mRNA_M-pyrifera_M_contig76746.18089.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76746.18089.1
Unique NamemRNA_M-pyrifera_M_contig76746.18089.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: A0A5A8EAZ7_CAFRO (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EAZ7_CAFRO)

HSP 1 Score: 227 bits (579), Expect = 1.800e-68
Identity = 126/266 (47.37%), Postives = 162/266 (60.90%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAAR-LGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEM-------GWGVKGRTVP-LRYPLLELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIA---EFPAM 762
            ++HNTHH+IPN+ E + D  DGDPDIDTLP LAWS   A+KA R   G   F V+ Q  + FP L  ARL W  QS  + L   +        WG  GR  P LRYP+ EL  L +HY    ++A+     I Q + +F  A  + G  + V+F+VGHNGM+    + +P FF+ Q+  TRNV DD IGF GWFTGGL  Q+EHHL+P++PRH L  A P V+ALCKKH + YHS  L  G+ EVL+CLD ++   I    EFPAM
Sbjct:  202 NKHNTHHSIPNLHESEDDXXDGDPDIDTLPFLAWSTTMADKARRDPSGWSAFFVRNQQMIFFPLLSFARLTWAQQSIAYALAPLLPETARGGAWG-GGRVAPSLRYPVAELVGLAAHYTVLLVLAYLYMTPI-QAIAYFLTAQMVCGLMLAVSFVVGHNGMECFDKADKPGFFELQLRATRNVTDDCIGFAGWFTGGLHLQVEHHLFPTMPRHHLAKAAPIVEALCKKHGVRYHSQPLLVGVWEVLECLDVMAQPVIRALHEFPAM 465          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: A0A6H5JB93_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB93_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 4.810e-65
Identity = 121/260 (46.54%), Postives = 161/260 (61.92%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMG---WGVKGRTVPLRYPL---LELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHHA+PN+ E   D HDGDPD+DT+PVLAWS   AE AA+   +  FL+ +Q+++ FP LL+AR++WV QSF +V     G   W  KG    +   L   LE P LL H +W + +A+  GF   + L  FAVA    G F+ + F +GHNGM    +  RP F+K QV TTRNV   P  F  WF GGL YQ++HHL+P +PRH+L      V++ CK+H++ YH  S+  G  EVL  L  VS +FIAEFPAM
Sbjct:  225 NKHNTHHAVPNLHESSADAHDGDPDMDTMPVLAWSIKMAE-AAKDTTVSRFLIGHQAFLYFPILLIARVSWVMQSFSFVFNGLPGAKLWTTKGADTFVPKSLASKLESPALLGHILWMSYLAFNLGF--VKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTP--FVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKQHDVHYHEASMWEGTKEVLSHLSDVSAEFIAEFPAM 479          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: A0A6G0WTQ2_9STRA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTQ2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.160e-65
Identity = 117/255 (45.88%), Postives = 159/255 (62.35%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDT-HDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMGWGVKGRTVPLRYPLLELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHHAIPN L  D D  + GDPDIDT+P+LAWS   A K    G    F VK Q+ + FP LL+AR++WV QS+++V     G G  G   PL+YPL+E   L+++Y+W   + +  G S  Q +    V+ A  G F+ + F +GHNGM +    ++P F+K QV TTRNV      F  WF GGL YQ++HHL+P +PRH LP     V++LCK++ +PYH T    GLVEV+  L ++S DFI EFPAM
Sbjct:  206 NKHNTHHAIPN-LHTDHDIGYLGDPDIDTMPILAWSFKMA-KTVESGSWGVFFVKNQAILYFPILLLARVSWVHQSYKYVF---QGVGPAGTYDPLKYPLVERAGLITYYLWNLALVYFSGMSFLQAISFIWVSQASCGLFLALVFSIGHNGMAVFDRDEKPDFWKLQVLTTRNVSGS--WFIDWFMGGLNYQVDHHLFPMVPRHHLPALNVLVKSLCKQYAVPYHETGFVDGLVEVVAKLKEISTDFIREFPAM 453          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: Q49S39_9STRA (Fatty acid desaturase n=1 Tax=Glossomastix chrysoplasta TaxID=172669 RepID=Q49S39_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.350e-64
