mRNA_M-pyrifera_M_contig76607.18052.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76607.18052.1
Unique NamemRNA_M-pyrifera_M_contig76607.18052.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A7Y2GK44_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GK44_9ACTN)

HSP 1 Score: 497 bits (1280), Expect = 2.730e-173
Identity = 262/306 (85.62%), Postives = 280/306 (91.50%), Query Frame = 1
Query:   91 AGDGFVIGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQVYDCVITLALAYAQAGSTDGDALIAAAIEVTND 1008
            AGDG VIGTVLPETG LAFLGPPQ EGAALAAADL AAGANV+VITGDSGTDGAVAQETV RLLGEGANAIVGAAASGVSQDIIQTL DA +PQCS SNTSPAFTGQENA YYFRTVPPDEAVSPIIADVV+ DG TNVA+VARADDYGNALAGLV  ELDGLG+AN T++YDPENVASD+VVG VA  GADAVVIIGFDE FPII+AALEAGV  DAMYGADG+F NTLN +IDE+NPNVIDG TLIGASGG DFNARLTE+T+GNLIYGGQ YDCVITLALA+AQAG+TDGDALIAA ++VTND
Sbjct:   75 AGDGLVIGTVLPETGGLAFLGPPQIEGAALAAADLAAAGANVTVITGDSGTDGAVAQETVGRLLGEGANAIVGAAASGVSQDIIQTLSDAAIPQCSASNTSPAFTGQENAGYYFRTVPPDEAVSPIIADVVSTDGRTNVALVARADDYGNALAGLVAAELDGLGIANGTISYDPENVASDSVVGDVAAQGADAVVIIGFDEAFPIIKAALEAGVAPDAMYGADGVFSNTLNASIDEANPNVIDGFTLIGASGGADFNARLTEITEGNLIYGGQAYDCVITLALAFAQAGTTDGDALIAAVLDVTND 380          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A6B0ZTE9_9ACTN (ABC transporter substrate-binding protein n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B0ZTE9_9ACTN)

HSP 1 Score: 332 bits (850), Expect = 2.460e-108
Identity = 177/305 (58.03%), Postives = 217/305 (71.15%), Query Frame = 1
Query:   88 AAGDGFVIGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQVYDCVITLALAYAQAGSTDGDALIAAAIEVT 1002
            A G   VIG V+PETG+LAFL  P  EG  LA  D+  AG NV ++TGD+ TD  VA E V RLLGEGA+ IVGAAASGVSQ  IQTLFDA++PQCS SNTSP+F+ Q+NA +YFRTVPPD+AVSPI+A +VA DGATNVAI ARADD+GNAL+GL+      LGVA   ++YD +  + DA V  + D GADAVV++ F E   II+  LEAG+P + MYG DGI+   L + +D SNPNV+DG   + A GG +F+ RL E T G++ YGGQ YDCV+ LALA   AGSTDG A+I     VT
Sbjct:   60 AGGSDLVIGQVMPETGSLAFLNSPMIEGIGLAMEDILGAGGNVQLLTGDTATDPDVAPEAVNRLLGEGAHVIVGAAASGVSQSFIQTLFDAQIPQCSPSNTSPSFSTQDNAGFYFRTVPPDQAVSPILAGIVAADGATNVAIPARADDWGNALSGLLATSFTELGVAYQIISYDEDATSYDATVAAIEDMGADAVVLVSFSEGAQIIRGMLEAGIPPEVMYGTDGIYDRNLADTVDPSNPNVLDGFVALTAGGGDEFSGRLIERTGGDVAYGGQAYDCVVVLALATLAAGSTDGPAIIGQVQAVT 364          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A6B1GXQ8_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1GXQ8_9ACTN)

