mRNA_M-pyrifera_M_contig76229.17974.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76229.17974.1
Unique NamemRNA_M-pyrifera_M_contig76229.17974.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: A0A7S4HXN7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HXN7_9EUKA)

HSP 1 Score: 254 bits (648), Expect = 1.900e-77
Identity = 145/317 (45.74%), Postives = 194/317 (61.20%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEAEVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            G+G FG VYRG  L          +VAVK++ A+    E    F++FQQEVF+MS+L S   LV L GV+L P+  MV+E LP GDL+QLLHP+         + ++ A    I +++FPW+LRL  ALDIA G+  + +HSP I HRDLRSPNIF+   D  APVRAKVADFGL+R V P V G+L+TWQW+APE      +  +D  SD+YS  VC WE+ SR +PF EY+  P +  ++   G    D  K+K A+ +  LRPSLP R           + CP  +A +IE CW  D A+RP+ +EVV +LSD+
Sbjct:  184 GRGAFGIVYRGDWLGT--------QVAVKQLAAAYINDEA---FSEFQQEVFIMSQLRSQ-FLVALRGVTLIPKLMMVIEYLPCGDLFQLLHPSN--------DKSQIAHNERISKKDFPWSLRLMFALDIALGLRDLQTHSPPIAHRDLRSPNIFLCSLDETAPVRAKVADFGLARTVGPQVYGALDTWQWIAPEA---IFDSTFDLRSDIYSLGVCLWEIASRSYPFDEYVYHPSYS-IDNPNGDRILDQIKVKRAVVNEHLRPSLPPR----------EEECPEEYARIIEQCWQTDPAKRPTIQEVVTVLSDL 466          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: A0A7S4HXH5_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HXH5_9EUKA)

HSP 1 Score: 254 bits (648), Expect = 1.470e-73
Identity = 145/317 (45.74%), Postives = 194/317 (61.20%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEAEVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            G+G FG VYRG  L          +VAVK++ A+    E    F++FQQEVF+MS+L S   LV L GV+L P+  MV+E LP GDL+QLLHP+         + ++ A    I +++FPW+LRL  ALDIA G+  + +HSP I HRDLRSPNIF+   D  APVRAKVADFGL+R V P V G+L+TWQW+APE      +  +D  SD+YS  VC WE+ SR +PF EY+  P +  ++   G    D  K+K A+ +  LRPSLP R           + CP  +A +IE CW  D A+RP+ +EVV +LSD+
Sbjct:  184 GRGAFGIVYRGDWLGT--------QVAVKQLAAAYINDEA---FSEFQQEVFIMSQLRSQ-FLVALRGVTLIPKLMMVIEYLPCGDLFQLLHPSN--------DKSQIAHNERISKKDFPWSLRLMFALDIALGLRDLQTHSPPIAHRDLRSPNIFLCSLDETAPVRAKVADFGLARTVGPQVYGALDTWQWIAPEA---IFDSTFDLRSDIYSLGVCLWEIASRSYPFDEYVYHPSYS-IDNPNGDRILDQIKVKRAVVNEHLRPSLPPR----------EEECPEEYARIIEQCWQTDPAKRPTIQEVVTVLSDL 466          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: A0A7S4HR70_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HR70_9EUKA)

HSP 1 Score: 204 bits (519), Expect = 1.010e-56
Identity = 125/321 (38.94%), Postives = 177/321 (55.14%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVA-SGKEAEVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCR---LNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            G GGFG VY+G+L            VA+KE+++ SG+E     +F +F +EV+ MS L  HPNLV L G+++ P  RMV+E + GGDLY +LH  +               +S+         LRLR+ALDIAKGM  + + SP I+HRDLRSPNI +   D  A V AKVADFGL+  VAPS +G L +WQW APEV   +    YD ++D+YSF +  WE+ + G+PF+ Y  D R+ +     + T + +  +  +K AI    LRPS  +      + S            LI+ CWH ++A+RP F E+   L  +
Sbjct:   91 GSGGFGKVYKGSL--------DDEVVAIKELLSKSGEEENFAAMFEEFSREVYTMSSLD-HPNLVRLYGITINPL-RMVMEFVSGGDLYHILHSPQ--------------TLSL--------KLRLRVALDIAKGMRYLQNISPPIMHRDLRSPNILIEALDEEAEVIAKVADFGLAMSVAPSASGFLGSWQWHAPEVLD-SNSPFYDEAADIYSFGILLWEIFTGGYPFESYRGDDRYSKEVGKEDGTPIRHFRIQNIKQAIIRDNLRPSFDDSNNIPVHCS---------LQDLIQRCWHPEKAERPRFNEITKTLGSV 369          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: A0A151ZFK2_9MYCE (Non-specific serine/threonine protein kinase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZFK2_9MYCE)

