mRNA_M-pyrifera_M_contig76696.18074.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76696.18074.1
Unique NamemRNA_M-pyrifera_M_contig76696.18074.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: X0TUR7_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0TUR7_9ZZZZ)

HSP 1 Score: 133 bits (334), Expect = 4.440e-36
Identity = 59/110 (53.64%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLE--RTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQK 327
            LL D FE G  AP+GW +GA +PGV Y+W+K++A +G  SL  RKTA ++ PIAAW+RTL    TG  S L+V+  VKA + ++AV+D++FLD +GEWIKHEWA Y+G +
Sbjct:  123 LLSDGFETGRVAPDGWDRGARVPGVRYLWDKREAFEGKASLCLRKTAKKFLPIAAWNRTLPLPHTGASSALRVSVQVKAVKVSRAVVDLLFLDASGEWIKHEWAVYVGAR 232          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A3D3R3C9_9PLAN (Abhydrolase_2 domain-containing protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A3D3R3C9_9PLAN)

HSP 1 Score: 128 bits (322), Expect = 3.580e-33
Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 1
Query:    1 SLLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQKE 330
            ++L DSFE G KAPE W  G  +PGV YV++K +   GDRSL  +K+A RYFPIA W R L   G+K  LQV   V+A++A+KA+IDV+FLDEN + + H+W +YIG KE
Sbjct:   30 AILKDSFETGTKAPEEWQTGLNVPGVRYVYDKGRGKSGDRSLSLQKSARRYFPIAQWYRLLPYQGEKQNLQVQCEVRAEQASKAIIDVLFLDENKKSLGHQWLSYIGAKE 139          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A355GB80_9PLAN (Abhydrolase_2 domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GB80_9PLAN)

HSP 1 Score: 128 bits (321), Expect = 5.000e-33
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQKE 330
            LL DSFE G  APEGW  G  +PGV YV++K +   GDRSL  +K+A RYFPIA W R L   G+K  LQV   V+A++ATKA+IDV FLDEN + + H+W +YIG K+
Sbjct:   31 LLKDSFETGTTAPEGWQSGFDVPGVRYVYDKGRGKTGDRSLSLQKSARRYFPIAQWYRLLPYQGEKQNLQVQCEVRAEQATKAIIDVQFLDENKKSLGHQWLSYIGAKQ 139          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A517X3M4_9PLAN (Carboxylesterase 2 n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X3M4_9PLAN)

HSP 1 Score: 127 bits (319), Expect = 1.010e-32
Identity = 59/108 (54.63%), Postives = 78/108 (72.22%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQK 327
            LL DSFEEG  AP+GW +GA + GV YV++K +   G RSL  +K+A RYFPIA W R L  +G  + L+V+  V+A++ATKA++DV FLDENG  I H+WA+YIG K
Sbjct:   30 LLDDSFEEGKTAPDGWQRGAKISGVRYVYDKGRGKTGKRSLSLQKSARRYFPIAQWYRILPYSGKHTSLKVSGQVRAQQATKAILDVQFLDENGNQIGHKWASYIGAK 137          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A517R836_9PLAN (Phospholipase/Carboxylesterase n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R836_9PLAN)

HSP 1 Score: 126 bits (317), Expect = 1.850e-32
Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQKE 330
            LL DSFEEG   P GW+ GA LPGV YV++K +   G RSL  +KTA RYFPIA W R L   G+   LQV   V+A++ATKA+IDV FLD N   + HEW +YIG K+
Sbjct:   30 LLKDSFEEGKTTPNGWNSGANLPGVRYVYDKGRGKTGKRSLSLQKTARRYFPIAQWYRILPYNGESKTLQVKCQVRAQQATKAIIDVQFLDANRSSLGHEWVSYIGAKQ 138          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A142X6A9_9PLAN (Carboxylesterase 2 n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142X6A9_9PLAN)

HSP 1 Score: 125 bits (314), Expect = 7.230e-32
Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQKERT 336
            L+ +SFE G K P+GW +G  +PGV YV+++K AS G+RSL  +K+  RYFP+ +WSRT      +  LQV   VKA +ATKAV+DV F     E ++HEWA Y+GQK+ T
Sbjct:   37 LVEESFEAGMKTPDGWQEGPAVPGVKYVYDQKTASKGERSLSLQKSEKRYFPVGSWSRTFPHKSQRRALQVAVQVKAAKATKAVVDVQFFGAGDELLQHEWAIYVGQKKPT 147          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: UPI0012F93BC0 (hypothetical protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI0012F93BC0)

