mRNA_M-pyrifera_M_contig76286.17986.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: A0A5A8E3P2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3P2_CAFRO) HSP 1 Score: 218 bits (555), Expect = 3.970e-66 Identity = 117/264 (44.32%), Postives = 167/264 (63.26%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYL---SVGA--PKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTLVDQEEAGEGEG--GEDGVED----------------GV-----GGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNF+ K +KTGDG+FFQ+VLC+ IL G++ +L ++GA P FEP A+LGGA+W GN+ VP+VKTIGL LGL++WG+AN+IMGWA+G+FG FGL+ + + NP LN +GV + ++ ++ F++PT+ E G+GE G D +D GV GG+ +E + D E+F+ KLP+WQQ++ GV LS+VSG+ YG F P QYI+DH +D + AP ++ VF+ FVGIWM S Sbjct: 20 SNFIPTKVYKTGDGVFFQWVLCTGILLTGTVCFLIQCTMGASCPAFEPLAVLGGAIWCTGNMMVVPVVKTIGLSLGLVIWGSANLIMGWASGKFGFFGLKPESVPNPALNYVGVVVAICSLVLSVFIRPTVGRGEPEGDGEDELGFDSDDDKLEQALVPPGAADFGQGVINTDGGGDTRSVLSELEHVAEADQQELFLTKLPRWQQQIVGVTLSIVSGLLYGVNFDPPQYIVDHPAD----FPGAPKQPVELVFSHFVGIWMAS 279
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: L8GZT0_ACACA (Transmembrane protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZT0_ACACA) HSP 1 Score: 207 bits (527), Expect = 3.190e-62 Identity = 113/247 (45.75%), Postives = 151/247 (61.13%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTL-----------VDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K F+TGDG+FFQ++LC+ I G + G P+FEP AM+GG LW GN+ TVPI+K IGLGLGLL+WG N+IMGWATG FGLFGL + I P LN LG++ VL++ + +FVKPT+ VD+E V G + L G E +DD F+E LP +RV GV+++V++G+FYG F P Q++IDHS+ T GLDYV++ F GI+M S Sbjct: 19 SNFVPVKKFETGDGMFFQWILCTGIWLTGLVVNGIQGWPRFEPIAMIGGVLWCTGNLLTVPIIKMIGLGLGLLIWGLTNLIMGWATGTFGLFGLDSNEIKTPWLNYLGISLAVLSVGLYAFVKPTVKKIGEDDEHQQVDEEYRS--------VNGGKPDDYLLNNGGHHEHKAQDDSFAFLENLPPVWKRVAGVLMAVLAGLFYGVNFDPPQWLIDHSNKENGN----STAGLDYVWSHFCGIFMAS 253
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: A0A6Q2XAD6_ESOLU (Transmembrane protein 144a n=4 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2XAD6_ESOLU) HSP 1 Score: 189 bits (480), Expect = 4.800e-55 Identity = 99/236 (41.95%), Postives = 143/236 (60.59%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K TGDG+FFQ+VLC+A+ + + +G+P F P AMLGGA+WA GN+ VPIVKTIGLGLGLL+W + N++MGWA+ RFG FG+ + ++NP LN G +L+ + FVK + Q + E + + L R V +G + +V+ L +RV G +L+V +G+ YG++F P YI +H++ R S + A LDYVFAQF GI++ S Sbjct: 72 SNFVPVKKISTGDGLFFQWVLCAAVWSVSLVVNIILGSPTFWPLAMLGGAIWATGNITVVPIVKTIGLGLGLLIWASFNLLMGWASSRFGWFGIDAEEVSNPTLNYCGAGLCLLSAVIFFFVKSDVHSQSPSTEEQ------------QPLLIDRSVNADGVNWSDDSWVDTLRPKTKRVVGSLLAVFAGLLYGSSFVPVLYIKNHAAHRDSRFSGASQFDLDYVFAQFSGIFLTS 295
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: A0A8C7K0W9_ONCKI (Transmembrane protein 144-like n=2 Tax=Oncorhynchus kisutch TaxID=8019 RepID=A0A8C7K0W9_ONCKI) HSP 1 Score: 187 bits (475), Expect = 1.560e-54 Identity = 99/236 (41.95%), Postives = 142/236 (60.17%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K TGDG+FFQ+VLC+A+ + + +G+P F P AMLGGA+WA GN+ VPIVKTIGLGLGLL+W + N+++GWA+ RFG FG+ + ++NP LN G C +L+ + FVK + Q E E E + DG V +G + +V+ L +R+ G +L+V +G+ YG +F P YI +H++ S + A LDYVFAQF GI++ S Sbjct: 49 SNFVPVKKIPTGDGLFFQWVLCAAVWSVSLVVNIILGSPTFWPLAMLGGAIWATGNITVVPIVKTIGLGLGLLIWASFNLLIGWASSRFGWFGIDAEEVSNPTLNYCGAGCCLLSAVIFFFVKSDVHSQSSRPEEE--EPLLIDGC----------VNADGGTSSDDSWVDTLRPRTKRLVGSLLAVAAGLLYGTSFVPVLYIKNHAAHHDSHFTGASQFDLDYVFAQFSGIFLTS 272