Identity = 115/258 (44.57%), Postives = 157/258 (60.85%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMGWGVKGRTVPLRY---PLLELPLLLSHYVW-YALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHH++PN+ E   D  DGDPDIDT+P+LAWS   A+ A     +  + V +Q++  FP L +ARL+W++ SF +V    + W  K   V  +    PLLE   LL HY W +AL A  G  S+ + L  F VA    G  + + F +GHNGM +  ++ RP F+K QV TTRN+   P  F  WF GGL +Q+EHHL+PSLPRH+LP A   V A CK+  + YH   L TG  E+L CL +V+ +F+ EFPAM
Sbjct:  214 NKHNTHHSVPNLYESQPDAADGDPDIDTMPLLAWSLRMAKNAD--NALSRWFVSHQAFCYFPILGLARLSWLEGSFSFVFSNPLAWKTKNLDVAKQLVTNPLLEQAGLLVHYAWVFALCACTG--SLVRALAFFFVATCTSGLLLAIVFGLGHNGMALYEANARPDFWKLQVTTTRNITGSP--FVHWFCGGLQFQVEHHLFPSLPRHNLPRAHEIVTAFCKEQGVKYHEADLLTGTKEILSCLSEVTTEFLDEFPAM 465          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: A0A1S7C7Q7_9STRA (Delta-6 fatty acid desaturase n=2 Tax=Nannochloropsis TaxID=5748 RepID=A0A1S7C7Q7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 7.240e-63
Identity = 114/261 (43.68%), Postives = 163/261 (62.45%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMG---WGVKGRTVP---LRYPLLELPLLLSHYVWY-ALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHHA+PN++E   D  DGDPDIDT+P+LAWS   A++A +     PF V++QS + FP LL+AR++W+ QSF +V  +  G   W  KG T     ++   LE   L++HY+WY ALM      S+A+ L++F  +  + GF + + F +GHNGM +  +  RP F+K QV TTRNV    +    WF GGLGYQ++HHL+P +PRH L      V+  CK H + YH T++  G  EVL  L  V+ +F+A+FPAM
Sbjct:  219 NKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSW-GPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCH--MSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWL--VQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 474          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: A0A8K1C208_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C208_PYTOL)

HSP 1 Score: 210 bits (535), Expect = 5.190e-62
Identity = 104/254 (40.94%), Postives = 157/254 (61.81%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMGWGVKGRTVPLRYPLLELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHHA+PN+   +     GDPDIDT+P+LAWS+  A KA     + PF +++Q+W+ FP LL AR++W+ QS+ +V      +       P+ Y  LE+  LL HY W   + +    ++ + +  F ++ A  G  + + F +GHNGM++     +P F+K QV TTRN+   P  F  WFTGGL YQI+HHL+P LPRH+L    P +++LCK+ +IP+H T    G+ EV+  LD++S +FI +FPAM
Sbjct:  210 NKHNTHHAVPNLHGNNGVMFSGDPDIDTMPLLAWSKEMAAKAID-SSIGPFFIRHQAWLYFPLLLFARISWLLQSYLYVFRGFAFYVYD----PVEYKTLEMIGLLMHYAWNIALPYYSNMTVLEGIAFFLMSQASCGLQLALVFSLGHNGMEVYERETKPDFWKLQVTTTRNIT--PSLFMDWFTGGLNYQIDHHLFPMLPRHNLHKVNPLIKSLCKEFDIPFHETGFWQGIFEVVGHLDQISKEFIVDFPAM 456          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: A0A4D9CU91_9STRA (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU91_9STRA)

HSP 1 Score: 208 bits (530), Expect = 4.480e-61