HSP 1 Score: 325 bits (834), Expect = 2.920e-106
Identity = 176/300 (58.67%), Postives = 217/300 (72.33%), Query Frame = 1
Query:  106 VIGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQVYDCVITLALAYAQAGSTDGDALIAAAIEVTN 1005
            VIG+V+PETGALAFL  P      LA  D++AAG NV ++TGD+ TD  VA E V RLLGEGANAIVGAAASGVSQ  IQTL+D ++PQCS SNTSP+F+ QENA +YFRTVPPDEAVSP++A +VA DGATNVAI ARADD+G+ALA L+    D LGV+   ++YD +  + D  V  V   GADAVV++ F E   II+  LEAGVP  AMYG DGI+  +L E +D S+PNV+DG  ++ A G  DF+ARL E T GN+IYGGQ YDCV+ LALA   AG+  G A+I    +VT+
Sbjct:   41 VIGSVMPETGALAFLSAPMVVSIELAVKDIQAAGGNVRLLTGDTATDPDVAPEAVNRLLGEGANAIVGAAASGVSQSFIQTLYDTQIPQCSPSNTSPSFSTQENAGFYFRTVPPDEAVSPLVAKMVAVDGATNVAIPARADDWGSALANLLVDSFDNLGVSAQIISYDEDATSFDPTVAAVEAMGADAVVVVAFAEGAQIIRGLLEAGVPPTAMYGTDGIYDQSLAELVDASDPNVLDGFVVVAAGGSSDFSARLGEETGGNVIYGGQAYDCVVVLALAALAAGTNGGSAIIGQVQDVTS 340          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A6B1B0Q9_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B0Q9_9ACTN)

HSP 1 Score: 304 bits (778), Expect = 1.400e-97
Identity = 165/300 (55.00%), Postives = 210/300 (70.00%), Query Frame = 1
Query:  106 VIGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQVYDCVITLALAYAQAGSTDGDALIAAAIEVTN 1005
            VIG V+PETG+ AFL  P      LA  D+  AG NV ++TGDS TD  VA ETV RLL EGA+ IVGAA+SGVSQ  IQTL+DA++PQCS SNTSP+F+ Q+NA++YFRTVPPD+A + I++++VA DGATNVAI ARADD+GNALA L+    D LGV     +YD +  + D  V  +   GADAVV+I F E   II+  LEAG+P  AMYG+DGI+   L   +D +NPN +DG   + A G  +F+  L+ +TDGN+IYGGQ YDCVI LALA   AGSTDG A+I   + +T+
Sbjct:   58 VIGRVMPETGSAAFLNSPMIVSIDLALQDIRDAGGNVRMLTGDSATDPDVAPETVNRLLAEGAHVIVGAASSGVSQSFIQTLYDAQIPQCSPSNTSPSFSTQQNAAFYFRTVPPDQAAALILSNIVAADGATNVAIPARADDWGNALAELLADNFDELGVNYEIFSYDEDAASYDPTVSAIEAMGADAVVLITFSEGAQIIRGLLEAGIPPGAMYGSDGIYDLHLPTTVDPTNPNSLDGFVAVAAGGSDEFSTELSSMTDGNVIYGGQSYDCVIVLALAALAAGSTDGPAIIEQVLSLTS 357          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A7K2CSE9_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2CSE9_9ACTN)

HSP 1 Score: 301 bits (772), Expect = 2.380e-97
Identity = 164/292 (56.16%), Postives = 208/292 (71.23%), Query Frame = 1
Query:  106 VIGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQVYDCVITLALAYAQAGSTDGDALI 981
            V+G+V+PETG+LA  GP       LA  D+ AAG +V ++TGDS TD  VA ETV RLLGEGA+ IVGA+A+G SQ  IQTL+DA++PQC+ SNTS +F+ QENA+YYFRTVPP +A + I+A++VAG+GATNVA+ ARADD+GN+LA L+   LD LGVAN  + YD +  + DA V  V   GADAVV+I F E   II+  LE GVP  A+YG+DG +   LNE +D +NP V+DGL  I   GG+  N RL  LT GN++YG Q YDCV+ LALA A AGST G  +I
Sbjct:    8 VVGSVMPETGSLALFGPAMIVSIELAVQDIRAAGGDVRLLTGDSATDPDVAPETVNRLLGEGAHVIVGASAAGGSQSFIQTLYDAQIPQCAPSNTSTSFSTQENAAYYFRTVPPTQAAALILANMVAGEGATNVALPARADDWGNSLAELLAENLDNLGVANRILAYDEDATSFDATVAAVEAMGADAVVLISFTEGAQIIRGLLEVGVPPSAIYGSDGTYAPDLNEMVDPANPGVLDGLKAITVGGGKKHNLRLEPLTGGNVLYGAQAYDCVVVLALASAAAGSTAGPDII 299          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A6I4ZNC2_9CHLR (ABC transporter substrate-binding protein n=5 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZNC2_9CHLR)