HSP 1 Score: 193 bits (491), Expect = 1.000e-51
Identity = 124/320 (38.75%), Postives = 173/320 (54.06%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEA--EVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEY-MQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            GKG FG V++G L  + G++     VA+K ++ S  +   E+ + + +FQ+EVF+MS L  HPNLV L G+   P PRMV+E +PGGDLY+ L                             W L+LR+ LDIAKG+  M S SP I+HRDLRSPNIF+   D  APV AKVADFGLS+   PSV+G L+++QW+APE  G  ++E Y   +D YSFA+  +E+++   PF+EY ++D +F                   AI    LRP+LPE               PA    +IE CW  D  +RP F  ++  L ++
Sbjct: 1038 GKGAFGLVHKGKL--KDGTV-----VAIKSLILSDSQESDEMVEKYQEFQREVFIMSGLN-HPNLVKLFGLMFNP-PRMVMEFVPGGDLYKRLRSGP-----------------------MSWNLKLRLMLDIAKGLEYMQSLSPPIVHRDLRSPNIFIYSLDETAPVCAKVADFGLSQQSVPSVSGLLKSYQWMAPETIG-AEQETYTEKADTYSFAMILYEILTAKIPFEEYNLKDRQFI-----------------TAIREQNLRPTLPEET-------------PAKLKNIIELCWSGDAKKRPHFSIILRELQEL 1294          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: UPI00064518B4 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064518B4)

HSP 1 Score: 188 bits (478), Expect = 5.250e-50
Identity = 124/319 (38.87%), Postives = 169/319 (52.98%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEA--EVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            GKGGFG VY+G L  R G       +A+K ++    +   +  Q F +FQ+EVF+MS L  HPN+V L G+   P PRMV+E +P GDLY  L   +                    EE   W+L+ R+ LDIA+G++ M S SP ++HRDLRSPNIF+   D  APV AKVADFGLS+    SV G L ++QW+APE    T+EEGY   +D YSFA+  +E+++   PF EY            T L     H++  AI    LRP+LP  +             PA    +IE CW  D   RP F+ +V  + ++
Sbjct:  965 GKGGFGLVYKGRLQ-RTGE-----PIAIKSLIIEPDQEMEDTIQKFREFQREVFIMSSLD-HPNVVRLHGLMFNP-PRMVMEFVPMGDLYHRLQRTK--------------------EEPIKWSLKTRMMLDIARGLHYMQSLSPPVIHRDLRSPNIFLCSMDETAPVVAKVADFGLSQQSIHSVAGILLSYQWMAPEAIS-TQEEGYTEKADTYSFAMILYEILTAMVPFDEY-----------GTTL---KKHQVINAIRTKNLRPTLPPSV-------------PAKLRNVIELCWSGDPKNRPGFQYIVKEIEEL 1227          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: UPI000644F753 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F753)

HSP 1 Score: 186 bits (471), Expect = 4.630e-49
Identity = 118/319 (36.99%), Postives = 168/319 (52.66%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEA--EVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            GKG FG V++G ++       G + +A+K ++    +   E+ + F +FQ+EVF+MS+L  HPNLV LLG+   P PRMV+E +P GDLY+ L   EP                        W L+ R+ LDIA+G+  M + +P I+HRDLRSPNIF+      APV AK+ADFGLS+   PSV+G L++  W+APE  G  ++E Y   +D YSFA+  +E+++  FPF+EY    R                +   AI    LRP+LPE               P     +I+ CW  D  +RPSF  VV  L ++
Sbjct:  969 GKGAFGLVHKGKMVK------GGQVIAIKSLLLQENQETEEMVEKFQEFQREVFIMSDL-KHPNLVRLLGLMFSP-PRMVMEYIPMGDLYKRLRCGEP----------------------MSWNLKTRVMLDIARGLEYMQALNPPIVHRDLRSPNIFICSLHEDAPVVAKIADFGLSQQSVPSVSGLLKSIHWMAPETIG-AEQENYTEKADTYSFAMVLYEVLTSKFPFEEYSLKER----------------QFITAIREENLRPTLPEDT-------------PVKLRNVIQQCWSGDPKKRPSFGYVVRELEEL 1227          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: F0ZS49_DICPU (Non-specific serine/threonine protein kinase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZS49_DICPU)

