mRNA_M-pyrifera_M_contig76521.18035.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: UPI001CFD7A3C (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD7A3C) HSP 1 Score: 69.3 bits (168), Expect = 2.900e-13 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 4 PFEMESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGAS-GEELETLLEKGRESLELVQRQALICNLYATNVPPSVMD 249 P + + LYRGLL+ GK+ DYN+R YV+R TRE+F++ + E+++ L EKG ++L +VQRQ+LI +Y+ +V S+MD Sbjct: 17 PTRKQILALYRGLLKGGKAFSDYNYREYVLRCTREDFRKFKSVQDSEKIKRLYEKGVKNLGVVQRQSLINQIYSKHV--SIMD 97
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: A0A6A5BYR4_NAEFO (Complex1_LYR_dom domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BYR4_NAEFO) HSP 1 Score: 68.9 bits (167), Expect = 4.200e-13 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 4 PFEMESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGAS-GEELETLLEKGRESLELVQRQALICNLYATNVPPSVMD 249 P + + LYRGLL+ GK+ DYN+R YV+R TRE+F++ + E+++ L EKG ++L +VQRQ+LI +Y+ +V S+MD Sbjct: 18 PTRNQILALYRGLLKGGKAFSDYNYREYVLRCTREDFRKFKSVQDSEKIKRLYEKGVKNLGVVQRQSLINQMYSKHV--SIMD 98
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: A0A7S1G6K1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6K1_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.760e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 16 ESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGEELETLLEKGRESLELVQRQALICNLYATNVPPSVMD 249 ++I LYR +R K KDYNFR Y +RR R F+ +R ASG+ L +G +LE+++RQALI +LY T SVM+ Sbjct: 9 QAISLYRSFVREAKGFKDYNFREYALRRARAGFEENRAASGDAAAAALAEGNAALEVLRRQALISSLY-TKGGASVME 85
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: A0A1E4TLP4_9ASCO (Complex1_LYR_dom domain-containing protein n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TLP4_9ASCO) HSP 1 Score: 65.5 bits (158), Expect = 3.130e-12 Identity = 31/69 (44.93%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 16 ESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGE-ELETLLEKGRESLELVQRQALICNLY 219 E+ +LYR +LR GK +DYNFR+Y+VRRTR+ F+ H+ + +++ L+E G + LE+V+RQ++I +Y Sbjct: 3 EAAKLYRNILRYGKKFQDYNFRSYIVRRTRDGFREHQHETDSGKIQALMEDGYKQLEVVKRQSVISEMY 71
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: A0A0G4IIG7_PLABS (Complex1_LYR_dom domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IIG7_PLABS) HSP 1 Score: 65.1 bits (157), Expect = 4.900e-12 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 4 PFEMESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGEELETLLEKGRESLELVQRQALICNLYA 222 P + LY+ + RAG KD+NFR YVVRR RE F+ R A+G + L EKG E L++V+RQ+ + +YA Sbjct: 6 PTRSACLALYKNVRRAGLQFKDFNFREYVVRRARERFEAGRAATGADAARLYEKGIEDLQVVRRQSTLNRMYA 78
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: D2UZZ2_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UZZ2_NAEGR) HSP 1 Score: 65.1 bits (157), Expect = 9.730e-12 Identity = 34/77 (44.16%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 22 IRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGEE-LETLLEKGRESLELVQRQALICNLYATNVPPSVMD 249 + LY+GLL+ GK DYNFR Y +R TRE+F++++ + +E ++ L EKG ++L +VQRQ+LI +Y+ + S+MD Sbjct: 12 LSLYKGLLKGGKQFSDYNFREYTLRCTREDFKKNKTITDKEKIKQLYEKGIKNLGIVQRQSLINQMYSKQI--SIMD 86
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: A0A8J2WRI3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WRI3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.360e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 13 MESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGEELETLLEKGRESLELVQRQALICNLYATNVPPSVMD 249 M + L+R +LR + YNFRNY +RR RE+F+R+ SG E T L++G+++LE+++RQ ++ LY SVMD Sbjct: 1 MAARSLFRTMLREAAQVDQYNFRNYAIRRVREDFRRNAALSGSEAATALQEGKDALEVLRRQRIVGQLYPA--AQSVMD 77
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: W7XKG2_TETTS (Complex 1 protein, LYR family protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=W7XKG2_TETTS) HSP 1 Score: 61.6 bits (148), Expect = 1.050e-10 Identity = 30/71 (42.25%), Postives = 51/71 (71.83%), Query Frame = 1 Query: 10 EMESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGE-ELETLLEKGRESLELVQRQALICNLY 219 +++ ++L++ LRAG KDYNFRNY+VRR +E+F+++ + + E+ ++ +E LEL+QRQ +I NLY Sbjct: 5 KIQVLQLFKETLRAGFGFKDYNFRNYIVRRAKEDFRKYSALTDQNEIAKQIQFAKEQLELLQRQKIIQNLY 75
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: A0A836CF60_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF60_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.570e-10 Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 19 SIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGEELETLLEKGRESLELVQRQALICNLYATNVPPSVMD 249 ++ LYR LLR GK + DYNFR Y +RR R+ F +GE L G++ L ++QRQA++ LY PSVM+ Sbjct: 4 AVSLYRQLLREGKKLTDYNFRMYSLRRVRQGFAEDASLTGEAANKALAFGKDQLAMLQRQAILSQLYPA--APSVME 78
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Match: A0A3S0ZHP3_ELYCH (Complex1_LYR_dom domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZHP3_ELYCH) HSP 1 Score: 60.5 bits (145), Expect = 3.390e-10 Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 4 PFEMESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGE-ELETLLEKGRESLELVQRQALICNLYAT 225 P + LY+ LLR + DYNFR Y +RRT++ F+ ++ S ++ LL+KGRE+LE+++RQA++ LY + Sbjct: 4 PVRQTVLTLYKSLLRESGKITDYNFRLYAIRRTQDAFKENKAVSDTARVQALLQKGRENLEVLKRQAVLSQLYGS 78 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76521.18035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76521.18035.1 >prot_M-pyrifera_M_contig76521.18035.1 ID=prot_M-pyrifera_M_contig76521.18035.1|Name=mRNA_M-pyrifera_M_contig76521.18035.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp MESIRLYRGLLRAGKSMKDYNFRNYVVRRTREEFQRHRGASGEELETLLEback to top mRNA from alignment at M-pyrifera_M_contig76521:25..622- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76521.18035.1 ID=mRNA_M-pyrifera_M_contig76521.18035.1|Name=mRNA_M-pyrifera_M_contig76521.18035.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=598bp|location=Sequence derived from alignment at M-pyrifera_M_contig76521:25..622- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76521:25..622- >mRNA_M-pyrifera_M_contig76521.18035.1 ID=mRNA_M-pyrifera_M_contig76521.18035.1|Name=mRNA_M-pyrifera_M_contig76521.18035.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig76521:25..622- (Macrocystis pyrifera P11B4 male)back to top |