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: A0A1S3QK96_SALSA (transmembrane protein 144-like n=12 Tax=Salmonidae TaxID=8015 RepID=A0A1S3QK96_SALSA) HSP 1 Score: 187 bits (474), Expect = 3.000e-54 Identity = 98/236 (41.53%), Postives = 142/236 (60.17%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K TGDG+FFQ+VLC+A+ + + +G+P F P AMLGGA+WA GN+ VPIVKTIGLGLGLL+W + N+++GWA+ RFG FG+ + ++NP LN G C +L+ + FVK + Q E + E + DG V +G +V+ L +R+ G +L+V +G+ YG++F P YI +H++ S + A LDYVFAQF GI++ S Sbjct: 72 SNFVPVKKISTGDGLFFQWVLCAAVWSVSLVVNIILGSPTFWPLAMLGGAIWATGNITVVPIVKTIGLGLGLLIWASFNLLIGWASSRFGWFGIDAEEVSNPTLNYCGAGCCLLSAVIFFFVKSDVHSQSSRPEEQ--EPLLTDGC----------VNADGVSSSDASWVDTLRPRTKRLVGSLLAVAAGLLYGSSFVPVLYIKNHAAHHDSRFTGASQFDLDYVFAQFSGIFLTS 295
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: A0A3B1J816_ASTMX (Transmembrane protein 144-like n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J816_ASTMX) HSP 1 Score: 185 bits (470), Expect = 1.250e-53 Identity = 100/248 (40.32%), Postives = 141/248 (56.85%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVK------------PTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K TGDG+FFQ+VLC+AI +A + + +PKF P AMLGGA+W+ GN+ VPIVKTIGLGLGLL+W + N++MGWA+ RFG FG++ + + P LN G +L+ V FVK P LVD V+ + + +V+ L ++R+ G V++VV+G+ YG++F P YI +H+ D PY+ A LDYVFAQF GI++ S Sbjct: 38 SNFVPVKKIDTGDGMFFQWVLCAAIWTVSLVANIILRSPKFWPLAMLGGAIWSTGNITVVPIVKTIGLGLGLLIWASFNLLMGWASSRFGWFGIEAETVAKPTLNYCGAGLCLLSAIVFFFVKTDVQRPTTSEETPLLVDST--------------------------VKSSPESLTDDSWVDMLSPVKKRLVGSVMAVVAGILYGSSFIPVLYIKNHTDDPGGPYYGASQFDLDYVFAQFSGIFLTS 259
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: A0A3B1J707_ASTMX (Transmembrane protein 144-like n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J707_ASTMX) HSP 1 Score: 185 bits (470), Expect = 1.350e-53 Identity = 100/248 (40.32%), Postives = 141/248 (56.85%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVK------------PTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K TGDG+FFQ+VLC+AI +A + + +PKF P AMLGGA+W+ GN+ VPIVKTIGLGLGLL+W + N++MGWA+ RFG FG++ + + P LN G +L+ V FVK P LVD V+ + + +V+ L ++R+ G V++VV+G+ YG++F P YI +H+ D PY+ A LDYVFAQF GI++ S Sbjct: 38 SNFVPVKKIDTGDGMFFQWVLCAAIWTVSLVANIILRSPKFWPLAMLGGAIWSTGNITVVPIVKTIGLGLGLLIWASFNLLMGWASSRFGWFGIEAETVAKPTLNYCGAGLCLLSAIVFFFVKTDVQRPTTSEETPLLVDST--------------------------VKSSPESLTDDSWVDMLSPVKKRLVGSVMAVVAGILYGSSFIPVLYIKNHTDDPGGPYYGASQFDLDYVFAQFSGIFLTS 259
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: UPI0003315AA6 (transmembrane protein 144 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003315AA6) HSP 1 Score: 184 bits (468), Expect = 1.880e-53 Identity = 97/236 (41.10%), Postives = 137/236 (58.05%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV LK + TGDG+F Q+VLC+AI + L + PKF PFAM+GG +WA GN+ VPI+KTIGLGLG+L+WG+ N + GWA+ RFG FG+ + + NP+LN +G A V++ V F+K + D + + + A+ ++ +V+KL + Q R+ G L+V+SG+ YG F P YI DHS S Y A +DYVFA F GI++ S Sbjct: 24 SNFVPLKKYDTGDGMFLQWVLCAAIWLVACVVNLILHCPKFWPFAMVGGCIWATGNIAVVPIIKTIGLGLGILIWGSFNTLTGWASSRFGWFGMDAEEVANPVLNYIGAALSVVSAFVFLFIKSEISDNTSSTD-------TTPLITEPAI----NANQDACTCPPYSWVDKLSQTQHRIVGCSLAVISGILYGCTFVPVIYIKDHSKRNDSIYAGASQNDVDYVFAHFSGIFLTS 248