HSP 1 Score: 186 bits (471), Expect = 4.650e-49
Identity = 121/319 (37.93%), Postives = 170/319 (53.29%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEAEVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLY-QLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDP-RFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            GKGGFG V++G L  + G++     VA+K ++  G + E+ + F +FQ+EVF+MS L  HPN+V L G+   P PRMV+E +P GDLY +LL  N P                        W+++LRI +DIAKG+  M + +P I+HRDLRSPNIF+V  +  APV AKVADFGLS+    SV+G L  ++W+APE  G  +EE Y   +D YSFA+  + + +   PF EY     +F  +                 I    LRP+LP             D  P+    +IE CW  D  +RP+F  VV  L ++
Sbjct:  992 GKGGFGLVHKGRL--KDGTV-----VAIKSLILEGGDEELIEKFQEFQREVFIMSSLN-HPNVVKLFGLMHNP-PRMVMEFVPCGDLYHRLLEKNHP----------------------IKWSVKLRIMIDIAKGIEYMQNQNPPIVHRDLRSPNIFLVSLNEDAPVCAKVADFGLSQQSVHSVSGLLGNFEWMAPEAIG-AQEESYTEKADTYSFAMILYNIYTGNHPFDEYKHGKIKFINM-----------------IREENLRPTLP-------------DDMPSRLRNVIEQCWSGDPKKRPAFSYVVKELEEL 1248          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: UPI0006450F43 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450F43)

HSP 1 Score: 185 bits (469), Expect = 8.290e-49
Identity = 122/319 (38.24%), Postives = 171/319 (53.61%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEA--EVQQIFTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            GKGGFG VY+G LL R G      ++AVK  + S  ++  E  Q F +FQ+EVF+MS L SHPN+V L G    P PR+V+E +P GDLY  L  N+              A  M      PWTL+ R+ LD+A G++ M S +P ++HRDLRSPNIF+   D  APV  K+ADFGLS+    SV G L ++QW+APE    ++ EGY   +D YSFA+  +E++S   PF EY +  +  ++ +              AI    LRP+LP  +             PA    +IE CW  + + RP F  ++  L ++
Sbjct: 1044 GKGGFGLVYKGKLL-RTGE-----QIAVKSSIVSPDQSNEETVQKFREFQREVFIMSSL-SHPNIVRLHGYMFNP-PRIVMEFVPKGDLYHYLKDNK--------------AAGMT----IPWTLQTRMMLDLANGLHYMQSLTPPVIHRDLRSPNIFLSSLDEDAPVVVKIADFGLSQQSIHSVAGILLSYQWMAPEAIS-SQTEGYTEKADTYSFAMILYEILSGLAPFDEYAETMKKFQVID--------------AIRTKHLRPTLPSTV-------------PAKLRNVIELCWSGEPSSRPEFPYIIKELEEL 1308          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: ROCO4_DICDI (Probable serine/threonine-protein kinase roco4 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ROCO4_DICDI)

HSP 1 Score: 182 bits (463), Expect = 5.460e-48
Identity = 124/319 (38.87%), Postives = 171/319 (53.61%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEAEVQQI--FTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            GKGGFG V++G L+ +  S+     VA+K ++    E E + I  F +FQ+EVF+MS L  HPN+V L G+   P PRMV+E +P GDLY  L      + A P++                W+++LR+ LDIA G+  M + +P I+HRDLRSPNIF+   D  APV AKVADFGLS+    SV+G L  +QW+APE  G  +EE Y   +D YSFA+  + +++   PF EY           S G +     K    I   GLRP++PE              CP     +IE CW  D  +RP F  +V  LS++
Sbjct: 1033 GKGGFGLVHKGRLV-KDKSV-----VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNP-PRMVMEFVPCGDLYHRLL-----DKAHPIK----------------WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG-AEEESYTEKADTYSFAMILYTILTGEGPFDEY-----------SYGKI-----KFINMIREEGLRPTIPED-------------CPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 1292          
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Match: A0A8J4PS68_9MYCE (Non-specific serine/threonine protein kinase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PS68_9MYCE)

