prot_M-pyrifera_M_contig76279.17983.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76279.17983.1
Unique Nameprot_M-pyrifera_M_contig76279.17983.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length144
Homology
BLAST of mRNA_M-pyrifera_M_contig76279.17983.1 vs. uniprot
Match: A0A7S4IGV9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IGV9_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 3.050e-6
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 0
Query:    1 ELKSRLQAKIQAHRDARNADSERPKKKRKAENEGRKTKAEKKAGRDKPSTLNKASSADSDTPSTGDDDLQFGTFKFEGDGAKPAYLERKK--KSPYALLKAAEKEKQRLADLKGKEGGKEELIERTAEKAMKKLQGEKVKDDPARL 144
            + K RL+ KIQ  R+ RN   E P+ K++  N+ ++     K  +    T+ + +S+D +       DL F TF +    AKPAYL  KK  K+ Y+LL+  E+EK+                E+  E A++K+QGEK+KDDP ++
Sbjct:  109 DAKERLKQKIQELREKRNVSDE-PEAKKQKTNQNKEENRANKVAKIVQDTITQDASSDVE-------DLNFSTFDYSDGKAKPAYLNIKKNQKATYSLLRKVEEEKKTXXXXXXXXXXXXXXQEKKIELALRKVQGEKIKDDPNKI 246          
BLAST of mRNA_M-pyrifera_M_contig76279.17983.1 vs. uniprot
Match: UPI0007120E3A (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007120E3A)

HSP 1 Score: 52.8 bits (125), Expect = 1.660e-5
Identity = 48/147 (32.65%), Postives = 87/147 (59.18%), Query Frame = 0
Query:    1 ELKSRLQAKIQAHRDARNADSERPKKKRKAENEGRKTKAEKKAGRDKPSTL-NKASSADSDTPSTGD--DDLQFGTFKFEGDGAKPAYLERKKKSPYALLKAAEKEKQRLADLKGKEGGKEELIERTAEKAMKKLQGEKVKDDPARL 144
            EL+ RL AKI+  R  R   + +  +K++++  G  +KAE K  R K + + NK SS +   PS  D   ++QFG  K + +    +   + +K  + LLK A+++++RL ++K  E G++E +    ++A++K++G K KD+PA+L
Sbjct:   57 ELRERLNAKIEMLRRNRIEAARKNDQKQRSKRNGGVSKAETKEKRVKTTNVENKPSSVEVIAPSVADVISNMQFGKIKTQKE-VDTSLRPKARKDIHTLLKQAQRKQERLKEMKSTEAGRKEALNLEMDEALRKVEGIKKKDNPAKL 202          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76279.17983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4IGV9_9EUKA3.050e-633.56Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
UPI0007120E3A1.660e-532.65hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029190Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainPFAMPF04935SURF6coord: 10..144
e-value: 3.0E-13
score: 50.0
IPR007019Surfeit locus 6PANTHERPTHR14369SURFEIT LOCUS PROTEIN 6coord: 1..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76279contigM-pyrifera_M_contig76279:541..1032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76279.17983.1mRNA_M-pyrifera_M_contig76279.17983.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76279 541..1032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76279.17983.1 ID=prot_M-pyrifera_M_contig76279.17983.1|Name=mRNA_M-pyrifera_M_contig76279.17983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
ELKSRLQAKIQAHRDARNADSERPKKKRKAENEGRKTKAEKKAGRDKPST
LNKASSADSDTPSTGDDDLQFGTFKFEGDGAKPAYLERKKKSPYALLKAA
EKEKQRLADLKGKEGGKEELIERTAEKAMKKLQGEKVKDDPARL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029190Rrp14/SURF6_C
IPR007019SURF6