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: A0A8C5LU72_9ANUR (Transmembrane protein 144 n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5LU72_9ANUR) HSP 1 Score: 184 bits (468), Expect = 2.430e-53 Identity = 95/236 (40.25%), Postives = 141/236 (59.75%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K F TGDG+FFQ++LC++I + + + PKF P AM+GG +WA GN+ VPIVKT+GLGLGLL+W + N++ GWA+ RFG+FG+ +V+ P LN G VL+ + FVK + + E E L + +E D E +V+KL +++R+ G ++++V+G+ YG++F P YI DHS +S Y + LDYVFA F GI++ S Sbjct: 35 SNFVPVKKFDTGDGMFFQWILCASIWIVSLVVNIILKCPKFWPLAMVGGCVWATGNITVVPIVKTVGLGLGLLIWASTNLLTGWASSRFGMFGIDPEVVERPYLNYAGAGLCVLSAIIFLFVKTDVKRSTSTSDSES-----------EPLLRTNINSQENSITD-ESWVDKLSPFKKRIIGSLMALVAGILYGSSFIPVLYIKDHSKRNESIYAGSSQFDLDYVFAHFSGIFITS 258
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Match: UPI001B7F606C (transmembrane protein 144-like isoform X1 n=6 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7F606C) HSP 1 Score: 186 bits (471), Expect = 2.880e-53 Identity = 103/236 (43.64%), Postives = 142/236 (60.17%), Query Frame = 1 Query: 1 SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGALWAVGNVCTVPIVKTIGLGLGLLLWGAANMIMGWATGRFGLFGLQRDVITNPLLNSLGVACVVLAMAVASFVKPTLVDQEEAGEGEGGEDGVEDGVGGEALGKGRGVEEEGKEDDGEMFVEKLPKWQQRVFGVVLSVVSGVFYGAAFTPAQYIIDHSSDRKSPYHNAPTGGLDYVFAQFVGIWMMS 708 SNFV +K F TGDG+FFQ++LC+AI I + + PKF P AMLGG +WA GN+ VPI+KT+GLGLG+L+WG+ N++MGWA+ RFG FG+ + + +PLLN G +L+ + FVK + Q A E L E+G D E +V+ L ++RV G L+VV+G+ YGAAF P YI +H+ ++ S Y A LDYVFAQF GI++ S Sbjct: 85 SNFVPVKKFDTGDGMFFQWILCAAIWIVSLIVNIILQCPKFWPLAMLGGVIWATGNITVVPILKTVGLGLGVLIWGSFNLLMGWASSRFGWFGIDPEEVAHPLLNYSGAGLSLLSALIFFFVKSEV--QRSASSTE---------TTPLLLDSRINNNEQGSLD--ESWVDNLTPKKKRVIGCALAVVAGLMYGAAFVPVLYIKNHAKNKGSRYVGASQFDLDYVFAQFSGIFLTS 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76286.17986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76286.17986.1 >prot_M-pyrifera_M_contig76286.17986.1 ID=prot_M-pyrifera_M_contig76286.17986.1|Name=mRNA_M-pyrifera_M_contig76286.17986.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp SNFVVLKGFKTGDGIFFQFVLCSAILFAGSIAYLSVGAPKFEPFAMLGGAback to top mRNA from alignment at M-pyrifera_M_contig76286:201..1031+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76286.17986.1 ID=mRNA_M-pyrifera_M_contig76286.17986.1|Name=mRNA_M-pyrifera_M_contig76286.17986.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=831bp|location=Sequence derived from alignment at M-pyrifera_M_contig76286:201..1031+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76286:201..1031+ >mRNA_M-pyrifera_M_contig76286.17986.1 ID=mRNA_M-pyrifera_M_contig76286.17986.1|Name=mRNA_M-pyrifera_M_contig76286.17986.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig76286:201..1031+ (Macrocystis pyrifera P11B4 male)back to top |