HSP 1 Score: 176 bits (447), Expect = 7.340e-46
Identity = 118/319 (36.99%), Postives = 170/319 (53.29%), Query Frame = 1
Query:    1 GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEAEVQQI--FTDFQQEVFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDAPPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDLRSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGHTKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYPDLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQDRAQRPSFREVVLLLSDM 951
            G+G FG V++G L  + G++     VA+K ++    E   +++  F +FQ+EVF+MS +  HPNLV L G+   P PRMV+E +PGGDL+  +   + DE+               P   + W L+LR+ LDIAKG+  M S +P I+HRDLRSPNIF+   +  APV AKVADFGLS+   PSV+G L++  W+APE  G  ++E Y   +D YSFA+  +E+++   PF E+    R                +   AI    LRP+LPE               P     +IE CW  D  +RP F  VV  + ++
Sbjct:  998 GQGAFGLVHKGKL--KDGTI-----VAIKSLIVRDAEETQEKVEKFQEFQREVFIMSGMN-HPNLVKLYGLMFNP-PRMVMEFVPGGDLFNRVRALKFDEN---------------PVHHY-WNLKLRMMLDIAKGLEYMQSLNPPIVHRDLRSPNIFIHSCNEDAPVVAKVADFGLSQQSVPSVSGLLKSIHWMAPETIG-AEQETYTEKADTYSFAIILYEILTGKIPFDEFKFKER----------------QFITAIREQNLRPTLPEDT-------------PEKLRNVIELCWSGDPKKRPHFGYVVREIQEL 1261          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76229.17974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HXN7_9EUKA1.900e-7745.74Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A7S4HXH5_9EUKA1.470e-7345.74Hypothetical protein n=2 Tax=Vannella sp. CB-2014 ... [more]
A0A7S4HR70_9EUKA1.010e-5638.94Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A151ZFK2_9MYCE1.000e-5138.75Non-specific serine/threonine protein kinase n=1 T... [more]
UPI00064518B45.250e-5038.87hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI000644F7534.630e-4936.99hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F0ZS49_DICPU4.650e-4937.93Non-specific serine/threonine protein kinase n=1 T... [more]
UPI0006450F438.290e-4938.24hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
ROCO4_DICDI5.460e-4838.87Probable serine/threonine-protein kinase roco4 n=1... [more]
A0A8J4PS68_9MYCE7.340e-4636.99Non-specific serine/threonine protein kinase n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76229contigM-pyrifera_M_contig76229:48..1034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.0
Seed ortholog evalue2.6e-44
Seed eggNOG ortholog5786.XP_003290237.1
Preferred nameroco4
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0030587,GO:0031150,GO:0031153,GO:0031154,GO:0032502,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051703,GO:0051704,GO:0051716,GO:0065007,GO:0071704,GO:0090702,GO:0099120,GO:0140096,GO:1901564
EggNOG free text desc.C-terminal of Roc, COR, domain
EggNOG OGs3X9QB@554915,COG0515@1,KOG0192@2759
COG Functional cat.T
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
Exons2
Model size951
Cds size951
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816661.4836457-CDS-M-pyrifera_M_contig76229:47..4011622816661.4836457-CDS-M-pyrifera_M_contig76229:47..401Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76229 48..401 -
1692278104.7385943-CDS-M-pyrifera_M_contig76229:47..4011692278104.7385943-CDS-M-pyrifera_M_contig76229:47..401Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76229 48..401 -
1622816661.497866-CDS-M-pyrifera_M_contig76229:437..10341622816661.497866-CDS-M-pyrifera_M_contig76229:437..1034Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76229 438..1034 -
1692278104.751452-CDS-M-pyrifera_M_contig76229:437..10341692278104.751452-CDS-M-pyrifera_M_contig76229:437..1034Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76229 438..1034 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76229.17974.1prot_M-pyrifera_M_contig76229.17974.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76229 48..1034 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76229.17974.1

