mRNA_M-pyrifera_M_contig76443.18021.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76443.18021.1
Unique NamemRNA_M-pyrifera_M_contig76443.18021.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A6B1AUP0_9ACTN (Protein translocase subunit SecA n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AUP0_9ACTN)

HSP 1 Score: 513 bits (1322), Expect = 3.250e-173
Identity = 270/342 (78.95%), Postives = 299/342 (87.43%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMDL 1026
            PVLVGT+SVEKSEKLSREL KRGIPHEVLNAKQH REAE+VAQAGRLG+ITVATNMAGRGVD+LLGGNPEGLA+RD RA+G DLE+EEGQ  Y +RLA HT  TE E+ +V+DLGGLYVLGTERHESRRIDNQLRGRSGRQGDPG SRFYLSLED+LMRLFATGAMNWVMDRALP+D PIEA MVTKAIERAQNTVE RNAETRKNVLKYDEVMNEQRKVIYKRR QILDGADL  EALEY+Q A+EG V TYC SE+ EEWDLEGL T IS+LWP ++S L L + R   EL E++++    +YE RE+EL AEV+RQVERQVML +IDQRWR+HL EMDL
Sbjct:  432 PVLVGTISVEKSEKLSRELSKRGIPHEVLNAKQHDREAEIVAQAGRLGAITVATNMAGRGVDVLLGGNPEGLADRDTRAKGYDLETEEGQTFYAQRLAVHTEKTERERQEVIDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGQSRFYLSLEDDLMRLFATGAMNWVMDRALPEDQPIEANMVTKAIERAQNTVEQRNAETRKNVLKYDEVMNEQRKVIYKRRSQILDGADLHTEALEYIQLAVEGVVDTYCESELFEEWDLEGLITEISTLWPTKISKLSLSSVRDVNELFELVYDDAIEIYEARESELTAEVLRQVERQVMLLVIDQRWRQHLSEMDL 773          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A3M2GS13_ACTSX (Protein translocase subunit SecA n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GS13_ACTSX)

HSP 1 Score: 507 bits (1305), Expect = 1.230e-170
Identity = 269/341 (78.89%), Postives = 297/341 (87.10%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMD 1023
            PVLVGTVSVEKSEKLSR L++RGIPHEVLNAKQH REAE+VAQAGRL ++TVATNMAGRGVDILLGGNPEGLA RD+R EGLD +SEEG+ RY+E LA HT  TEAE+ KVL LGGLYVLGTERHESRRIDNQLRGRSGRQGDPG SRFYLSLEDELMR+FATGAMNWVM++ALP+DVPIEAKMVTKAIERAQNTVE +NAETRK VL+YDEVMNEQRKVIYKRR QILDGADLR EA+EYL+DA+E AV TYCVS+  EEWDLEGLAT I SLWP E+   +L      ++L E L+  G   YE REAELG E+MRQVERQVMLRIIDQ WR+HL+EMD
Sbjct:  432 PVLVGTVSVEKSEKLSRLLDQRGIPHEVLNAKQHHREAEIVAQAGRLHAVTVATNMAGRGVDILLGGNPEGLALRDLRGEGLDPDSEEGRTRYQELLAKHTEVTEAEREKVLALGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDELMRIFATGAMNWVMNKALPEDVPIEAKMVTKAIERAQNTVEQKNAETRKRVLEYDEVMNEQRKVIYKRRDQILDGADLRTEAIEYLRDAVEAAVSTYCVSDYAEEWDLEGLATEIGSLWPSEIDAADLADAEVVDDLVERLFAEGLRHYESREAELGPEIMRQVERQVMLRIIDQHWRQHLQEMD 772          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A2E8LD91_9ACTN (Protein translocase subunit SecA n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LD91_9ACTN)

HSP 1 Score: 504 bits (1299), Expect = 8.760e-170