HSP 1 Score: 292 bits (747), Expect = 3.900e-93
Identity = 169/305 (55.41%), Postives = 205/305 (67.21%), Query Frame = 1
Query:  109 IGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASG-GQD----FNARLTELTD--GNLIYGGQVYDCVITLALAYAQAGSTDGDALIAAAIEVT 1002
            IG VLPETGALA  G P      LA AD++  G  + VI  DSGTD   A E+V RLLGEGA+ IVGAAASG+SQ IIQTL+D K+PQCS SNTSP FTGQ NA YYFRT P D A +P+IAD V   G T V+IVARADDYG ALA L+   LD LG  + T+ YDP+    DA V  V+D G DA+V+I FDE   +I+  LEAG     MYG+DGI+   LN +++ES+P+V++G+TL  AS  G D    FN RL    +  GNL +G Q YDC + LALA  +AGSTDGD +IAA  +VT
Sbjct:   37 IGVVLPETGALAAYGGPMIVSVELAEADIKEGGGAIEVIYADSGTDPDKANESVNRLLGEGAHVIVGAAASGISQAIIQTLYDEKIPQCSPSNTSPNFTGQGNAGYYFRTAPSDAAAAPVIADTVVSRGGTRVSIVARADDYGQALAALLADRLDELGAESDTITYDPQAATFDAEVAGVSDYGPDAIVLIVFDEGVNLIRGLLEAGFDPSTMYGSDGIYRPDLNTSVNESDPDVLNGMTLFVASAPGSDAYDSFNIRLENALEQEGNLAFGAQSYDCTVILALAAKEAGSTDGDDIIAAVAKVT 341          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A6B0ZRD3_9ACTN (ABC transporter substrate-binding protein n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B0ZRD3_9ACTN)

HSP 1 Score: 279 bits (713), Expect = 5.280e-88
Identity = 155/299 (51.84%), Postives = 200/299 (66.89%), Query Frame = 1
Query:  106 VIGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQVYDCVITLALAYAQAGSTDGDALIAAAIEVT 1002
            VIG+V PE    +    P      LA  D+ AAG NV ++ GD GTD   A E V RLL EG +AI+GA +S  SQ  IQTL+DA++PQC+ SNTSP+F+ QENA+++FRTVPPDEAVSPI+A +VA DGAT+VAI AR DD+GNAL+ L+   L  LGV+   ++YDP   + D +V  V   GADAVV + F E   II+  LEAG+PA AMYG DGI+ + L E +  S+P V++G  ++ A G   FN R+T LTDGN+++GGQ YDCV+ L LA   A ST G A+IA    VT
Sbjct:   42 VIGSVWPEGDPESTSVSPVMASINLAVQDIRAAGGNVRLLRGDYGTDPDAAAEAVNRLLDEGVHAILGAGSSQASQSFIQTLYDAQIPQCAASNTSPSFSTQENAAFFFRTVPPDEAVSPIVATLVAADGATHVAIPARDDDWGNALSNLLVESLGELGVSAEIISYDPNATSFDPIVAAVQSTGADAVVFVTFSEGAEIIRGLLEAGLPATAMYGTDGIYDHNLAEVVSPSSPEVLNGFLMVAAGGNPTFNGRITGLTDGNVVWGGQAYDCVVVLMLAALAADSTSGPAIIAEVPGVT 340          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A2P8E3N6_9ACTN (Amino acid/amide ABC transporter substrate-binding protein (HAAT family) n=1 Tax=Haloactinopolyspora alba TaxID=648780 RepID=A0A2P8E3N6_9ACTN)