>prot_M-pyrifera_M_contig76229.17974.1 ID=prot_M-pyrifera_M_contig76229.17974.1|Name=mRNA_M-pyrifera_M_contig76229.17974.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=317bp
GKGGFGTVYRGTLLPRPGSLAGPREVAVKEVVASGKEAEVQQIFTDFQQE
VFLMSELGSHPNLVNLLGVSLQPRPRMVLELLPGGDLYQLLHPNEPDEDA
PPVEGAEEAAISMIPEEEFPWTLRLRIALDIAKGMYGMHSHSPAILHRDL
RSPNIFMVCRDAAAPVRAKVADFGLSRLVAPSVTGSLETWQWLAPEVQGH
TKEEGYDTSSDVYSFAVCCWELVSRGFPFQEYMQDPRFCRLNESTGLLYP
DLHKLKAAIAHGGLRPSLPERLAGEANASGEYDACPAPFAGLIESCWHQD
RAQRPSFREVVLLLSDM
back to top

mRNA from alignment at M-pyrifera_M_contig76229:48..1034-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76229.17974.1 ID=mRNA_M-pyrifera_M_contig76229.17974.1|Name=mRNA_M-pyrifera_M_contig76229.17974.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=987bp|location=Sequence derived from alignment at M-pyrifera_M_contig76229:48..1034- (Macrocystis pyrifera P11B4 male)
GGTAAGGGCGGCTTCGGCACCGTCTACCGCGGCACGCTGCTGCCCAGGCC CGGCTCGCTGGCAGGGCCGCGCGAGGTGGCCGTCAAGGAGGTGGTGGCCA GCGGCAAGGAGGCGGAGGTGCAGCAGATCTTCACCGACTTCCAGCAGGAG GTCTTCCTCATGTCGGAGCTGGGCTCGCACCCCAACCTCGTCAACCTGCT GGGCGTCAGCCTGCAGCCGCGGCCACGCATGGTGCTGGAGCTGCTGCCCG GCGGCGACCTCTACCAGCTGCTGCACCCGAACGAGCCCGACGAGGACGCA CCGCCCGTCGAGGGCGCCGAGGAGGCGGCCATCTCCATGATCCCGGAGGA AGAGTTTCCCTGGACCCTCCGCCTGCGCATTGCGCTCGACATTGCGAAGG GCATGTACGGCATGCACAGCCACTCGCCGGCCATCCTGCACCGCGACCTG CGCAGCCCCAACATCTTCATGGTGTGCCGCGACGCAGCGGCGCCGGTGCG TGCCAAGGTGGCAGACTTTGGCCTCTCGCGCCTCGTGGCGCCCTCGGTCA CCGGCTCGCTCGAGACGTGGCAGTGGCTGGCGCCCGAGGTGCAGGGCGTG AGGCCGCCGGCCGGCAGCGACGCTGAGGCAAAGCACACGAAGGAGGAGGG CTACGACACCAGCTCGGACGTCTACAGCTTCGCCGTCTGCTGCTGGGAGC TGGTCAGCCGCGGCTTTCCCTTCCAGGAGTACATGCAGGACCCGCGCTTC TGCAGGCTCAACGAGTCGACCGGCCTGCTCTACCCCGACCTGCACAAGCT CAAGGCCGCCATTGCGCACGGCGGCCTCCGCCCCTCGCTGCCCGAGCGGC TGGCGGGCGAGGCCAACGCCTCTGGCGAGTACGACGCATGCCCCGCGCCC TTCGCCGGCCTCATCGAGAGCTGCTGGCACCAGGACCGCGCCCAGCGGCC CTCCTTCCGCGAGGTGGTGCTGCTGCTCTCCGACATG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig76229:48..1034-