Identity = 109/261 (41.76%), Postives = 163/261 (62.45%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVL----GAEMGWGVKGRTVP---LRYPLLELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHHA+PN++E   D  DGDPDIDT+P+LAWS   A++A       PF +++Q+++ FP LL+AR++W+ QSF +V     GA + W  KG T     ++   LE   LL +Y+WY  + +    S+ + L++F  +  + GF + + F +GHNGM +  +  RP F+K QV TTRNV    +    WF GGLGYQ++HHL+P +PRH L      V++ CK+H + YH TS+  G +EVL  L  V+ +F+ +FPAM
Sbjct:  220 NKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSW-GPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASL-WATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCN-MSLPRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWL--IQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTLEVLAHLASVTKEFVTDFPAM 475          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: A0A485K3H7_9STRA (Aste57867_329 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K3H7_9STRA)

HSP 1 Score: 207 bits (527), Expect = 7.470e-61
Identity = 113/254 (44.49%), Postives = 153/254 (60.24%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMGWGVKGRTVPLRYPLLELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHHAIPN+       + GDPDIDT+P+LAWS   A K    G    F +K Q+ + FP LL+AR++WV QSFR+   A    G  G   PLR+PLLE   L ++Y W   + +  G S  Q +    V+ A  G F+ + F +GHNGM +     +P F+K QV TTRN+    +    WF GGL YQ++HHL+P +PRH+L      V++LCK++ +PYH TS   GL EV+  L +VS DFI EFPAM
Sbjct:  206 NKHNTHHAIPNLHTNTAVGYLGDPDIDTMPILAWSLKMA-KTVESGTWGVFFIKNQALLYFPILLLARVSWVHQSFRY---AFYNVGPAGTFDPLRHPLLERIGLSTYYAWNLALVYFSGMSFLQAVSFLWVSQASCGLFLALVFSIGHNGMAVFDRDDKPDFWKLQVLTTRNITGSWL--VDWFCGGLNYQVDHHLFPLVPRHNLAALNQLVKSLCKQYAVPYHETSFWVGLGEVVGHLKEVSTDFIREFPAM 453          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: S4WTU6_9STRA (Delta-6 desaturase n=1 Tax=Pythium aphanidermatum TaxID=65070 RepID=S4WTU6_9STRA)

HSP 1 Score: 207 bits (527), Expect = 8.220e-61
Identity = 107/254 (42.13%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMGWGVKGRTVPLRYPLLELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HNTHHA+PN+  R  +   GDPDIDT+P+LAWS+  A KA     + PF++K+Q+   FP LL ARL+W+ QS+ +V  +   +       P+  P LE   LL HY W   + +  G S+ + +  F +A A  G  + + F +GHNGM +     +P F+K QV TTRNV      F  WFTGGL YQI+HHL+P +PRH+L      +++LCK+ +IP+H T    G+ EV+  L  +S +FIA+FPAM
Sbjct:  211 NKHNTHHAVPNLHGRQGEGFSGDPDIDTMPLLAWSKEMAAKALD-SSIGPFMIKHQALFYFPLLLFARLSWLLQSYMYVFKSFAFYQYD----PVELPTLEKYGLLLHYAWQIALPYFAGMSLFEGVAFFLMAQATCGLLLALVFSIGHNGMSVYERESKPDFWKLQVTTTRNVKSSL--FMDWFTGGLNYQIDHHLFPMIPRHNLHKINVLIKSLCKEFDIPFHETGFWEGIYEVVDHLGHISKEFIADFPAM 457          
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Match: H3GA95_PHYRM (Cytochrome b5 heme-binding domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GA95_PHYRM)

HSP 1 Score: 206 bits (525), Expect = 1.590e-60
Identity = 110/254 (43.31%), Postives = 158/254 (62.20%), Query Frame = 1
Query:    1 SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVPFLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMGWGVKGRTVPLRYPLLELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHNGMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPSLPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAEFPAM 762