HSP 1 Score: 275 bits (704), Expect = 3.120e-86
Identity = 158/295 (53.56%), Postives = 204/295 (69.15%), Query Frame = 1
Query:  109 IGTVLPETGALAFLGPPQTEGAALAAADLEAAG----ANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTT-VNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTE-LTD---GNLIYGGQVYDCVITLALAYAQAGSTD 966
            +G VLPE+G LAFLG P   GA +A  D+ AAG    ++V++ TGD   D A+AQ+  ARL+  G + ++GAAASG+SQ+IIQ L+D ++ QCS +NTSP+F+ QEN  +Y RTVPPD AV+PIIAD V  DGA NVA+VARADDYG ALA LV   +  LG +  T V+YDP      A V Q+  A  DAVVIIGF E   +I+  +EAGVPA+A+YG+DG+F  TL + ++  +P  I G+ +IGASGG++FN RL E L D   GNLIYGGQ YDC+I +AL    A STD
Sbjct:   67 LGYVLPESGPLAFLGAPMITGANMALEDINAAGGVLGSDVTLTTGDEAGDAALAQQAAARLINSGVDGVLGAAASGMSQEIIQLLYDNQIVQCSPANTSPSFSEQENNGFYHRTVPPDAAVAPIIADTVVADGAQNVAVVARADDYGVALADLVETNVQNLGGSVATRVDYDPNTSDFSAEVSQITGANPDAVVIIGFGEAATLIRQLIEAGVPANAIYGSDGLFGPTLTQDVNPDDPGFISGMKVIGASGGEEFNNRLNERLPDNEKGNLIYGGQAYDCMIIMALGAIAADSTD 361          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: UPI00069758A2 (ABC transporter substrate-binding protein n=1 Tax=Nitriliruptor alkaliphilus TaxID=427918 RepID=UPI00069758A2)

HSP 1 Score: 273 bits (698), Expect = 2.480e-85
Identity = 160/295 (54.24%), Postives = 199/295 (67.46%), Query Frame = 1
Query:  109 IGTVLPETGALAFLGPPQTEGAALAAADLEAAG----ANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVN-YDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELT----DGNLIYGGQVYDCVITLALAYAQAGSTD 966
            IG +LPE+G LAFLG PQT    +A  D+ AAG    ++V++ TGD   D AVA++T ARL+ +G +AIVGAAASG+SQ+ IQTLFD ++ QCSGSNTSPAFT Q+N ++YFRTVPPDEAV+PIIA+ V GDG T  A++ARADDYG AL  LV   L   GV    V  YD E    D++V QV  AGAD  V+IGFDE   +  + +EAG PA ++YG DG+F   L + +       I GL +IGA+GG DFN RL E       GN+IYGGQVYDCVI +ALA   A S D
Sbjct:   72 IGYILPESGPLAFLGAPQTTAVRMAVDDINAAGGVLGSDVTLATGDEAGDAAVARDTAARLVNDGVDAIVGAAASGMSQEFIQTLFDNQIVQCSGSNTSPAFTDQDNNAFYFRTVPPDEAVAPIIANTVIGDGFTAPAVLARADDYGVALMELVDAGLTEQGVEPVLVETYDTETDDFDSLVSQVTGAGADTAVVIGFDEAGALFGSLIEAGFPAGSLYGGDGVFGPALADTVGTD----ISGLKVIGAAGGADFNERLNEAMPDGEQGNVIYGGQVYDCVIVIALAAEAAQSAD 362          
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Match: A0A6B1H283_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1H283_9ACTN)