>mRNA_M-pyrifera_M_contig76229.17974.1 ID=mRNA_M-pyrifera_M_contig76229.17974.1|Name=mRNA_M-pyrifera_M_contig76229.17974.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1902bp|location=Sequence derived from alignment at M-pyrifera_M_contig76229:48..1034- (Macrocystis pyrifera P11B4 male)
GGTAAGGGCGGCTTCGGCACCGTCTACCGCGGCACGCTGCTGCCCAGGCC
CGGCTCGCTGGCAGGGCCGCGCGAGGTGGCCGTCAAGGAGGTGGTGGCCA
GCGGCAAGGAGGCGGAGGTGCAGCAGATCTTCACCGACTTCCAGCAGGAG
GTCTTCCTCATGTCGGAGCTGGGCTCGCACCCCAACCTCGTCAACCTGCT
GGGCGTCAGCCTGCAGCCGCGGCCACGCATGGTGCTGGAGCTGCTGCCCG
GCGGCGACCTCTACCAGCTGCTGCACCCGAACGAGCCCGACGAGGACGCA
CCGCCCGTCGAGGGCGCCGAGGAGGCGGCCATCTCCATGATCCCGGAGGA
AGAGTTTCCCTGGACCCTCCGCCTGCGCATTGCGCTCGACATTGCGAAGG
GCATGTACGGCATGCACAGCCACTCGCCGGCCATCCTGCACCGCGACCTG
CGCAGCCCCAACATCTTCATGGTGTGCCGCGACGCAGCGGCGCCGGTGCG
TGCCAAGGTGGCAGACTTTGGCCTCTCGCGCCTCGTGGCGCCCTCGGTCA
CCGGCTCGCTCGAGACGTGGCAGTGGCTGGCGCCCGAGGTGCAGGGCGGT
AAGGGCGGCTTCGGCACCGTCTACCGCGGCACGCTGCTGCCCAGGCCCGG
CTCGCTGGCAGGGCCGCGCGAGGTGGCCGTCAAGGAGGTGGTGGCCAGCG
GCAAGGAGGCGGAGGTGCAGCAGATCTTCACCGACTTCCAGCAGGAGGTC
TTCCTCATGTCGGAGCTGGGCTCGCACCCCAACCTCGTCAACCTGCTGGG
CGTCAGCCTGCAGCCGCGGCCACGCATGGTGCTGGAGCTGCTGCCCGGCG
GCGACCTCTACCAGCTGCTGCACCCGAACGAGCCCGACGAGGACGCACCG
CCCGTCGAGGGCGCCGAGGAGGCGGCCATCTCCATGATCCCGGAGGAAGA
GTTTCCCTGGACCCTCCGCCTGCGCATTGCGCTCGACATTGCGAAGGGCA
TGTACGGCATGCACAGCCACTCGCCGGCCATCCTGCACCGCGACCTGCGC
AGCCCCAACATCTTCATGGTGTGCCGCGACGCAGCGGCGCCGGTGCGTGC
CAAGGTGGCAGACTTTGGCCTCTCGCGCCTCGTGGCGCCCTCGGTCACCG
GCTCGCTCGAGACGTGGCAGTGGCTGGCGCCCGAGGTGCAGGGCCACACG
AAGGAGGAGGGCTACGACACCAGCTCGGACGTCTACAGCTTCGCCGTCTG
CTGCTGGGAGCTGGTCAGCCGCGGCTTTCCCTTCCAGGAGTACATGCAGG
ACCCGCGCTTCTGCAGGCTCAACGAGTCGACCGGCCTGCTCTACCCCGAC
CTGCACAAGCTCAAGGCCGCCATTGCGCACGGCGGCCTCCGCCCCTCGCT
GCCCGAGCGGCTGGCGGGCGAGGCCAACGCCTCTGGCGAGTACGACGCAT
GCCCCGCGCCCTTCGCCGGCCTCATCGAGAGCTGCTGGCACCAGGACCGC
GCCCAGCGGCCCTCCTTCCGCGAGGTGGTGCTGCTGCTCTCCGACATGCA
CACGAAGGAGGAGGGCTACGACACCAGCTCGGACGTCTACAGCTTCGCCG
TCTGCTGCTGGGAGCTGGTCAGCCGCGGCTTTCCCTTCCAGGAGTACATG
CAGGACCCGCGCTTCTGCAGGCTCAACGAGTCGACCGGCCTGCTCTACCC
CGACCTGCACAAGCTCAAGGCCGCCATTGCGCACGGCGGCCTCCGCCCCT
CGCTGCCCGAGCGGCTGGCGGGCGAGGCCAACGCCTCTGGCGAGTACGAC
GCATGCCCCGCGCCCTTCGCCGGCCTCATCGAGAGCTGCTGGCACCAGGA
CCGCGCCCAGCGGCCCTCCTTCCGCGAGGTGGTGCTGCTGCTCTCCGACA
TG
back to top