Identity = 262/342 (76.61%), Postives = 298/342 (87.13%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMDL 1026
            PVLVGTVSVEKSEKLSR +EK+G+ HEVLNAKQH REA++V QAGRLG++TVATNMAGRGVDILLGGNPEGLA+RD RAEGLD +S+EG+ R+EE +A +   T+ E+ +VLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPG SRFYLSLEDELMRLFATGAM+WVM RALPDDVP+EAKMVT+AIERAQNTVE RNAETRKNVLKYDEVMNEQRKVIY+RRGQILDGADLRDEALEYL DA+  AV TYCVS+I EEWDLE L T + +LWP ++      A  +T+EL +ML+    SLYE RE ELG  V+RQVERQVMLR++DQRWR+HL+EMDL
Sbjct:  433 PVLVGTVSVEKSEKLSRMMEKQGVAHEVLNAKQHHREADIVTQAGRLGAVTVATNMAGRGVDILLGGNPEGLADRDTRAEGLDPDSDEGRPRFEELVAKNKAATDIERDRVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDELMRLFATGAMDWVMGRALPDDVPLEAKMVTRAIERAQNTVEGRNAETRKNVLKYDEVMNEQRKVIYRRRGQILDGADLRDEALEYLDDAVGAAVATYCVSDIAEEWDLEALLTEVKTLWPAQIELAAFEAASSTQELHDMLYNEALSLYETRERELGEPVLRQVERQVMLRVVDQRWRQHLREMDL 774          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: UPI001AA03202 (preprotein translocase subunit SecA n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA03202)

HSP 1 Score: 486 bits (1250), Expect = 1.870e-162
Identity = 261/341 (76.54%), Postives = 290/341 (85.04%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMD 1023
            PVLVGT+SVEKSEKLSR L K G+PHEVLNAKQH REAE++AQAGRL ++TVATNMAGRGVDILLGGNPEGLA+RDV AEGLD ESEEG+AR +E  A +    +AE  +V +LGGLYVLGTERHESRRIDNQLRGRSGRQGDPG SRFYLSLED+LMRLFATGAM WVM +ALPDDVPIEAKMVTKAIERAQNTVE RNAE RKNVLKYDEVMNEQRKVIYKRR QILD ADLRDEALEYL +A+EG +GTYCVS+ +EEWDL+GL   I++ WP +V+  EL    TT++L E L     + YE REAELG E MR+VERQVMLRIIDQRWREHL EMD
Sbjct:  432 PVLVGTISVEKSEKLSRMLAKHGVPHEVLNAKQHFREAEIIAQAGRLHAVTVATNMAGRGVDILLGGNPEGLAKRDVVAEGLDPESEEGRARIQELTAKYAPECKAEGDQVRELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFATGAMAWVMGKALPDDVPIEAKMVTKAIERAQNTVEQRNAEIRKNVLKYDEVMNEQRKVIYKRRDQILDAADLRDEALEYLAEAVEGIIGTYCVSDYVEEWDLDGLIPEIATFWPTKVTAEELRQLATTDDLYERLMGEALACYEAREAELGVETMREVERQVMLRIIDQRWREHLYEMD 772          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A8F4FTW3_9ACTN (Protein translocase subunit SecA n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FTW3_9ACTN)

HSP 1 Score: 479 bits (1234), Expect = 1.160e-160
Identity = 255/341 (74.78%), Postives = 288/341 (84.46%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMD 1023
            PVLVGT+SVEKSEKL R LEKRGIPHEVLNAKQHTREAE+V QAGRL S+TVATNMAGRGVDILLGGNPEGLA +D+RAEGLD E+E+G+AR+E+ LA +   TEAE   V + GGLYVLGTERH+SRRIDNQLRGRSGRQGDPG SRFYLSLEDELMRLFATGAMNWVM RALPDDVPIEAKMVTKAIERAQNTVE RNAE RKNVLKYDEVMNEQRKVIYKRR QIL+ ADLR+E L+YL +A+  +V TYCV+E  +EWDL+GL   ISS WP E++  ++G    T +L+  L +   + YE+RE ELG E MRQ+ERQVML IIDQ WREHL+EMD