HSP 1 Score: 271 bits (692), Expect = 7.590e-85
Identity = 152/299 (50.84%), Postives = 197/299 (65.89%), Query Frame = 1
Query:  106 VIGTVLPETGALAFLGPPQTEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGAAASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVSPIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDPENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADGIFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQVYDCVITLALAYAQAGSTDGDALIAAAIEVT 1002
            VIG+V  E  + +    P      LA  D+  AG NV ++  D GTD   A E V RLL EG + I+GA +S  SQ  IQTL+DA++PQC+ SNTSP+F+ QENA+Y+FRTVPPDEAVSPI+A +VA DGA++VAI AR DD+GNAL+ L+   L  LGV+   V+YDP   + D VV  V   GADAVV + F E   II+  +EAG+PA AMYG DGI+   L + ++ SNP+V+DG  ++ A G   FN R++ LTDGN+++GGQ YDCV  L LA   A ST G A+IA    VT
Sbjct:   42 VIGSVWTEGDSESSSVSPVVASIDLAVQDIRDAGGNVRLLREDYGTDPDAASEAVNRLLAEGVHVILGAGSSQASQSFIQTLYDAQIPQCAASNTSPSFSTQENAAYFFRTVPPDEAVSPIVATLVAADGASHVAIPARDDDWGNALSNLLVESLGELGVSAEVVSYDPNATSFDPVVAAVQSTGADAVVFVTFSEGAEIIRGLVEAGMPATAMYGTDGIYDQNLAQVVNPSNPDVLDGFVMVAAGGNPAFNRRISGLTDGNVVWGGQAYDCVAVLMLAALAADSTSGSAIIAEVPGVT 340          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76607.18052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2GK44_9ACTN2.730e-17385.62ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6B0ZTE9_9ACTN2.460e-10858.03ABC transporter substrate-binding protein n=3 Tax=... [more]
A0A6B1GXQ8_9ACTN2.920e-10658.67ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6B1B0Q9_9ACTN1.400e-9755.00ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A7K2CSE9_9ACTN2.380e-9756.16ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6I4ZNC2_9CHLR3.900e-9355.41ABC transporter substrate-binding protein n=5 Tax=... [more]
A0A6B0ZRD3_9ACTN5.280e-8851.84ABC transporter substrate-binding protein n=4 Tax=... [more]
A0A2P8E3N6_9ACTN3.120e-8653.56Amino acid/amide ABC transporter substrate-binding... [more]
UPI00069758A22.480e-8554.24ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6B1H283_9ACTN7.590e-8550.84ABC transporter substrate-binding protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76607contigM-pyrifera_M_contig76607:2..1009 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score206.8
Seed ortholog evalue1.5e-50
Seed eggNOG ortholog1123251.ATWM01000002_gene409
Preferred namenatB
KEGG koko:K01999,ko:K11954
KEGG TC3.A.1.4,3.A.1.4.2,3.A.1.4.6
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237,M00322
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM Extracellular ligand-binding receptor
EggNOG OGs2GM00@201174,COG0683@1,COG0683@2
COG Functional cat.E
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000
Exons1
Model size1008
Cds size996
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816665.172715-UTR-M-pyrifera_M_contig76607:1..131622816665.172715-UTR-M-pyrifera_M_contig76607:1..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76607 2..13 +
1692278106.7838056-UTR-M-pyrifera_M_contig76607:1..131692278106.7838056-UTR-M-pyrifera_M_contig76607:1..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76607 2..13 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816665.1862416-CDS-M-pyrifera_M_contig76607:13..10091622816665.1862416-CDS-M-pyrifera_M_contig76607:13..1009Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76607 14..1009 +
1692278106.7986166-CDS-M-pyrifera_M_contig76607:13..10091692278106.7986166-CDS-M-pyrifera_M_contig76607:13..1009Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76607 14..1009 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76607.18052.1prot_M-pyrifera_M_contig76607.18052.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76607 14..1009 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76607.18052.1