HSP 1 Score: 124 bits (312), Expect = 1.210e-31
Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQKE 330
            L+ DSFE G K P+GW +   +  V YV++K   S+G RSLG +K  NRYFPIA WS++      +S L +TA VKA + TKAVIDV++ D+ G+ + HEWA YIGQKE
Sbjct:   32 LVEDSFESGTKEPDGWQRDGDVSSVRYVYDKSAGSEGSRSLGLQKAENRYFPIAGWSKSFTHNRAESTLALTAKVKAAKVTKAVIDVLYFDQAGKPLSHEWAVYIGQKE 140          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A5K7XJW3_9BACT (Uncharacterized protein n=1 Tax=Lacipirellula parvula TaxID=2650471 RepID=A0A5K7XJW3_9BACT)

HSP 1 Score: 124 bits (312), Expect = 1.420e-31
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQKE 330
            LL +SFE G K+P GW +GA +PGV Y+W   QAS G RSLG RKT NRYFPIA W RT+   G  + L+V   VKA +A KA++DV F  +  E I ++W AY+G KE
Sbjct:   37 LLKESFESGKKSPTGWREGANVPGVEYIWADAQASHGKRSLGLRKTENRYFPIAQWIRTVPHVGGAANLEVCLKVKAMQAQKAIVDVQFYADGDEMIGNQWLAYLGAKE 145          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A532UI66_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium B3_Pla TaxID=2012488 RepID=A0A532UI66_9BACT)

HSP 1 Score: 122 bits (305), Expect = 1.230e-30
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQK 327
            LL   FEEG K P  WS+G  + GV YVW+K        SL   KT  RYFPIA W + +ER G    L+++A VKAK+ TKA++DV FLD  G+WI H+WA+YIG+K
Sbjct:   27 LLNPGFEEGGKFPMHWSEGGKIDGVDYVWDKGNGYKSKASLCLYKTVKRYFPIAQWYQIVERDGSSPALEISAQVKAKQVTKAIVDVAFLDGTGKWISHKWASYIGRK 134          
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Match: A0A517ZZ87_9PLAN (Phospholipase/Carboxylesterase n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517ZZ87_9PLAN)

HSP 1 Score: 120 bits (300), Expect = 5.370e-30
Identity = 57/109 (52.29%), Postives = 72/109 (66.06%), Query Frame = 1
Query:    4 LLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANRYFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKHEWAAYIGQKE 330
            LL +SFE G  APE W QGA LPGV YV++K     G  SL  +K+A RYFPIA W R L   G    L+++  VKA++ATKA+IDV FLD+N +   H+WA YIG K+
Sbjct:   30 LLEESFETGTTAPENWKQGARLPGVRYVYDKGHGKTGKHSLSLQKSAKRYFPIAQWYRLLPCDGKAQTLEISCQVKAEQATKAIIDVQFLDQNQKLQGHQWACYIGAKQ 138          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76696.18074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
X0TUR7_9ZZZZ4.440e-3653.64Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A3D3R3C9_9PLAN3.580e-3353.64Abhydrolase_2 domain-containing protein n=7 Tax=Gi... [more]
A0A355GB80_9PLAN5.000e-3355.05Abhydrolase_2 domain-containing protein n=2 Tax=Pl... [more]
A0A517X3M4_9PLAN1.010e-3254.63Carboxylesterase 2 n=2 Tax=Gimesia aquarii TaxID=2... [more]
A0A517R836_9PLAN1.850e-3255.05Phospholipase/Carboxylesterase n=1 Tax=Gimesia alb... [more]
A0A142X6A9_9PLAN7.230e-3249.55Carboxylesterase 2 n=1 Tax=Planctomyces sp. SH-PL1... [more]
UPI0012F93BC01.210e-3151.38hypothetical protein n=1 Tax=Schlesneria paludicol... [more]
A0A5K7XJW3_9BACT1.420e-3153.21Uncharacterized protein n=1 Tax=Lacipirellula parv... [more]
A0A532UI66_9BACT1.230e-3050.93Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A517ZZ87_9PLAN5.370e-3052.29Phospholipase/Carboxylesterase n=4 Tax=Gimesia pan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76696contigM-pyrifera_M_contig76696:3..338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score127.5
Seed ortholog evalue4e-27
Seed eggNOG ortholog344747.PM8797T_09014
KEGG rclassRC01008
KEGG koko:K03088,ko:K11333
KEGG ReactionR09053,R09060
KEGG Pathwayko00860,ko01110,map00860,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA-templated transcription, initiation
EggNOG OGs2IZH8@203682,COG1595@1,COG1595@2
EC1.3.7.14,1.3.7.15
COG Functional cat.K
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021
Exons1
Model size336
Cds size336
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816666.4299793-CDS-M-pyrifera_M_contig76696:2..3381622816666.4299793-CDS-M-pyrifera_M_contig76696:2..338Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76696 3..338 -
1692278107.537661-CDS-M-pyrifera_M_contig76696:2..3381692278107.537661-CDS-M-pyrifera_M_contig76696:2..338Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76696 3..338 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76696.18074.1prot_M-pyrifera_M_contig76696.18074.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76696 3..338 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76696.18074.1