Sbjct:  382 PVLVGTISVEKSEKLGRMLEKRGIPHEVLNAKQHTREAEIVTQAGRLHSVTVATNMAGRGVDILLGGNPEGLALKDLRAEGLDPEAEDGKARFEKLLADYKAQTEAEGDLVREAGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLEDELMRLFATGAMNWVMGRALPDDVPIEAKMVTKAIERAQNTVEQRNAEIRKNVLKYDEVMNEQRKVIYKRRDQILEDADLREETLDYLSEAVTASVATYCVAEADDEWDLDGLHAEISSFWPTELTTEDMGKADNTVDLQVTLLDEATAYYEQREQELGEETMRQIERQVMLNIIDQHWREHLQEMD 722          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: UPI001E3EB94F (preprotein translocase subunit SecA n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E3EB94F)

HSP 1 Score: 479 bits (1233), Expect = 7.370e-160
Identity = 258/342 (75.44%), Postives = 289/342 (84.50%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGA-CRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMD 1023
            PVLVGTVSV KSEKLSR LEKRG+PH VLNAK H REA+VVAQAGRLG++TVATNMAGRGVDILLGGN EGLAERD+ AEGL+ +SEEGQAR  E LA +   T+ E  KV +LGGLYVLGTERHESRRIDNQLRGRSGRQGDPG SRFYLSLED+LMRLFATGAMNWVM RALPDDVPIEAKMVTKAIERAQNTVE RNAE RKNVLKYDEVMNEQRKVIY+RR QILD ADLRDEA+EYL +A++G + T+CVS++ EEWDLEGL   + + WP +++  +L A C +T++L E L     + YE REAE G E MRQVERQVMLRIIDQ+WREHL EMD
Sbjct:  432 PVLVGTVSVAKSEKLSRFLEKRGVPHHVLNAKLHFREADVVAQAGRLGAVTVATNMAGRGVDILLGGNAEGLAERDLAAEGLEPDSEEGQARLAELLAHYEAETDGEGAKVRELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFATGAMNWVMGRALPDDVPIEAKMVTKAIERAQNTVEQRNAEIRKNVLKYDEVMNEQRKVIYRRRDQILDQADLRDEAIEYLAEAVDGVISTFCVSDLAEEWDLEGLVAEVGTFWPSQLTVDDLRAHCVSTDDLYEHLMAEATTHYEAREAEFGPEAMRQVERQVMLRIIDQKWREHLYEMD 773          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A7X7D2T1_9ACTN (Protein translocase subunit SecA n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D2T1_9ACTN)

HSP 1 Score: 477 bits (1228), Expect = 3.520e-159
Identity = 258/342 (75.44%), Postives = 288/342 (84.21%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEII-EEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMD 1023
            PVLVGT+SVEKSE L R L KRG+PHEVLNAKQHTREAE+V QAGRL ++TVATNMAGRGVDILLGGNPEGLA RD+RAEGLD ESEEGQ R +E  A H + T+AE+ KV +LGGLYVLGTERH+SRRIDNQLRGR+GRQGDPG SRFYLSLEDELMRLFATGAMNWVM +A+PDDVPIEAKMVTKAIERAQNTVE RNAE RKNVLKYDEVMNEQRKVIYKRR QIL+ ADLR E LEYL++AI+ +V T+CVS    EEWDLEGL   IS+LWP E +   LG    T +L + L E G + YE+RE ELGAE MR++ERQVML+IIDQ WREHL EMD
Sbjct:  432 PVLVGTISVEKSEMLGRLLTKRGVPHEVLNAKQHTREAEIVTQAGRLHAVTVATNMAGRGVDILLGGNPEGLALRDLRAEGLDGESEEGQKRLKELTAEHKVQTDAEREKVKELGGLYVLGTERHDSRRIDNQLRGRAGRQGDPGESRFYLSLEDELMRLFATGAMNWVMGKAIPDDVPIEAKMVTKAIERAQNTVEQRNAEIRKNVLKYDEVMNEQRKVIYKRRDQILEDADLRAETLEYLEEAIDASVDTFCVSPTADEEWDLEGLHAEISALWPTEFTVESLGEIHNTSDLLDKLLEEGTAYYEKREEELGAETMRKIERQVMLQIIDQHWREHLLEMD 773          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A7K2BWN1_9ACTN (Preprotein translocase subunit SecA n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BWN1_9ACTN)