            ++HN HHA+PN++   +  + GDPDIDT+P+LAWS++ A KA       PF + +Q+ M FP LL AR +W+ QS+ +V     G+   G+  P+  P  E   L+ HY+W  L+    G S+AQ L  F VA    G  + + F VGHNGM +    ++P F++ QV TTRN+   P  F  WF GGL YQIEHHL+P +PRH+L    P V++LCK++++ +H T   TGLVEV+  L ++S +F+ EFPAM
Sbjct:  210 NKHNFHHAVPNLIGDAKTKYLGDPDIDTMPLLAWSKHMASKAYE-SSWGPFFISHQAVMYFPLLLFARFSWLLQSYYYVF---KGFAF-GQYDPVDLPNGEKFGLIVHYIWNVLLPVFTGMSVAQGLAFFMVAQMSCGGLLAMVFSVGHNGMSVYEREEKPDFWQLQVTTTRNIT--PGFFMDWFCGGLNYQIEHHLFPMMPRHNLQKVNPLVKSLCKQYDVRFHETGFYTGLVEVVDELAEISKEFLLEFPAM 456          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76746.18089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EAZ7_CAFRO1.800e-6847.37Cytochrome b5 heme-binding domain-containing prote... [more]
A0A6H5JB93_9PHAE4.810e-6546.54Cytochrome b5 heme-binding domain-containing prote... [more]
A0A6G0WTQ2_9STRA7.160e-6545.88Cytochrome b5 heme-binding domain-containing prote... [more]
Q49S39_9STRA1.350e-6444.57Fatty acid desaturase n=1 Tax=Glossomastix chrysop... [more]
A0A1S7C7Q7_9STRA7.240e-6343.68Delta-6 fatty acid desaturase n=2 Tax=Nannochlorop... [more]
A0A8K1C208_PYTOL5.190e-6240.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9CU91_9STRA4.480e-6141.76Cytochrome b5 heme-binding domain-containing prote... [more]
A0A485K3H7_9STRA7.470e-6144.49Aste57867_329 protein n=1 Tax=Aphanomyces stellatu... [more]
S4WTU6_9STRA8.220e-6142.13Delta-6 desaturase n=1 Tax=Pythium aphanidermatum ... [more]
H3GA95_PHYRM1.590e-6043.31Cytochrome b5 heme-binding domain-containing prote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76746contigM-pyrifera_M_contig76746:182..946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.4
Seed ortholog evalue1.2e-55
Seed eggNOG ortholog2880.D8LQU3
KEGG koko:K21737
Hectar predicted targeting categoryother localisation
EggNOG free text desc.unsaturated fatty acid biosynthetic process
EggNOG OGsCOG3239@1,KOG4232@2759
EC1.14.19.38,1.14.19.47
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size765
Cds size765
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.091766-CDS-M-pyrifera_M_contig76746:181..9461622816667.091766-CDS-M-pyrifera_M_contig76746:181..946Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76746 182..946 -
1692278107.8704975-CDS-M-pyrifera_M_contig76746:181..9461692278107.8704975-CDS-M-pyrifera_M_contig76746:181..946Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76746 182..946 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76746.18089.1prot_M-pyrifera_M_contig76746.18089.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76746 182..946 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76746.18089.1

>prot_M-pyrifera_M_contig76746.18089.1 ID=prot_M-pyrifera_M_contig76746.18089.1|Name=mRNA_M-pyrifera_M_contig76746.18089.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp
SQHNTHHAIPNMLERDRDTHDGDPDIDTLPVLAWSRYFAEKAARLGGMVP
FLVKYQSWMMFPALLMARLAWVDQSFRWVLGAEMGWGVKGRTVPLRYPLL
ELPLLLSHYVWYALMAWQGGFSIAQFLVHFAVANALGGFFIGVAFIVGHN
GMDIVASSQRPAFFKWQVATTRNVDDDPIGFTGWFTGGLGYQIEHHLYPS
LPRHSLPLAKPFVQALCKKHNIPYHSTSLPTGLVEVLQCLDKVSLDFIAE
FPAM*