>prot_M-pyrifera_M_contig76696.18074.1 ID=prot_M-pyrifera_M_contig76696.18074.1|Name=mRNA_M-pyrifera_M_contig76696.18074.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
SLLVDSFEEGAKAPEGWSQGAPLPGVTYVWEKKQASDGDRSLGFRKTANR
YFPIAAWSRTLERTGDKSMLQVTANVKAKRATKAVIDVIFLDENGEWIKH
EWAAYIGQKERT
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mRNA from alignment at M-pyrifera_M_contig76696:3..338-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76696.18074.1 ID=mRNA_M-pyrifera_M_contig76696.18074.1|Name=mRNA_M-pyrifera_M_contig76696.18074.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig76696:3..338- (Macrocystis pyrifera P11B4 male)
TCCCTTTTGGTCGACAGCTTTGAGGAGGGGGCCAAAGCTCCGGAGGGTTG GAGTCAGGGTGCTCCGCTTCCAGGGGTAACGTACGTCTGGGAGAAGAAGC AGGCGTCAGATGGCGATCGGAGTTTGGGGTTTCGGAAGACCGCGAATCGC TATTTCCCCATCGCGGCATGGTCGCGAACACTTGAGCGAACCGGGGACAA ATCGATGCTCCAAGTGACAGCGAATGTCAAAGCGAAAAGAGCGACCAAGG CAGTCATTGACGTGATCTTTCTGGACGAGAATGGAGAGTGGATCAAACAC GAATGGGCCGCCTACATCGGCCAGAAGGAGCGGACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76696:3..338-

>mRNA_M-pyrifera_M_contig76696.18074.1 ID=mRNA_M-pyrifera_M_contig76696.18074.1|Name=mRNA_M-pyrifera_M_contig76696.18074.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig76696:3..338- (Macrocystis pyrifera P11B4 male)
TCCCTTTTGGTCGACAGCTTTGAGGAGGGGGCCAAAGCTCCGGAGGGTTG
GAGTCAGGGTGCTCCGCTTCCAGGGGTAACGTACGTCTGGGAGAAGAAGC
AGGCGTCAGATGGCGATCGGAGTTTGGGGTTTCGGAAGACCGCGAATCGC
TATTTCCCCATCGCGGCATGGTCGCGAACACTTGAGCGAACCGGGGACAA
ATCGATGCTCCAAGTGACAGCGAATGTCAAAGCGAAAAGAGCGACCAAGG
CAGTCATTGACGTGATCTTTCTGGACGAGAATGGAGAGTGGATCAAACAC
GAATGGGCCGCCTACATCGGCCAGAAGGAGCGGACTTCCCTTTTGGTCGA
CAGCTTTGAGGAGGGGGCCAAAGCTCCGGAGGGTTGGAGTCAGGGTGCTC
CGCTTCCAGGGGTAACGTACGTCTGGGAGAAGAAGCAGGCGTCAGATGGC
GATCGGAGTTTGGGGTTTCGGAAGACCGCGAATCGCTATTTCCCCATCGC
GGCATGGTCGCGAACACTTGAGCGAACCGGGGACAAATCGATGCTCCAAG
TGACAGCGAATGTCAAAGCGAAAAGAGCGACCAAGGCAGTCATTGACGTG
ATCTTTCTGGACGAGAATGGAGAGTGGATCAAACACGAATGGGCCGCCTA
CATCGGCCAGAAGGAGCGGACT
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