HSP 1 Score: 467 bits (1201), Expect = 1.690e-158
Identity = 252/342 (73.68%), Postives = 282/342 (82.46%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMDL 1026
            PVLVGTVSVEKSEKLSR L+K+GI HEVLNAKQH REAE+V QAGRLG++TVATNMAGRGVDILLGGNPEGLA RD+RAE L+  + EG  R  E  A H   T+AE+ +VL+LGGLYVLGTERHESRRIDNQLRGRSGRQGDPG SRFYLSLED+LM  FATGAMNWVMD+ALP+DVPIEA MVTKAIERAQNTVE RNAETRKNVLKYDEVMNEQRKVIY+RR QILDG DLR EALE+L+ A+  A+ T+C SE  EEWD EGLAT ++ LWPG V    L A  T +EL E++       Y ERE +L  +VMRQVERQVMLR+IDQRWR HL+EMDL
Sbjct:  155 PVLVGTVSVEKSEKLSRLLDKQGIAHEVLNAKQHHREAEIVTQAGRLGAVTVATNMAGRGVDILLGGNPEGLARRDLRAEALEEATPEGDQRLAELTAKHRAATDAEREEVLELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMSRFATGAMNWVMDKALPEDVPIEAGMVTKAIERAQNTVEQRNAETRKNVLKYDEVMNEQRKVIYQRRSQILDGTDLRSEALEHLEAAVASAIATHCESEHAEEWDREGLATELAGLWPGGVETTRLEAVATHDELYEVVNRAALDHYGEREEQLSEDVMRQVERQVMLRLIDQRWRSHLREMDL 496          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A7W0KRW6_9ACTN (Protein translocase subunit SecA n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KRW6_9ACTN)

HSP 1 Score: 471 bits (1211), Expect = 1.310e-156
Identity = 251/341 (73.61%), Postives = 282/341 (82.70%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMD 1023
            PVLVGT+SVEKSEKL R LEKRGIPHEVLNAKQHTREAE+V QAGRL S+TVATNMAGRGVDI+LGGN EGLA RDVR EGLD E++EGQ R E+  A +   T+AE  KV ++GGLYVLGTERH+SRRIDNQLRGRSGRQGDPG SRFYLSLEDELMRLFATGAMNWVM +ALPDD+PIEAKMVTKAIERAQNTVE RNAE RKNVLKYDEVMNEQRKVIY+RR QIL  ADLR+E L+YL +A+  +V TYCV+E  +EWDLEGL   +S+ WP E +  ELG    T +L+  L +   + YE+RE ELG E MRQ+ERQVML IIDQ WREHL EMD
Sbjct:  432 PVLVGTISVEKSEKLGRMLEKRGIPHEVLNAKQHTREAEIVTQAGRLHSVTVATNMAGRGVDIILGGNAEGLALRDVRGEGLDPETDEGQQRLEKLFADYKAETDAEGDKVREVGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLEDELMRLFATGAMNWVMGKALPDDIPIEAKMVTKAIERAQNTVEQRNAEIRKNVLKYDEVMNEQRKVIYQRRDQILADADLREETLDYLAEAVTASVNTYCVAEADDEWDLEGLHNEVSTFWPTENTEAELGEASNTVDLQVKLLDEATAYYEKRETELGTETMRQIERQVMLNIIDQHWREHLLEMD 772          
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Match: A0A7W1TWS3_9ACTN (SEC-C domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1TWS3_9ACTN)

HSP 1 Score: 455 bits (1171), Expect = 6.850e-156
Identity = 248/341 (72.73%), Postives = 278/341 (81.52%), Query Frame = 1