>prot_M-pyrifera_M_contig76607.18052.1 ID=prot_M-pyrifera_M_contig76607.18052.1|Name=mRNA_M-pyrifera_M_contig76607.18052.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=332bp
MDDGDDMDDDADTGDDDMDDMDDEGAAGDGFVIGTVLPETGALAFLGPPQ
TEGAALAAADLEAAGANVSVITGDSGTDGAVAQETVARLLGEGANAIVGA
AASGVSQDIIQTLFDAKVPQCSGSNTSPAFTGQENASYYFRTVPPDEAVS
PIIADVVAGDGATNVAIVARADDYGNALAGLVGGELDGLGVANTTVNYDP
ENVASDAVVGQVADAGADAVVIIGFDETFPIIQAALEAGVPADAMYGADG
IFFNTLNEAIDESNPNVIDGLTLIGASGGQDFNARLTELTDGNLIYGGQV
YDCVITLALAYAQAGSTDGDALIAAAIEVTND
back to top

mRNA from alignment at M-pyrifera_M_contig76607:2..1009+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76607.18052.1 ID=mRNA_M-pyrifera_M_contig76607.18052.1|Name=mRNA_M-pyrifera_M_contig76607.18052.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig76607:2..1009+ (Macrocystis pyrifera P11B4 male)
GGTGACGACGACATGGATGATGGCGACGACATGGACGACGACGCCGACAC CGGTGACGACGACATGGACGACATGGACGACGAAGGCGCAGCTGGCGATG GCTTCGTCATCGGCACCGTCCTGCCCGAGACCGGCGCGCTCGCCTTCCTC GGCCCGCCCCAGACCGAGGGTGCTGCGCTCGCCGCCGCCGACCTCGAAGC GGCCGGCGCCAACGTCTCGGTGATCACCGGCGATTCCGGCACCGACGGTG CTGTCGCCCAGGAAACCGTGGCTCGACTGCTCGGCGAAGGCGCCAACGCC ATCGTCGGCGCTGCCGCGTCGGGTGTGTCGCAGGACATCATCCAGACGCT CTTCGACGCCAAGGTCCCGCAGTGCTCGGGCTCCAACACGTCCCCGGCCT TCACCGGCCAGGAGAACGCGTCCTACTACTTCCGTACCGTGCCGCCGGAC GAGGCCGTGTCGCCGATCATCGCCGACGTGGTCGCCGGTGACGGCGCCAC CAACGTGGCGATCGTCGCTCGTGCCGACGACTACGGCAACGCGCTGGCGG GCCTCGTCGGCGGTGAGCTCGACGGTCTCGGCGTCGCCAACACCACCGTG AACTACGACCCCGAGAACGTGGCCTCCGACGCAGTGGTCGGTCAGGTCGC CGACGCCGGTGCCGACGCAGTCGTGATCATCGGCTTCGACGAGACCTTCC CGATCATCCAGGCTGCTCTCGAAGCGGGTGTGCCCGCCGACGCCATGTAC GGCGCCGACGGCATCTTCTTCAACACGCTCAACGAGGCGATCGACGAGTC CAACCCCAACGTGATCGACGGGCTCACGCTCATCGGCGCCTCCGGTGGCC AGGACTTCAACGCTCGCCTCACCGAGCTGACCGACGGCAACCTGATCTAT GGCGGCCAGGTCTACGACTGTGTGATCACCCTCGCGCTGGCTTACGCCCA GGCGGGCAGCACCGACGGTGACGCGCTCATCGCCGCGGCCATCGAGGTCA CCAACGAT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig76607:2..1009+