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mRNA from alignment at M-pyrifera_M_contig76746:182..946-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76746.18089.1 ID=mRNA_M-pyrifera_M_contig76746.18089.1|Name=mRNA_M-pyrifera_M_contig76746.18089.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=765bp|location=Sequence derived from alignment at M-pyrifera_M_contig76746:182..946- (Macrocystis pyrifera P11B4 male)
TCACAGCACAACACGCACCATGCGATTCCGAACATGTTGGAGCGTGATCG TGACACTCACGACGGCGATCCTGACATTGACACGCTGCCCGTGTTGGCTT GGAGCCGTTATTTCGCGGAAAAGGCGGCTCGCTTGGGGGGGATGGTGCCC TTTTTGGTCAAGTACCAGTCCTGGATGATGTTCCCTGCCTTGTTGATGGC TCGGTTGGCTTGGGTGGATCAGTCGTTTCGTTGGGTGCTAGGTGCAGAGA TGGGGTGGGGCGTGAAAGGGAGAACGGTGCCACTGCGATACCCTCTCCTG GAACTCCCTCTCCTCCTCTCGCACTACGTGTGGTATGCACTCATGGCGTG GCAAGGAGGGTTTTCTATCGCTCAGTTCCTCGTCCATTTCGCTGTGGCGA ACGCTCTGGGAGGGTTTTTCATCGGAGTTGCATTCATCGTGGGTCACAAT GGAATGGACATTGTAGCGTCTTCCCAACGACCAGCGTTTTTCAAATGGCA AGTCGCCACCACCAGAAACGTGGACGATGACCCAATTGGATTCACAGGAT GGTTCACTGGAGGACTTGGCTACCAAATCGAACACCACCTCTACCCTTCC CTCCCCCGCCACTCCCTCCCGCTCGCAAAACCGTTCGTCCAAGCACTCTG CAAAAAACACAACATCCCATACCACTCCACCTCCCTCCCCACAGGCCTCG TCGAAGTCCTCCAGTGCCTCGACAAGGTCTCGCTCGACTTTATCGCAGAA TTCCCTGCCATGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76746:182..946-

>mRNA_M-pyrifera_M_contig76746.18089.1 ID=mRNA_M-pyrifera_M_contig76746.18089.1|Name=mRNA_M-pyrifera_M_contig76746.18089.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig76746:182..946- (Macrocystis pyrifera P11B4 male)
TCACAGCACAACACGCACCATGCGATTCCGAACATGTTGGAGCGTGATCG
TGACACTCACGACGGCGATCCTGACATTGACACGCTGCCCGTGTTGGCTT
GGAGCCGTTATTTCGCGGAAAAGGCGGCTCGCTTGGGGGGGATGGTGCCC
TTTTTGGTCAAGTACCAGTCCTGGATGATGTTCCCTGCCTTGTTGATGGC
TCGGTTGGCTTGGGTGGATCAGTCGTTTCGTTGGGTGCTAGGTGCAGAGA
TGGGGTGGGGCGTGAAAGGGAGAACGGTGCCACTGCGATACCCTCTCCTG
GAACTCCCTCTCCTCCTCTCGCACTACGTGTGGTATGCACTCATGGCGTG
GCAAGGAGGGTTTTCTATCGCTCAGTTCCTCGTCCATTTCGCTGTGGCGA
ACGCTCTGGGAGGGTTTTTCATCGGAGTTGCATTCATCGTGGGTCACAAT
GGAATGGACATTGTAGCGTCTTCCCAACGACCAGCGTTTTTCAAATGGCA
AGTCGCCACCACCAGAAACGTGGACGATGACCCAATTGGATTCACAGGAT
GGTTCACTGGAGGACTTGGCTACCAAATCGAACACCACCTCTACCCTTCC
CTCCCCCGCCACTCCCTCCCGCTCGCAAAACCGTTCGTCCAAGCACTCTG
CAAAAAACACAACATCCCATACCACTCCACCTCCCTCCCCACAGGCCTCG
TCGAAGTCCTCCAGTGCCTCGACAAGGTCTCGCTCGACTTTATCGCAGAA
TTCCCTGCCATGTAATCACAGCACAACACGCACCATGCGATTCCGAACAT
GTTGGAGCGTGATCGTGACACTCACGACGGCGATCCTGACATTGACACGC
TGCCCGTGTTGGCTTGGAGCCGTTATTTCGCGGAAAAGGCGGCTCGCTTG
GGGGGGATGGTGCCCTTTTTGGTCAAGTACCAGTCCTGGATGATGTTCCC
TGCCTTGTTGATGGCTCGGTTGGCTTGGGTGGATCAGTCGTTTCGTTGGG
TGCTAGGTGCAGAGATGGGGTGGGGCGTGAAAGGGAGAACGGTGCCACTG
CGATACCCTCTCCTGGAACTCCCTCTCCTCCTCTCGCACTACGTGTGGTA
TGCACTCATGGCGTGGCAAGGAGGGTTTTCTATCGCTCAGTTCCTCGTCC
ATTTCGCTGTGGCGAACGCTCTGGGAGGGTTTTTCATCGGAGTTGCATTC
ATCGTGGGTCACAATGGAATGGACATTGTAGCGTCTTCCCAACGACCAGC
GTTTTTCAAATGGCAAGTCGCCACCACCAGAAACGTGGACGATGACCCAA
TTGGATTCACAGGATGGTTCACTGGAGGACTTGGCTACCAAATCGAACAC
CACCTCTACCCTTCCCTCCCCCGCCACTCCCTCCCGCTCGCAAAACCGTT
CGTCCAAGCACTCTGCAAAAAACACAACATCCCATACCACTCCACCTCCC
TCCCCACAGGCCTCGTCGAAGTCCTCCAGTGCCTCGACAAGGTCTCGCTC
GACTTTATCGCAGAATTCCCTGCCATGTAA
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