Query:    1 PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSITVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAHTLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARNAETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAVGTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEIGGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMD 1023
            PVLVGTVSV KSE+L   L KRGIPHE+LNAK HTREAE+VAQAGRL +ITVATNMAGRGVDI+LGGNPEGLA R VRAEGLD + ++G+ARY+  L  H    +AE  KV  LGGLYVLGTERHESRRIDNQLRGRSGRQGDPG SRFYLSLED+LMRLFATGAMNWVM RALPDDVPIEAKMVTKAIERAQ TVEARNAE RKNVLKYDEVMN QRKVIY+RR QIL+G DLRDEAL+ L+ A+EGAV + CVS   EEWDLEGL   ++  +P   +P +L A    +E+   + + G + YEEREAE G + MRQVERQVMLR+ID RWREHL EMD
Sbjct:   26 PVLVGTVSVAKSERLDALLTKRGIPHEILNAKAHTREAEIVAQAGRLHAITVATNMAGRGVDIILGGNPEGLAGRQVRAEGLDPDVDDGKARYQTVLETHKAECDAEGDKVRQLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFATGAMNWVMGRALPDDVPIEAKMVTKAIERAQTTVEARNAEIRKNVLKYDEVMNAQRKVIYRRRNQILEGHDLRDEALDSLRSALEGAVRSACVSPAPEEWDLEGLVAQLNEFYPTRFTPDDLSATEDLDEIVTSVVDEGVTHYEEREAEFGPDGMRQVERQVMLRVIDTRWREHLYEMD 366          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76443.18021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B1AUP0_9ACTN3.250e-17378.95Protein translocase subunit SecA n=1 Tax=Acidimicr... [more]
A0A3M2GS13_ACTSX1.230e-17078.89Protein translocase subunit SecA n=1 Tax=Actinomyc... [more]
A0A2E8LD91_9ACTN8.760e-17076.61Protein translocase subunit SecA n=5 Tax=Acidimicr... [more]
UPI001AA032021.870e-16276.54preprotein translocase subunit SecA n=1 Tax=Rhabdo... [more]
A0A8F4FTW3_9ACTN1.160e-16074.78Protein translocase subunit SecA n=1 Tax=Aquihabit... [more]
UPI001E3EB94F7.370e-16075.44preprotein translocase subunit SecA n=1 Tax=Rhabdo... [more]
A0A7X7D2T1_9ACTN3.520e-15975.44Protein translocase subunit SecA n=1 Tax=Acidimicr... [more]
A0A7K2BWN1_9ACTN1.690e-15873.68Preprotein translocase subunit SecA n=2 Tax=Acidim... [more]
A0A7W0KRW6_9ACTN1.310e-15673.61Protein translocase subunit SecA n=1 Tax=Acidimicr... [more]
A0A7W1TWS3_9ACTN6.850e-15672.73SEC-C domain-containing protein n=1 Tax=Acidimicro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76443contigM-pyrifera_M_contig76443:3..1028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score463.0
Seed ortholog evalue1.2e-127
Seed eggNOG ortholog1229780.BN381_80106
Preferred namesecA
KEGG koko:K03070
KEGG TC3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030312,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680
EggNOG free text desc.Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
EggNOG OGs2GIRT@201174,3UW8Q@52018,COG0653@1,COG0653@2
COG Functional cat.U
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Exons1
