3.580e-547.62FAT atypical cadherin 3a n=1 Tax=Mastacembelus arm... [more]
A0A7N8X7Q2_9TELE3.580e-547.62FAT atypical cadherin 3a n=1 Tax=Mastacembelus arm... [more]
A0A4W6CNF7_LATCA4.900e-547.62FAT atypical cadherin 3a n=1 Tax=Lates calcarifer ... [more]
A0A8D3CRY4_SCOMX4.900e-547.62Uncharacterized protein n=1 Tax=Scophthalmus maxim... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00010EGFBLOODcoord: 33..39
score: 32.61
coord: 1..12
score: 41.08
coord: 13..20
score: 40.0
coord: 22..32
score: 40.21
NoneNo IPR availableGENE3D2.10.25.10coord: 2..42
e-value: 4.2E-11
score: 44.7
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1..40
IPR000742EGF-like domainPFAMPF00008EGFcoord: 5..34
e-value: 7.0E-8
score: 32.6
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 1..38
score: 17.863
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 26..37
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 26..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7691contigM-pyrifera_M_contig7691:12451..12579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7691.18125.1mRNA_M-pyrifera_M_contig7691.18125.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7691 12451..12579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7691.18125.1 ID=prot_M-pyrifera_M_contig7691.18125.1|Name=mRNA_M-pyrifera_M_contig7691.18125.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=43bp
DLSACSPNPCQNGGSCAMDVGGGSICTCTSGFGGLFCQTDTSC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013032EGF-like_CS