>mRNA_M-pyrifera_M_contig76607.18052.1 ID=mRNA_M-pyrifera_M_contig76607.18052.1|Name=mRNA_M-pyrifera_M_contig76607.18052.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1992bp|location=Sequence derived from alignment at M-pyrifera_M_contig76607:2..1009+ (Macrocystis pyrifera P11B4 male)
ATGGATGATGGCGACGACATGGACGACGACGCCGACACCGGTGACGACGA
CATGGACGACATGGACGACGAAGGCGCAGCTGGCGATGGCTTCGTCATCG
GCACCGTCCTGCCCGAGACCGGCGCGCTCGCCTTCCTCGGCCCGCCCCAG
ACCGAGGGTGCTGCGCTCGCCGCCGCCGACCTCGAAGCGGCCGGCGCCAA
CGTCTCGGTGATCACCGGCGATTCCGGCACCGACGGTGCTGTCGCCCAGG
AAACCGTGGCTCGACTGCTCGGCGAAGGCGCCAACGCCATCGTCGGCGCT
GCCGCGTCGGGTGTGTCGCAGGACATCATCCAGACGCTCTTCGACGCCAA
GGTCCCGCAGTGCTCGGGCTCCAACACGTCCCCGGCCTTCACCGGCCAGG
AGAACGCGTCCTACTACTTCCGTACCGTGCCGCCGGACGAGGCCGTGTCG
CCGATCATCGCCGACGTGGTCGCCGGTGACGGCGCCACCAACGTGGCGAT
CGTCGCTCGTGCCGACGACTACGGCAACGCGCTGGCGGGCCTCGTCGGCG
GTGAGCTCGACGGTCTCGGCGTCGCCAACACCACCGTGAACTACGACCCC
GAGAACGTGGCCTCCGACGCAGTGGTCGGTCAGGTCGCCGACGCCGGTGC
CGACGCAGTCGTGATCATCGGCTTCGACGAGACCTTCCCGATCATCCAGG
CTGCTCTCGAAGCGGGTGTGCCCGCCGACGCCATGTACGGCGCCGACGGC
ATCTTCTTCAACACGCTCAACGAGGCGATCGACGAGTCCAACCCCAACGT
GATCGACGGGCTCACGCTCATCGGCGCCTCCGGTGGCCAGGACTTCAACG
CTCGCCTCACCGAGCTGACCGACGGCAACCTGATCTATGGCGGCCAGGTC
TACGACTGTGTGATCACCCTCGCGCTGGCTTACGCCCAGGCGGGCAGCAC
CGACGGTGACGCGCTCATCGCCGCGGCCATCGAGGTCACCAACGATATGG
ATGATGGCGACGACATGGACGACGACGCCGACACCGGTGACGACGACATG
GACGACATGGACGACGAAGGCGCAGCTGGCGATGGCTTCGTCATCGGCAC
CGTCCTGCCCGAGACCGGCGCGCTCGCCTTCCTCGGCCCGCCCCAGACCG
AGGGTGCTGCGCTCGCCGCCGCCGACCTCGAAGCGGCCGGCGCCAACGTC
TCGGTGATCACCGGCGATTCCGGCACCGACGGTGCTGTCGCCCAGGAAAC
CGTGGCTCGACTGCTCGGCGAAGGCGCCAACGCCATCGTCGGCGCTGCCG
CGTCGGGTGTGTCGCAGGACATCATCCAGACGCTCTTCGACGCCAAGGTC
CCGCAGTGCTCGGGCTCCAACACGTCCCCGGCCTTCACCGGCCAGGAGAA
CGCGTCCTACTACTTCCGTACCGTGCCGCCGGACGAGGCCGTGTCGCCGA
TCATCGCCGACGTGGTCGCCGGTGACGGCGCCACCAACGTGGCGATCGTC
GCTCGTGCCGACGACTACGGCAACGCGCTGGCGGGCCTCGTCGGCGGTGA
GCTCGACGGTCTCGGCGTCGCCAACACCACCGTGAACTACGACCCCGAGA
ACGTGGCCTCCGACGCAGTGGTCGGTCAGGTCGCCGACGCCGGTGCCGAC
GCAGTCGTGATCATCGGCTTCGACGAGACCTTCCCGATCATCCAGGCTGC
TCTCGAAGCGGGTGTGCCCGCCGACGCCATGTACGGCGCCGACGGCATCT
TCTTCAACACGCTCAACGAGGCGATCGACGAGTCCAACCCCAACGTGATC
GACGGGCTCACGCTCATCGGCGCCTCCGGTGGCCAGGACTTCAACGCTCG
CCTCACCGAGCTGACCGACGGCAACCTGATCTATGGCGGCCAGGTCTACG
ACTGTGTGATCACCCTCGCGCTGGCTTACGCCCAGGCGGGCAGCACCGAC
GGTGACGCGCTCATCGCCGCGGCCATCGAGGTCACCAACGAT
back to top