Model size1026
Cds size1026
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816663.8637722-CDS-M-pyrifera_M_contig76443:2..10281622816663.8637722-CDS-M-pyrifera_M_contig76443:2..1028Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76443 3..1028 +
1692278106.1695075-CDS-M-pyrifera_M_contig76443:2..10281692278106.1695075-CDS-M-pyrifera_M_contig76443:2..1028Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76443 3..1028 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76443.18021.1prot_M-pyrifera_M_contig76443.18021.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76443 3..1028 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76443.18021.1

>prot_M-pyrifera_M_contig76443.18021.1 ID=prot_M-pyrifera_M_contig76443.18021.1|Name=mRNA_M-pyrifera_M_contig76443.18021.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=342bp
PVLVGTVSVEKSEKLSRELEKRGIPHEVLNAKQHTREAEVVAQAGRLGSI
TVATNMAGRGVDILLGGNPEGLAERDVRAEGLDLESEEGQARYEERLAAH
TLTTEAEKGKVLDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFY
LSLEDELMRLFATGAMNWVMDRALPDDVPIEAKMVTKAIERAQNTVEARN
AETRKNVLKYDEVMNEQRKVIYKRRGQILDGADLRDEALEYLQDAIEGAV
GTYCVSEIIEEWDLEGLATAISSLWPGEVSPLELGACRTTEELEEMLWEI
GGSLYEEREAELGAEVMRQVERQVMLRIIDQRWREHLKEMDL
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mRNA from alignment at M-pyrifera_M_contig76443:3..1028+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76443.18021.1 ID=mRNA_M-pyrifera_M_contig76443.18021.1|Name=mRNA_M-pyrifera_M_contig76443.18021.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig76443:3..1028+ (Macrocystis pyrifera P11B4 male)
CCGGTGCTCGTGGGCACGGTGTCGGTCGAGAAGTCCGAGAAGCTCTCGCG CGAACTCGAGAAGCGGGGCATCCCCCACGAGGTGCTCAACGCGAAGCAAC ACACGCGTGAGGCCGAGGTCGTCGCTCAGGCCGGACGGCTCGGCTCGATC ACGGTGGCCACCAACATGGCCGGTCGTGGTGTCGACATCCTGCTCGGTGG CAATCCCGAGGGCCTCGCCGAACGCGACGTGCGGGCCGAAGGTCTCGATC TCGAGAGCGAAGAGGGTCAGGCACGCTACGAAGAACGCCTCGCGGCCCAC ACGCTCACCACCGAGGCCGAGAAGGGCAAGGTGCTCGACCTCGGCGGGCT CTATGTGCTCGGCACCGAGCGCCACGAGAGTCGCCGCATCGACAATCAGC TCCGAGGCCGCTCGGGTCGCCAGGGTGATCCCGGCGCCAGCCGCTTCTAC CTGTCACTCGAAGACGAGCTCATGCGCCTCTTCGCGACCGGCGCGATGAA CTGGGTCATGGACCGGGCCCTGCCCGACGATGTGCCGATCGAGGCGAAGA TGGTCACGAAGGCCATCGAGCGGGCGCAGAACACCGTCGAGGCCCGCAAT GCGGAGACCCGCAAGAACGTCCTCAAGTACGACGAGGTGATGAACGAGCA GCGCAAGGTCATCTACAAGCGCCGCGGCCAGATCCTCGACGGCGCCGACC TCCGCGACGAGGCGCTCGAATACCTCCAGGACGCGATCGAGGGCGCCGTC GGCACCTATTGCGTGAGCGAGATCATCGAAGAATGGGATCTCGAAGGACT GGCCACGGCCATCAGCAGCCTGTGGCCCGGCGAGGTGTCGCCGCTCGAAC TCGGCGCGTGCCGCACCACCGAGGAGCTCGAAGAGATGCTCTGGGAGATC GGCGGCTCGCTCTACGAGGAGCGCGAAGCCGAGCTCGGCGCCGAGGTCAT GCGCCAGGTCGAACGTCAGGTGATGCTGCGGATCATCGATCAGCGCTGGC GCGAGCACCTCAAGGAGATGGATCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76443:3..1028+

>mRNA_M-pyrifera_M_contig76443.18021.1 ID=mRNA_M-pyrifera_M_contig76443.18021.1|Name=mRNA_M-pyrifera_M_contig76443.18021.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2052bp|location=Sequence derived from alignment at M-pyrifera_M_contig76443:3..1028+ (Macrocystis pyrifera P11B4 male)
CCGGTGCTCGTGGGCACGGTGTCGGTCGAGAAGTCCGAGAAGCTCTCGCG
CGAACTCGAGAAGCGGGGCATCCCCCACGAGGTGCTCAACGCGAAGCAAC
ACACGCGTGAGGCCGAGGTCGTCGCTCAGGCCGGACGGCTCGGCTCGATC
ACGGTGGCCACCAACATGGCCGGTCGTGGTGTCGACATCCTGCTCGGTGG
CAATCCCGAGGGCCTCGCCGAACGCGACGTGCGGGCCGAAGGTCTCGATC
TCGAGAGCGAAGAGGGTCAGGCACGCTACGAAGAACGCCTCGCGGCCCAC
ACGCTCACCACCGAGGCCGAGAAGGGCAAGGTGCTCGACCTCGGCGGGCT
CTATGTGCTCGGCACCGAGCGCCACGAGAGTCGCCGCATCGACAATCAGC
TCCGAGGCCGCTCGGGTCGCCAGGGTGATCCCGGCGCCAGCCGCTTCTAC
CTGTCACTCGAAGACGAGCTCATGCGCCTCTTCGCGACCGGCGCGATGAA
CTGGGTCATGGACCGGGCCCTGCCCGACGATGTGCCGATCGAGGCGAAGA
TGGTCACGAAGGCCATCGAGCGGGCGCAGAACACCGTCGAGGCCCGCAAT
GCGGAGACCCGCAAGAACGTCCTCAAGTACGACGAGGTGATGAACGAGCA
GCGCAAGGTCATCTACAAGCGCCGCGGCCAGATCCTCGACGGCGCCGACC
TCCGCGACGAGGCGCTCGAATACCTCCAGGACGCGATCGAGGGCGCCGTC
GGCACCTATTGCGTGAGCGAGATCATCGAAGAATGGGATCTCGAAGGACT
GGCCACGGCCATCAGCAGCCTGTGGCCCGGCGAGGTGTCGCCGCTCGAAC
TCGGCGCGTGCCGCACCACCGAGGAGCTCGAAGAGATGCTCTGGGAGATC
GGCGGCTCGCTCTACGAGGAGCGCGAAGCCGAGCTCGGCGCCGAGGTCAT
GCGCCAGGTCGAACGTCAGGTGATGCTGCGGATCATCGATCAGCGCTGGC
GCGAGCACCTCAAGGAGATGGATCTCCCGGTGCTCGTGGGCACGGTGTCG
GTCGAGAAGTCCGAGAAGCTCTCGCGCGAACTCGAGAAGCGGGGCATCCC
CCACGAGGTGCTCAACGCGAAGCAACACACGCGTGAGGCCGAGGTCGTCG
CTCAGGCCGGACGGCTCGGCTCGATCACGGTGGCCACCAACATGGCCGGT
CGTGGTGTCGACATCCTGCTCGGTGGCAATCCCGAGGGCCTCGCCGAACG
CGACGTGCGGGCCGAAGGTCTCGATCTCGAGAGCGAAGAGGGTCAGGCAC
GCTACGAAGAACGCCTCGCGGCCCACACGCTCACCACCGAGGCCGAGAAG
GGCAAGGTGCTCGACCTCGGCGGGCTCTATGTGCTCGGCACCGAGCGCCA
CGAGAGTCGCCGCATCGACAATCAGCTCCGAGGCCGCTCGGGTCGCCAGG
GTGATCCCGGCGCCAGCCGCTTCTACCTGTCACTCGAAGACGAGCTCATG
CGCCTCTTCGCGACCGGCGCGATGAACTGGGTCATGGACCGGGCCCTGCC
CGACGATGTGCCGATCGAGGCGAAGATGGTCACGAAGGCCATCGAGCGGG
CGCAGAACACCGTCGAGGCCCGCAATGCGGAGACCCGCAAGAACGTCCTC
AAGTACGACGAGGTGATGAACGAGCAGCGCAAGGTCATCTACAAGCGCCG
CGGCCAGATCCTCGACGGCGCCGACCTCCGCGACGAGGCGCTCGAATACC
TCCAGGACGCGATCGAGGGCGCCGTCGGCACCTATTGCGTGAGCGAGATC
ATCGAAGAATGGGATCTCGAAGGACTGGCCACGGCCATCAGCAGCCTGTG
GCCCGGCGAGGTGTCGCCGCTCGAACTCGGCGCGTGCCGCACCACCGAGG
AGCTCGAAGAGATGCTCTGGGAGATCGGCGGCTCGCTCTACGAGGAGCGC
GAAGCCGAGCTCGGCGCCGAGGTCATGCGCCAGGTCGAACGTCAGGTGAT
GCTGCGGATCATCGATCAGCGCTGGCGCGAGCACCTCAAGGAGATGGATC
TC
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